RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 PRRX2Q99811 253 aa14.32□□□□□ -0.12
TRAPPC9-204ENST00000518723 PLVAPQ9BX97 442 aa14.32□□□□□ -0.12
TRAPPC9-204ENST00000518723 BCAS3Q9H6U6 928 aa14.32□□□□□ -0.12
TRAPPC9-204ENST00000518723 EHMT1Q9H9B1 1298 aa14.32□□□□□ -0.12
TRAPPC9-204ENST00000518723 ZNF215Q9UL58 517 aaPredicted RBP14.32□□□□□ -0.12
TRAPPC9-204ENST00000518723 FRMPD4Q14CM0 1322 aa14.32□□□□□ -0.12
TRAPPC9-204ENST00000518723 CHRNA1P02708 482 aa14.31□□□□□ -0.12
TRAPPC9-204ENST00000518723 GTF2F1P35269 517 aaKnown RBP eCLIP14.31□□□□□ -0.12
TRAPPC9-204ENST00000518723 ADAM15Q13444 863 aa14.31□□□□□ -0.12
TRAPPC9-204ENST00000518723 LMBR1Q8WVP7 490 aa14.31□□□□□ -0.12
TRAPPC9-204ENST00000518723 P2RX5Q93086 422 aa14.31□□□□□ -0.12
TRAPPC9-204ENST00000518723 PHOX2BQ99453 314 aa14.31□□□□□ -0.12
TRAPPC9-204ENST00000518723 NRCAMQ92823 1304 aa14.31□□□□□ -0.12
TRAPPC9-204ENST00000518723 CFAP54Q96N23 3096 aa14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 LAMA4Q16363 1823 aa14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 PALM3A6NDB9 673 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 TMEM221A6NGB7 291 aa14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 SPATA31C2B4DYI2 1134 aa14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 M0R296 226 aa14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 ENPP3O14638 875 aa14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 LINC01565O15544 149 aa14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 GHRP10912 638 aa14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 SDSP20132 328 aa14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 MRPS9P82933 396 aaKnown RBP14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 ARHGAP4P98171 946 aa14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 MGAT3Q09327 533 aa14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 SEMA3FQ13275 785 aa14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 CAMK1Q14012 370 aa14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 BTG3Q14201 252 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 NAALADL2Q58DX5 795 aa14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 IFIT1BQ5T764 474 aaKnown RBP14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 TAF2Q6P1X5 1199 aa14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 TRIM67Q6ZTA4 783 aa14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 CYFIP1Q7L576 1253 aa14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 TRIM50Q86XT4 487 aa14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 PPP2R3CQ969Q6 453 aa14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 ZFP91Q96JP5 570 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 UBAC1Q9BSL1 405 aa14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 KRT23Q9C075 422 aa14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 MAD2L2Q9UI95 211 aa14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 PLAGL2Q9UPG8 496 aa14.3□□□□□ -0.12
TRAPPC9-204ENST00000518723 ZFHX2Q9C0A1 2572 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC9-204ENST00000518723 MYH6P13533 1939 aa14.29□□□□□ -0.12
TRAPPC9-204ENST00000518723 ATG2AQ2TAZ0 1938 aa14.29□□□□□ -0.12
TRAPPC9-204ENST00000518723 LOC730098B7Z3J9 87 aa14.29□□□□□ -0.12
TRAPPC9-204ENST00000518723 FIBPO43427 364 aa14.29□□□□□ -0.12
TRAPPC9-204ENST00000518723 ST18O60284 1047 aa14.29□□□□□ -0.12
TRAPPC9-204ENST00000518723 DGKIO75912 1065 aa14.29□□□□□ -0.12
TRAPPC9-204ENST00000518723 NDUFV1P49821 464 aa14.29□□□□□ -0.12
TRAPPC9-204ENST00000518723 COASYQ13057 564 aa14.29□□□□□ -0.12
TRAPPC9-204ENST00000518723 LPIN1Q14693 890 aa14.29□□□□□ -0.12
TRAPPC9-204ENST00000518723 CBX2Q14781 532 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC9-204ENST00000518723 SEC23AQ15436 765 aa14.29□□□□□ -0.12
TRAPPC9-204ENST00000518723 SLC35G1Q2M3R5 365 aa14.29□□□□□ -0.12
TRAPPC9-204ENST00000518723 IER5LQ5T953 404 aa14.29□□□□□ -0.12
TRAPPC9-204ENST00000518723 FCHSD1Q86WN1 690 aa14.29□□□□□ -0.12
TRAPPC9-204ENST00000518723 EFHBQ8N7U6 833 aa14.29□□□□□ -0.12
TRAPPC9-204ENST00000518723 SMRP1Q8NCR6 262 aa14.29□□□□□ -0.12
TRAPPC9-204ENST00000518723 PBXIP1Q96AQ6 731 aa14.29□□□□□ -0.12
TRAPPC9-204ENST00000518723 SENP7Q9BQF6 1050 aa14.29□□□□□ -0.12
TRAPPC9-204ENST00000518723 DSCC1Q9BVC3 393 aa14.29□□□□□ -0.12
TRAPPC9-204ENST00000518723 IGFLR1Q9H665 355 aa14.29□□□□□ -0.12
TRAPPC9-204ENST00000518723 RIOX1Q9H6W3 641 aa14.29□□□□□ -0.12
TRAPPC9-204ENST00000518723 CNNM2Q9H8M5 875 aa14.29□□□□□ -0.12
TRAPPC9-204ENST00000518723 ZXDAP98168 799 aa14.28□□□□□ -0.12
TRAPPC9-204ENST00000518723 IMMTQ16891 758 aaKnown RBP14.28□□□□□ -0.12
TRAPPC9-204ENST00000518723 DIEXFQ68CQ4 756 aaKnown RBP14.28□□□□□ -0.12
TRAPPC9-204ENST00000518723 RUFY4Q6ZNE9 571 aa14.28□□□□□ -0.12
TRAPPC9-204ENST00000518723 CRIPAKQ8N1N5 446 aa14.28□□□□□ -0.12
TRAPPC9-204ENST00000518723 RILPL2Q969X0 211 aa14.28□□□□□ -0.12
TRAPPC9-204ENST00000518723 ALG13Q9NP73 1137 aaKnown RBP14.28□□□□□ -0.12
TRAPPC9-204ENST00000518723 CLEC1BQ9P126 229 aa14.28□□□□□ -0.12
TRAPPC9-204ENST00000518723 MBLAC1A4D2B0 266 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC9-204ENST00000518723 DNAJB1P25685 340 aa14.27□□□□□ -0.13
TRAPPC9-204ENST00000518723 RRP1P56182 461 aaKnown RBP14.27□□□□□ -0.13
TRAPPC9-204ENST00000518723 TCF15Q12870 199 aa14.27□□□□□ -0.13
TRAPPC9-204ENST00000518723 HDAC1Q13547 482 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC9-204ENST00000518723 FBXO47Q5MNV8 452 aa14.27□□□□□ -0.13
TRAPPC9-204ENST00000518723 UTP14CQ5TAP6 766 aaKnown RBP14.27□□□□□ -0.13
TRAPPC9-204ENST00000518723 TSHZ1Q6ZSZ6 1077 aa14.27□□□□□ -0.13
TRAPPC9-204ENST00000518723 RSPH3Q86UC2 560 aa14.27□□□□□ -0.13
TRAPPC9-204ENST00000518723 HOMER1Q86YM7 354 aa14.27□□□□□ -0.13
TRAPPC9-204ENST00000518723 SUGP1Q8IWZ8 645 aaKnown RBP14.27□□□□□ -0.13
TRAPPC9-204ENST00000518723 CMTR2Q8IYT2 770 aaKnown RBP14.27□□□□□ -0.13
TRAPPC9-204ENST00000518723 FBXL6Q8N531 539 aa14.27□□□□□ -0.13
TRAPPC9-204ENST00000518723 SPPL3Q8TCT6 385 aa14.27□□□□□ -0.13
TRAPPC9-204ENST00000518723 PIGSQ96S52 555 aa14.27□□□□□ -0.13
TRAPPC9-204ENST00000518723 TELO2Q9Y4R8 837 aa14.27□□□□□ -0.13
TRAPPC9-204ENST00000518723 SUPT16HQ9Y5B9 1047 aaKnown RBP14.27□□□□□ -0.13
TRAPPC9-204ENST00000518723 MRPL42Q9Y6G3 142 aaKnown RBP14.27□□□□□ -0.13
TRAPPC9-204ENST00000518723 TTC3P53804 2025 aa14.27□□□□□ -0.13
TRAPPC9-204ENST00000518723 PNMA6FA0A0J9YX94 578 aa14.26□□□□□ -0.13
TRAPPC9-204ENST00000518723 RPLP2P05387 115 aaKnown RBP14.26□□□□□ -0.13
TRAPPC9-204ENST00000518723 ITGB1P05556 798 aa14.26□□□□□ -0.13
TRAPPC9-204ENST00000518723 XRRA1Q6P2D8 792 aa14.26□□□□□ -0.13
TRAPPC9-204ENST00000518723 ADGRD2Q7Z7M1 963 aa14.26□□□□□ -0.13
TRAPPC9-204ENST00000518723 GIMAP8Q8ND71 665 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC9-204ENST00000518723 LINC01599Q8WXQ3 324 aa14.26□□□□□ -0.13
TRAPPC9-204ENST00000518723 SQORQ9Y6N5 450 aa14.26□□□□□ -0.13
TRAPPC9-204ENST00000518723 CYTH3O43739 400 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms