RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 TRPV6Q9H1D0 765 aa24.93■■□□□ 1.58
VEGFA-217ENST00000518538 ZNF215Q9UL58 517 aaPredicted RBP24.93■■□□□ 1.58
VEGFA-217ENST00000518538 FAM205CA6NFA0 338 aa24.92■■□□□ 1.58
VEGFA-217ENST00000518538 DDX39AO00148 427 aaKnown RBP24.92■■□□□ 1.58
VEGFA-217ENST00000518538 MSH4O15457 936 aa24.92■■□□□ 1.58
VEGFA-217ENST00000518538 SUPT20HL2P0C7V6 817 aa24.92■■□□□ 1.58
VEGFA-217ENST00000518538 CUL4AQ13619 759 aa24.92■■□□□ 1.58
VEGFA-217ENST00000518538 PPP4R3AQ6IN85 833 aa24.92■■□□□ 1.58
VEGFA-217ENST00000518538 TRIM50Q86XT4 487 aa24.92■■□□□ 1.58
VEGFA-217ENST00000518538 C7orf31Q8N865 590 aa24.92■■□□□ 1.58
VEGFA-217ENST00000518538 TRMT13Q9NUP7 481 aaKnown RBP24.92■■□□□ 1.58
VEGFA-217ENST00000518538 DDX25Q9UHL0 483 aaKnown RBP24.92■■□□□ 1.58
VEGFA-217ENST00000518538 EMSYQ7Z589 1322 aa24.91■■□□□ 1.58
VEGFA-217ENST00000518538 CCNE2O96020 404 aa24.91■■□□□ 1.58
VEGFA-217ENST00000518538 GJB2P29033 226 aa24.91■■□□□ 1.58
VEGFA-217ENST00000518538 SLC5A5Q92911 643 aa24.91■■□□□ 1.58
VEGFA-217ENST00000518538 UIMC1Q96RL1 719 aa24.91■■□□□ 1.58
VEGFA-217ENST00000518538 RIT2Q99578 217 aa24.91■■□□□ 1.58
VEGFA-217ENST00000518538 FOXP1Q9H334 677 aaPredicted RBP24.91■■□□□ 1.58
VEGFA-217ENST00000518538 HDAC6Q9UBN7 1215 aa24.91■■□□□ 1.58
VEGFA-217ENST00000518538 GTF2IRD1Q9UHL9 959 aa24.91■■□□□ 1.58
VEGFA-217ENST00000518538 TCEAL9Q9UHQ7 104 aa24.91■■□□□ 1.58
VEGFA-217ENST00000518538 SMC3Q9UQE7 1217 aa24.91■■□□□ 1.58
VEGFA-217ENST00000518538 LGR5O75473 907 aa24.9■■□□□ 1.58
VEGFA-217ENST00000518538 ATG7O95352 703 aa24.9■■□□□ 1.58
VEGFA-217ENST00000518538 RAG1P15918 1043 aa24.9■■□□□ 1.58
VEGFA-217ENST00000518538 MAGEA10P43363 369 aaPredicted RBP24.9■■□□□ 1.58
VEGFA-217ENST00000518538 ZNF746Q6NUN9 644 aaPredicted RBP24.9■■□□□ 1.58
VEGFA-217ENST00000518538 GDF15Q99988 308 aa24.9■■□□□ 1.58
VEGFA-217ENST00000518538 LBHD1Q9BQE6 289 aaPredicted RBP24.9■■□□□ 1.58
VEGFA-217ENST00000518538 SMARCAD1Q9H4L7 1026 aa24.9■■□□□ 1.58
VEGFA-217ENST00000518538 PCDH10Q9P2E7 1040 aa24.9■■□□□ 1.58
VEGFA-217ENST00000518538 LTBP2Q14767 1821 aa24.9■■□□□ 1.58
VEGFA-217ENST00000518538 SLC37A4O43826 429 aa24.89■■□□□ 1.58
VEGFA-217ENST00000518538 CCNT1O60563 726 aaKnown RBP24.89■■□□□ 1.58
VEGFA-217ENST00000518538 ITGB8P26012 769 aa24.89■■□□□ 1.58
VEGFA-217ENST00000518538 KRT76Q01546 638 aa24.89■■□□□ 1.58
VEGFA-217ENST00000518538 GDF6Q6KF10 455 aaPredicted RBP24.89■■□□□ 1.58
VEGFA-217ENST00000518538 ETNPPLQ8TBG4 499 aa24.89■■□□□ 1.58
VEGFA-217ENST00000518538 GLG1Q92896 1179 aa24.89■■□□□ 1.58
VEGFA-217ENST00000518538 PCYT2Q99447 389 aa24.89■■□□□ 1.58
VEGFA-217ENST00000518538 ERAP1Q9NZ08 941 aa24.89■■□□□ 1.58
VEGFA-217ENST00000518538 GAS7O60861 476 aa24.88■■□□□ 1.57
VEGFA-217ENST00000518538 TIMP1P01033 207 aa24.88■■□□□ 1.57
VEGFA-217ENST00000518538 MDM2Q00987 491 aaPredicted RBP24.88■■□□□ 1.57
VEGFA-217ENST00000518538 PTGISQ16647 500 aa24.88■■□□□ 1.57
VEGFA-217ENST00000518538 LRCH2Q5VUJ6 765 aa24.88■■□□□ 1.57
VEGFA-217ENST00000518538 CHRDL2Q6WN34 429 aa24.88■■□□□ 1.57
VEGFA-217ENST00000518538 SMAP1Q8IYB5 467 aaPredicted RBP24.88■■□□□ 1.57
VEGFA-217ENST00000518538 SNX21Q969T3 373 aa24.88■■□□□ 1.57
VEGFA-217ENST00000518538 TEKT3Q9BXF9 490 aa24.88■■□□□ 1.57
VEGFA-217ENST00000518538 AZI2Q9H6S1 392 aa24.88■■□□□ 1.57
VEGFA-217ENST00000518538 IGKV6D-21A0A0A0MT36 114 aa24.87■■□□□ 1.57
VEGFA-217ENST00000518538 K7ELQ4 463 aaPredicted RBP24.87■■□□□ 1.57
VEGFA-217ENST00000518538 PSMD10O75832 226 aa24.87■■□□□ 1.57
VEGFA-217ENST00000518538 SMIM10L2AP0DMW4 78 aa24.87■■□□□ 1.57
VEGFA-217ENST00000518538 SMIM10L2BP0DMW5 78 aa24.87■■□□□ 1.57
VEGFA-217ENST00000518538 MIS18BP1Q6P0N0 1132 aa24.87■■□□□ 1.57
VEGFA-217ENST00000518538 ABHD15Q6UXT9 468 aa24.87■■□□□ 1.57
VEGFA-217ENST00000518538 BADQ92934 168 aa24.87■■□□□ 1.57
VEGFA-217ENST00000518538 PRO3102Q9H379 93 aa24.87■■□□□ 1.57
VEGFA-217ENST00000518538 HIPK3Q9H422 1215 aa24.87■■□□□ 1.57
VEGFA-217ENST00000518538 NOD1Q9Y239 953 aa24.87■■□□□ 1.57
VEGFA-217ENST00000518538 CYP2C9P11712 490 aa24.86■■□□□ 1.57
VEGFA-217ENST00000518538 HOXC8P31273 242 aa24.86■■□□□ 1.57
VEGFA-217ENST00000518538 BMP8BP34820 402 aa24.86■■□□□ 1.57
VEGFA-217ENST00000518538 GNL2Q13823 731 aaKnown RBP24.86■■□□□ 1.57
VEGFA-217ENST00000518538 PLPPR4Q7Z2D5 763 aa24.86■■□□□ 1.57
VEGFA-217ENST00000518538 GJA10Q969M2 543 aa24.86■■□□□ 1.57
VEGFA-217ENST00000518538 FAM20AQ96MK3 541 aa24.86■■□□□ 1.57
VEGFA-217ENST00000518538 CTAGE1Q96RT6 745 aa24.86■■□□□ 1.57
VEGFA-217ENST00000518538 NOC4LQ9BVI4 516 aaKnown RBP24.86■■□□□ 1.57
VEGFA-217ENST00000518538 PPP1R12CQ9BZL4 782 aa24.86■■□□□ 1.57
VEGFA-217ENST00000518538 RNPEPQ9H4A4 650 aa24.86■■□□□ 1.57
VEGFA-217ENST00000518538 KCNMB3Q9NPA1 279 aa24.86■■□□□ 1.57
VEGFA-217ENST00000518538 C17orf102A2RUQ5 167 aa24.85■■□□□ 1.57
VEGFA-217ENST00000518538 TBX3O15119 743 aa24.85■■□□□ 1.57
VEGFA-217ENST00000518538 MARK3P27448 753 aa24.85■■□□□ 1.57
VEGFA-217ENST00000518538 STAT5BP51692 787 aa24.85■■□□□ 1.57
VEGFA-217ENST00000518538 FAM160B1Q5W0V3 765 aa24.85■■□□□ 1.57
VEGFA-217ENST00000518538 NOSTRINQ8IVI9 506 aa24.85■■□□□ 1.57
VEGFA-217ENST00000518538 AFAP1L1Q8TED9 768 aa24.85■■□□□ 1.57
VEGFA-217ENST00000518538 PCDHA10Q9Y5I2 948 aa24.85■■□□□ 1.57
VEGFA-217ENST00000518538 WDR64B1ANS9 1081 aa24.84■■□□□ 1.57
VEGFA-217ENST00000518538 KIF28PB7ZC32 967 aa24.84■■□□□ 1.57
VEGFA-217ENST00000518538 BACH1O14867 736 aa24.84■■□□□ 1.57
VEGFA-217ENST00000518538 PSAPP07602 524 aa24.84■■□□□ 1.57
VEGFA-217ENST00000518538 U2AF2P26368 475 aaKnown RBP eCLIP24.84■■□□□ 1.572e-48■□□□□ 11.2
VEGFA-217ENST00000518538 SFNP31947 248 aa24.84■■□□□ 1.57
VEGFA-217ENST00000518538 SLC26A2P50443 739 aa24.84■■□□□ 1.57
VEGFA-217ENST00000518538 HIC1Q14526 733 aa24.84■■□□□ 1.57
VEGFA-217ENST00000518538 MFSD5Q6N075 450 aa24.84■■□□□ 1.57
VEGFA-217ENST00000518538 POTEDQ86YR6 584 aa24.84■■□□□ 1.57
VEGFA-217ENST00000518538 CCDC60Q8IWA6 550 aaPredicted RBP24.84■■□□□ 1.57
VEGFA-217ENST00000518538 INTS4Q96HW7 963 aaKnown RBP24.84■■□□□ 1.57
VEGFA-217ENST00000518538 UNC45AQ9H3U1 944 aa24.84■■□□□ 1.57
VEGFA-217ENST00000518538 COLQQ9Y215 455 aaPredicted RBP24.84■■□□□ 1.57
VEGFA-217ENST00000518538 SAMM50Q9Y512 469 aa24.84■■□□□ 1.57
VEGFA-217ENST00000518538 GNAT1P11488 350 aa24.83■■□□□ 1.57
VEGFA-217ENST00000518538 JAK3P52333 1124 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms