RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 PUS7Q96PZ0 661 aaKnown RBP6.28□□□□□ -1.4
SQLE-202ENST00000518604 CD244Q9BZW8 370 aa6.28□□□□□ -1.4
SQLE-202ENST00000518604 DCP1AQ9NPI6 582 aaPredicted RBP6.28□□□□□ -1.4
SQLE-202ENST00000518604 KCNH7Q9NS40 1196 aa6.28□□□□□ -1.4
SQLE-202ENST00000518604 SIRT5Q9NXA8 310 aa6.28□□□□□ -1.4
SQLE-202ENST00000518604 B3GALT1Q9Y5Z6 326 aa6.28□□□□□ -1.4
SQLE-202ENST00000518604 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.28□□□□□ -1.4
SQLE-202ENST00000518604 IRS2Q9Y4H2 1338 aa6.27□□□□□ -1.41
SQLE-202ENST00000518604 TEX51A0A1B0GUA7 166 aa6.27□□□□□ -1.41
SQLE-202ENST00000518604 SEMA7AO75326 666 aa6.27□□□□□ -1.41
SQLE-202ENST00000518604 NCAM1P13591 858 aa6.27□□□□□ -1.41
SQLE-202ENST00000518604 ATP2A2P16615 1042 aaKnown RBP6.27□□□□□ -1.41
SQLE-202ENST00000518604 YBX3P16989 372 aaKnown RBP eCLIP6.27□□□□□ -1.419e-12■□□□□ 8.2
SQLE-202ENST00000518604 PTPN1P18031 435 aaKnown RBP6.27□□□□□ -1.41
SQLE-202ENST00000518604 LSSP48449 732 aa6.27□□□□□ -1.41
SQLE-202ENST00000518604 STRN3Q13033 797 aa6.27□□□□□ -1.41
SQLE-202ENST00000518604 ZNF174Q15697 407 aa6.27□□□□□ -1.41
SQLE-202ENST00000518604 BTBD8Q5XKL5 378 aa6.27□□□□□ -1.41
SQLE-202ENST00000518604 CC2D1AQ6P1N0 951 aaPredicted RBP6.27□□□□□ -1.41
SQLE-202ENST00000518604 ETV3LQ6ZN32 361 aa6.27□□□□□ -1.41
SQLE-202ENST00000518604 PRR23BQ6ZRT6 265 aa6.27□□□□□ -1.41
SQLE-202ENST00000518604 STRA8Q7Z7C7 330 aa6.27□□□□□ -1.41
SQLE-202ENST00000518604 C11orf74Q86VG3 221 aa6.27□□□□□ -1.41
SQLE-202ENST00000518604 PASD1Q8IV76 773 aa6.27□□□□□ -1.41
SQLE-202ENST00000518604 NXPE1Q8N323 547 aa6.27□□□□□ -1.41
SQLE-202ENST00000518604 EFHBQ8N7U6 833 aa6.27□□□□□ -1.41
SQLE-202ENST00000518604 ARRDC4Q8NCT1 418 aa6.27□□□□□ -1.41
SQLE-202ENST00000518604 YIPF4Q9BSR8 244 aa6.27□□□□□ -1.41
SQLE-202ENST00000518604 NSUN3Q9H649 340 aaKnown RBP6.27□□□□□ -1.41
SQLE-202ENST00000518604 GOLGA2P5Q9HBQ8 144 aa6.27□□□□□ -1.41
SQLE-202ENST00000518604 PCDH18Q9HCL0 1135 aa6.27□□□□□ -1.41
SQLE-202ENST00000518604 ACSS2Q9NR19 701 aa6.27□□□□□ -1.41
SQLE-202ENST00000518604 DTLQ9NZJ0 730 aa6.27□□□□□ -1.41
SQLE-202ENST00000518604 LRRC10BA6NIK2 292 aa6.26□□□□□ -1.41
SQLE-202ENST00000518604 ZNF891A8MT65 544 aaPredicted RBP6.26□□□□□ -1.41
SQLE-202ENST00000518604 FKBP9O95302 570 aa6.26□□□□□ -1.41
SQLE-202ENST00000518604 CYP17A1P05093 508 aa6.26□□□□□ -1.41
SQLE-202ENST00000518604 FAHP16930 419 aa6.26□□□□□ -1.41
SQLE-202ENST00000518604 PMLP29590 882 aa6.26□□□□□ -1.41
SQLE-202ENST00000518604 KPNA1P52294 538 aaPredicted RBP6.26□□□□□ -1.41
SQLE-202ENST00000518604 IL2P60568 153 aa6.26□□□□□ -1.41
SQLE-202ENST00000518604 HERVK_113P62684 666 aa6.26□□□□□ -1.41
SQLE-202ENST00000518604 PAN2Q504Q3 1202 aaKnown RBP6.26□□□□□ -1.41
SQLE-202ENST00000518604 RNF219Q5W0B1 726 aaPredicted RBP6.26□□□□□ -1.41
SQLE-202ENST00000518604 FKBP9P1Q75LS8 142 aa6.26□□□□□ -1.41
SQLE-202ENST00000518604 ZC3H18Q86VM9 953 aaKnown RBP6.26□□□□□ -1.41
SQLE-202ENST00000518604 DDX42Q86XP3 938 aaKnown RBP eCLIP6.26□□□□□ -1.41
SQLE-202ENST00000518604 FBXO15Q8NCQ5 510 aaPredicted RBP6.26□□□□□ -1.41
SQLE-202ENST00000518604 ATL2Q8NHH9 583 aa6.26□□□□□ -1.41
SQLE-202ENST00000518604 TOE1Q96GM8 510 aaKnown RBP6.26□□□□□ -1.41
SQLE-202ENST00000518604 DIRC2Q96SL1 478 aa6.26□□□□□ -1.41
SQLE-202ENST00000518604 OXSMQ9NWU1 459 aa6.26□□□□□ -1.41
SQLE-202ENST00000518604 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.26□□□□□ -1.41
SQLE-202ENST00000518604 APOBEC2Q9Y235 224 aaKnown RBP6.26□□□□□ -1.41
SQLE-202ENST00000518604 TELO2Q9Y4R8 837 aa6.26□□□□□ -1.41
SQLE-202ENST00000518604 SPO11Q9Y5K1 396 aa6.26□□□□□ -1.41
SQLE-202ENST00000518604 HCFC2Q9Y5Z7 792 aa6.26□□□□□ -1.41
SQLE-202ENST00000518604 FAM90A27PA6NNH2 459 aa6.25□□□□□ -1.41
SQLE-202ENST00000518604 ALG1L2C9J202 215 aa6.25□□□□□ -1.41
SQLE-202ENST00000518604 SCDO00767 359 aa6.25□□□□□ -1.41
SQLE-202ENST00000518604 BUB1BO60566 1050 aaPredicted RBP6.25□□□□□ -1.41
SQLE-202ENST00000518604 LTFP02788 710 aa6.25□□□□□ -1.41
SQLE-202ENST00000518604 ASGR2P07307 311 aa6.25□□□□□ -1.41
SQLE-202ENST00000518604 CDK11BP21127 795 aaKnown RBP6.25□□□□□ -1.41
SQLE-202ENST00000518604 FBLN1P23142 703 aa6.25□□□□□ -1.41
SQLE-202ENST00000518604 SDHAP31040 664 aa6.25□□□□□ -1.41
SQLE-202ENST00000518604 ZNF200P98182 395 aaPredicted RBP6.25□□□□□ -1.41
SQLE-202ENST00000518604 FAPQ12884 760 aa6.25□□□□□ -1.41
SQLE-202ENST00000518604 MLANAQ16655 118 aa6.25□□□□□ -1.41
SQLE-202ENST00000518604 TMEM132EQ6IEE7 984 aa6.25□□□□□ -1.41
SQLE-202ENST00000518604 LDHDQ86WU2 507 aa6.25□□□□□ -1.41
SQLE-202ENST00000518604 RBM12BQ8IXT5 1001 aaKnown RBP6.25□□□□□ -1.41
SQLE-202ENST00000518604 WDR66Q8TBY9 1149 aa6.25□□□□□ -1.41
SQLE-202ENST00000518604 CHTF18Q8WVB6 975 aa6.25□□□□□ -1.41
SQLE-202ENST00000518604 DDX11Q96FC9 970 aa6.25□□□□□ -1.41
SQLE-202ENST00000518604 MCOLN1Q9GZU1 580 aa6.25□□□□□ -1.41
SQLE-202ENST00000518604 PCIF1Q9H4Z3 704 aa6.25□□□□□ -1.41
SQLE-202ENST00000518604 RIC8BQ9NVN3 520 aa6.25□□□□□ -1.41
SQLE-202ENST00000518604 THG1LQ9NWX6 298 aaKnown RBP6.25□□□□□ -1.41
SQLE-202ENST00000518604 MYOCOSA0A1B0GUC4 107 aa6.24□□□□□ -1.41
SQLE-202ENST00000518604 NEMP1O14524 444 aa6.24□□□□□ -1.41
SQLE-202ENST00000518604 C4BPAP04003 597 aaKnown RBP6.24□□□□□ -1.41
SQLE-202ENST00000518604 PFKLP17858 780 aa6.24□□□□□ -1.41
SQLE-202ENST00000518604 ADCYAP1R1P41586 468 aa6.24□□□□□ -1.41
SQLE-202ENST00000518604 FNTBP49356 437 aa6.24□□□□□ -1.41
SQLE-202ENST00000518604 NKX3-2P78367 333 aa6.24□□□□□ -1.41
SQLE-202ENST00000518604 CACNB2Q08289 660 aaPredicted RBP6.24□□□□□ -1.41
SQLE-202ENST00000518604 SKOR2Q2VWA4 1001 aaPredicted RBP6.24□□□□□ -1.41
SQLE-202ENST00000518604 GPR158Q5T848 1215 aa6.24□□□□□ -1.41
SQLE-202ENST00000518604 CREB3L3Q68CJ9 461 aa6.24□□□□□ -1.41
SQLE-202ENST00000518604 MCTP1Q6DN14 999 aa6.24□□□□□ -1.41
SQLE-202ENST00000518604 KIAA1958Q8N8K9 716 aa6.24□□□□□ -1.41
SQLE-202ENST00000518604 GPR101Q96P66 508 aaPredicted RBP6.24□□□□□ -1.41
SQLE-202ENST00000518604 CNTD2Q9H8S5 307 aa6.24□□□□□ -1.41
SQLE-202ENST00000518604 MBD1Q9UIS9 605 aaPredicted RBP6.24□□□□□ -1.41
SQLE-202ENST00000518604 PCDHA5Q9Y5H7 936 aa6.24□□□□□ -1.41
SQLE-202ENST00000518604 PHLDB1Q86UU1 1377 aa6.23□□□□□ -1.41
SQLE-202ENST00000518604 ACOT7O00154 380 aa6.23□□□□□ -1.41
SQLE-202ENST00000518604 KCNK3O14649 394 aa6.23□□□□□ -1.41
SQLE-202ENST00000518604 GPR39O43194 453 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms