RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 TMCO2Q7Z6W1 182 aaPredicted RBP12.14□□□□□ -0.47
PDGFRB-203ENST00000517660 DEFB128Q7Z7B8 93 aa12.14□□□□□ -0.47
PDGFRB-203ENST00000517660 NLRX1Q86UT6 975 aa12.14□□□□□ -0.47
PDGFRB-203ENST00000517660 CAGE1Q8TC20 777 aa12.14□□□□□ -0.47
PDGFRB-203ENST00000517660 SLC9A7Q96T83 725 aa12.14□□□□□ -0.47
PDGFRB-203ENST00000517660 SUGCTQ9HAC7 445 aa12.14□□□□□ -0.47
PDGFRB-203ENST00000517660 FAM86C1Q9NVL1 165 aa12.14□□□□□ -0.47
PDGFRB-203ENST00000517660 SCN5AQ14524 2016 aa12.13□□□□□ -0.47
PDGFRB-203ENST00000517660 KLF18A0A0U1RQI7 1052 aa12.13□□□□□ -0.47
PDGFRB-203ENST00000517660 NOP56O00567 594 aaKnown RBP12.13□□□□□ -0.47
PDGFRB-203ENST00000517660 REC8O95072 547 aa12.13□□□□□ -0.47
PDGFRB-203ENST00000517660 ZNF286BP0CG31 522 aa12.13□□□□□ -0.47
PDGFRB-203ENST00000517660 ACTN1P12814 892 aa12.13□□□□□ -0.47
PDGFRB-203ENST00000517660 PTPN5P54829 565 aa12.13□□□□□ -0.47
PDGFRB-203ENST00000517660 FGD1P98174 961 aa12.13□□□□□ -0.47
PDGFRB-203ENST00000517660 FUT2Q10981 343 aa12.13□□□□□ -0.47
PDGFRB-203ENST00000517660 SEMA3FQ13275 785 aa12.13□□□□□ -0.47
PDGFRB-203ENST00000517660 HEATR3Q7Z4Q2 680 aa12.13□□□□□ -0.47
PDGFRB-203ENST00000517660 TEX2Q8IWB9 1127 aa12.13□□□□□ -0.47
PDGFRB-203ENST00000517660 PHOSPHO2Q8TCD6 241 aa12.13□□□□□ -0.47
PDGFRB-203ENST00000517660 AFAP1L1Q8TED9 768 aa12.13□□□□□ -0.47
PDGFRB-203ENST00000517660 MFSD14AQ96MC6 490 aa12.13□□□□□ -0.47
PDGFRB-203ENST00000517660 CTAGE1Q96RT6 745 aa12.13□□□□□ -0.47
PDGFRB-203ENST00000517660 SENP7Q9BQF6 1050 aa12.13□□□□□ -0.47
PDGFRB-203ENST00000517660 C16orf70Q9BSU1 422 aa12.13□□□□□ -0.47
PDGFRB-203ENST00000517660 BCAS3Q9H6U6 928 aa12.13□□□□□ -0.47
PDGFRB-203ENST00000517660 V9GY48 417 aaPredicted RBP12.13□□□□□ -0.47
PDGFRB-203ENST00000517660 ZDBF2Q9HCK1 2354 aa12.13□□□□□ -0.47
PDGFRB-203ENST00000517660 SCN10AQ9Y5Y9 1956 aa12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 ZFHX2Q9C0A1 2572 aaPredicted RBP12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 SPDYE3A6NKU9 549 aa12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 GOLGA8AA7E2F4 631 aa12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 GOLGA8BA8MQT2 603 aa12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 H3BQ06 376 aaPredicted RBP12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 H3BRB1 525 aa12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 PARNO95453 639 aaKnown RBP12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 SELPP16109 830 aa12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 IRS1P35568 1242 aa12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 RBL2Q08999 1139 aa12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 PTK7Q13308 1070 aa12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 WWC2Q6AWC2 1192 aa12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 BLOC1S2Q6QNY1 142 aa12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 CYFIP1Q7L576 1253 aa12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 GIMAP8Q8ND71 665 aaPredicted RBP12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 DHX38Q92620 1227 aaKnown RBP12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 GPRASP2Q96D09 838 aa12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 CDHR1Q96JP9 859 aa12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 JAKMIP1Q96N16 626 aaKnown RBP12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 USP26Q9BXU7 913 aa12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 FTOQ9C0B1 505 aaKnown RBP eCLIP12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 TUT1Q9H6E5 874 aaKnown RBP12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 EHMT1Q9H9B1 1298 aa12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 FAM217BQ9NTX9 383 aaPredicted RBP12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 PCDHA6Q9UN73 950 aa12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 PCDHA8Q9Y5H6 950 aa12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 SNX14Q9Y5W7 946 aa12.12□□□□□ -0.47
PDGFRB-203ENST00000517660 CNTNAP5Q8WYK1 1306 aa12.11□□□□□ -0.47
PDGFRB-203ENST00000517660 SPTBN4Q9H254 2564 aa12.11□□□□□ -0.47
PDGFRB-203ENST00000517660 CCDC196A0A1B0GTZ2 297 aa12.11□□□□□ -0.47
PDGFRB-203ENST00000517660 hCG_1984214I3L0E3 225 aa12.11□□□□□ -0.47
PDGFRB-203ENST00000517660 EPB41L2O43491 1005 aaKnown RBP12.11□□□□□ -0.47
PDGFRB-203ENST00000517660 FOSP01100 380 aaPredicted RBP12.11□□□□□ -0.47
PDGFRB-203ENST00000517660 LGALS2P05162 132 aa12.11□□□□□ -0.47
PDGFRB-203ENST00000517660 CPA1P15085 419 aa12.11□□□□□ -0.47
PDGFRB-203ENST00000517660 ITGB5P18084 799 aa12.11□□□□□ -0.47
PDGFRB-203ENST00000517660 PSMA5P28066 241 aa12.11□□□□□ -0.47
PDGFRB-203ENST00000517660 NAPAP54920 295 aa12.11□□□□□ -0.47
PDGFRB-203ENST00000517660 UBE2SQ16763 222 aa12.11□□□□□ -0.47
PDGFRB-203ENST00000517660 PPP1R18Q6NYC8 613 aa12.11□□□□□ -0.47
PDGFRB-203ENST00000517660 Q6ZUG5 572 aa12.11□□□□□ -0.47
PDGFRB-203ENST00000517660 FBXL16Q8N461 479 aa12.11□□□□□ -0.47
PDGFRB-203ENST00000517660 ZNF713Q8N859 430 aaPredicted RBP12.11□□□□□ -0.47
PDGFRB-203ENST00000517660 GPR20Q99678 358 aa12.11□□□□□ -0.47
PDGFRB-203ENST00000517660 GLT8D2Q9H1C3 349 aa12.11□□□□□ -0.47
PDGFRB-203ENST00000517660 RIC8AQ9NPQ8 531 aa12.11□□□□□ -0.47
PDGFRB-203ENST00000517660 MUTYHQ9UIF7 546 aa12.11□□□□□ -0.47
PDGFRB-203ENST00000517660 NAP1L2Q9ULW6 460 aaPredicted RBP12.11□□□□□ -0.47
PDGFRB-203ENST00000517660 UBIAD1Q9Y5Z9 338 aa12.11□□□□□ -0.47
PDGFRB-203ENST00000517660 VPS13AQ96RL7 3174 aa12.11□□□□□ -0.47
PDGFRB-203ENST00000517660 DNAH14Q0VDD8 3507 aa12.11□□□□□ -0.47
PDGFRB-203ENST00000517660 TECTAO75443 2155 aa12.11□□□□□ -0.47
PDGFRB-203ENST00000517660 C17orf102A2RUQ5 167 aa12.1□□□□□ -0.47
PDGFRB-203ENST00000517660 MAFGO15525 162 aa12.1□□□□□ -0.47
PDGFRB-203ENST00000517660 CKBP12277 381 aa12.1□□□□□ -0.47
PDGFRB-203ENST00000517660 CDC27P30260 824 aa12.1□□□□□ -0.47
PDGFRB-203ENST00000517660 ADD1P35611 737 aaKnown RBP12.1□□□□□ -0.47
PDGFRB-203ENST00000517660 METAP2P50579 478 aaKnown RBP eCLIP12.1□□□□□ -0.47
PDGFRB-203ENST00000517660 ZNF200P98182 395 aaPredicted RBP12.1□□□□□ -0.47
PDGFRB-203ENST00000517660 APOBRQ0VD83 1088 aa12.1□□□□□ -0.47
PDGFRB-203ENST00000517660 GPNMBQ14956 572 aa12.1□□□□□ -0.47
PDGFRB-203ENST00000517660 TRIM71Q2Q1W2 868 aaKnown RBP12.1□□□□□ -0.47
PDGFRB-203ENST00000517660 HERC4Q5GLZ8 1057 aaPredicted RBP12.1□□□□□ -0.47
PDGFRB-203ENST00000517660 LRRC8DQ7L1W4 858 aa12.1□□□□□ -0.47
PDGFRB-203ENST00000517660 BRF1Q92994 677 aa12.1□□□□□ -0.47
PDGFRB-203ENST00000517660 JADE2Q9NQC1 790 aa12.1□□□□□ -0.47
PDGFRB-203ENST00000517660 BARHL2Q9NY43 387 aa12.1□□□□□ -0.47
PDGFRB-203ENST00000517660 MTUS1Q9ULD2 1270 aa12.1□□□□□ -0.47
PDGFRB-203ENST00000517660 PLXNA3P51805 1871 aa12.1□□□□□ -0.47
PDGFRB-203ENST00000517660 KMT2EQ8IZD2 1858 aa12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 SMCO2A6NFE2 343 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms