RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 AGPSO00116 658 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 EML1O00423 815 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 ENC1O14682 589 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 RIMBP2O15034 1052 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 ZNF185O15231 689 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 TGFB1I1O43294 461 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 SRGAP2O75044 1071 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 N4BP1O75113 896 aaKnown RBP3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 PSMD10O75832 226 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 GDF11O95390 407 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 SYF2O95926 243 aaKnown RBP3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 HLA-DOAP06340 250 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 CYP3A4P08684 503 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 TPM1P09493 284 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 PLA2G4BP0C869 781 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 SPDYE6P0CI01 402 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 TRIM21P19474 475 aaKnown RBP3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 RPA1P27694 616 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 ECHS1P30084 290 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 EIF4A3P38919 411 aaKnown RBP3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 PRKCIP41743 596 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 MTIF2P46199 727 aaKnown RBP3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 MCCD1P59942 119 aaPredicted RBP3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 SNAP25P60880 206 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 PSMC6P62333 389 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 CYP27A1Q02318 531 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 CACNB1Q02641 598 aaPredicted RBP3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 TBC1D8BQ0IIM8 1120 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 PPP2R5CQ13362 524 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 GIT2Q14161 759 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 BMS1Q14692 1282 aaKnown RBP3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 CASP8Q14790 479 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 EPHA7Q15375 998 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 AOC3Q16853 763 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 TMEM266Q2M3C6 531 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 SPDYE2Q495Y8 402 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 SOGA3Q5TF21 947 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 SYDE2Q5VT97 1194 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 KLHDC7AQ5VTJ3 777 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 MSL1Q68DK7 614 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 NFRKBQ6P4R8 1299 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 PPP4R3CPQ6ZMV5 832 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 SV2BQ7L1I2 683 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 DYMQ7RTS9 669 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 PODNQ7Z5L7 613 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 CATSPER3Q86XQ3 398 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 GPIHBP1Q8IV16 184 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 KIAA0825Q8IV33 1275 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 TEX2Q8IWB9 1127 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 FAM114A1Q8IWE2 563 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 MYOCDQ8IZQ8 938 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 MMGT1Q8N4V1 131 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 LRRC57Q8N9N7 239 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 BANK1Q8NDB2 785 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 NEK11Q8NG66 645 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 IL31RAQ8NI17 732 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 COG1Q8WTW3 980 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 SYN2Q92777 582 aaPredicted RBP3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 SLC5A5Q92911 643 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 SLC35C1Q96A29 364 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 CALML4Q96GE6 196 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 SH3GL2Q99962 352 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 NOC4LQ9BVI4 516 aaKnown RBP3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 NUP58Q9BVL2 599 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 LSM14BQ9BX40 385 aaKnown RBP3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 PACSIN1Q9BY11 444 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 EDEM3Q9BZQ6 932 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 NT5C3AQ9H0P0 336 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 IKZF4Q9H2S9 585 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 ZSWIM4Q9H7M6 989 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 ABCB6Q9NP58 842 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 PLCB1Q9NQ66 1216 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 OLFML3Q9NRN5 406 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 USP40Q9NVE5 1235 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 ARGLU1Q9NWB6 273 aaPredicted RBP3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 RNF216Q9NWF9 866 aaPredicted RBP3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 PSD3Q9NYI0 1048 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 SMARCAL1Q9NZC9 954 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 COL20A1Q9P218 1284 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 TMEM59LQ9UK28 342 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 ZBTB21Q9ULJ3 1066 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 PRR12Q9ULL5 1215 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 MYO6Q9UM54 1294 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 TRAF3IP3Q9Y228 551 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 LUC7L2Q9Y383 392 aaKnown RBP3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 COL4A3BPQ9Y5P4 624 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 PFASO15067 1338 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 TANC1Q9C0D5 1861 aa3.6□□□□□ -1.83
SCARNA20.6-201ENST00000517251 PCNTO95613 3336 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 BPTFQ12830 3046 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 A0A087X0T9 212 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 GTPBP10A4D1E9 387 aaKnown RBP3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 CTAGE15A4D2H0 777 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 ZSCAN5CA6NGD5 496 aaPredicted RBP3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 NPHP1O15259 732 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 EIF3DO15371 548 aaKnown RBP eCLIP3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 SLC16A3O15427 465 aaKnown RBP3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 NCK2O43639 380 aa3.59□□□□□ -1.83
SCARNA20.6-201ENST00000517251 PLA2G6O60733 806 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms