RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 UTP14CQ5TAP6 766 aaKnown RBP16.78■□□□□ 0.28
SCARNA20.5-201ENST00000516991 TAF2Q6P1X5 1199 aa16.78■□□□□ 0.28
SCARNA20.5-201ENST00000516991 RPAINQ86UA6 219 aa16.78■□□□□ 0.28
SCARNA20.5-201ENST00000516991 SRBD1Q8N5C6 995 aaKnown RBP16.78■□□□□ 0.28
SCARNA20.5-201ENST00000516991 YME1L1Q96TA2 773 aa16.78■□□□□ 0.28
SCARNA20.5-201ENST00000516991 PSTPIP2Q9H939 334 aa16.78■□□□□ 0.28
SCARNA20.5-201ENST00000516991 EHMT1Q9H9B1 1298 aa16.78■□□□□ 0.28
SCARNA20.5-201ENST00000516991 TCF7P36402 384 aaPredicted RBP16.77■□□□□ 0.28
SCARNA20.5-201ENST00000516991 RSPH3Q86UC2 560 aa16.77■□□□□ 0.28
SCARNA20.5-201ENST00000516991 TEX2Q8IWB9 1127 aa16.77■□□□□ 0.28
SCARNA20.5-201ENST00000516991 TOP1MTQ969P6 601 aa16.77■□□□□ 0.28
SCARNA20.5-201ENST00000516991 C17orf80Q9BSJ5 609 aa16.77■□□□□ 0.28
SCARNA20.5-201ENST00000516991 IFIH1Q9BYX4 1025 aaKnown RBP16.77■□□□□ 0.28
SCARNA20.5-201ENST00000516991 LSG1Q9H089 658 aaKnown RBP16.77■□□□□ 0.28
SCARNA20.5-201ENST00000516991 UBE2ZQ9H832 354 aaPredicted RBP16.77■□□□□ 0.28
SCARNA20.5-201ENST00000516991 SLC12A7Q9Y666 1083 aa16.77■□□□□ 0.28
SCARNA20.5-201ENST00000516991 RALGAPA2Q2PPJ7 1873 aa16.77■□□□□ 0.27
SCARNA20.5-201ENST00000516991 XIRP2A4UGR9 3374 aa16.77■□□□□ 0.27
SCARNA20.5-201ENST00000516991 NLRC5Q86WI3 1866 aa16.76■□□□□ 0.27
SCARNA20.5-201ENST00000516991 SPDYE3A6NKU9 549 aa16.76■□□□□ 0.27
SCARNA20.5-201ENST00000516991 SLC27A2O14975 620 aa16.76■□□□□ 0.27
SCARNA20.5-201ENST00000516991 RPLP2P05387 115 aaKnown RBP16.76■□□□□ 0.27
SCARNA20.5-201ENST00000516991 KCNA2P16389 499 aa16.76■□□□□ 0.27
SCARNA20.5-201ENST00000516991 MTMR1Q13613 665 aa16.76■□□□□ 0.27
SCARNA20.5-201ENST00000516991 TIGD5Q53EQ6 642 aa16.76■□□□□ 0.27
SCARNA20.5-201ENST00000516991 TMTC3Q6ZXV5 915 aa16.76■□□□□ 0.27
SCARNA20.5-201ENST00000516991 SEPT1Q8WYJ6 367 aa16.76■□□□□ 0.27
SCARNA20.5-201ENST00000516991 MRPL38Q96DV4 380 aaKnown RBP16.76■□□□□ 0.27
SCARNA20.5-201ENST00000516991 ESYT1Q9BSJ8 1104 aa16.76■□□□□ 0.27
SCARNA20.5-201ENST00000516991 ERAP1Q9NZ08 941 aa16.76■□□□□ 0.27
SCARNA20.5-201ENST00000516991 MAFGO15525 162 aa16.75■□□□□ 0.27
SCARNA20.5-201ENST00000516991 PPFIA1Q13136 1202 aa16.75■□□□□ 0.27
SCARNA20.5-201ENST00000516991 CREB3L3Q68CJ9 461 aa16.75■□□□□ 0.27
SCARNA20.5-201ENST00000516991 UBIAD1Q9Y5Z9 338 aa16.75■□□□□ 0.27
SCARNA20.5-201ENST00000516991 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.74■□□□□ 0.27
SCARNA20.5-201ENST00000516991 ITGB5P18084 799 aa16.74■□□□□ 0.27
SCARNA20.5-201ENST00000516991 RXRAP19793 462 aa16.74■□□□□ 0.27
SCARNA20.5-201ENST00000516991 IRX6P78412 446 aaPredicted RBP16.74■□□□□ 0.27
SCARNA20.5-201ENST00000516991 LEXMQ3ZCV2 418 aa16.74■□□□□ 0.27
SCARNA20.5-201ENST00000516991 EPC2Q52LR7 807 aa16.74■□□□□ 0.27
SCARNA20.5-201ENST00000516991 RNF20Q5VTR2 975 aa16.74■□□□□ 0.27
SCARNA20.5-201ENST00000516991 SYNE3Q6ZMZ3 975 aa16.74■□□□□ 0.27
SCARNA20.5-201ENST00000516991 HEATR3Q7Z4Q2 680 aa16.74■□□□□ 0.27
SCARNA20.5-201ENST00000516991 SGMS1Q86VZ5 419 aa16.74■□□□□ 0.27
SCARNA20.5-201ENST00000516991 FANCBQ8NB91 859 aa16.74■□□□□ 0.27
SCARNA20.5-201ENST00000516991 SMARCAD1Q9H4L7 1026 aa16.74■□□□□ 0.27
SCARNA20.5-201ENST00000516991 ANO2Q9NQ90 1003 aa16.74■□□□□ 0.27
SCARNA20.5-201ENST00000516991 TUBE1Q9UJT0 475 aa16.74■□□□□ 0.27
SCARNA20.5-201ENST00000516991 TELO2Q9Y4R8 837 aa16.74■□□□□ 0.27
SCARNA20.5-201ENST00000516991 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.73■□□□□ 0.27
SCARNA20.5-201ENST00000516991 MBLAC1A4D2B0 266 aaPredicted RBP16.73■□□□□ 0.27
SCARNA20.5-201ENST00000516991 H3BNC9 293 aa16.73■□□□□ 0.27
SCARNA20.5-201ENST00000516991 ATP9AO75110 1047 aa16.73■□□□□ 0.27
SCARNA20.5-201ENST00000516991 UPP2O95045 317 aa16.73■□□□□ 0.27
SCARNA20.5-201ENST00000516991 NECTIN1Q15223 517 aa16.73■□□□□ 0.27
SCARNA20.5-201ENST00000516991 GRIK4Q16099 956 aa16.73■□□□□ 0.27
SCARNA20.5-201ENST00000516991 UBE2SQ16763 222 aa16.73■□□□□ 0.27
SCARNA20.5-201ENST00000516991 PPP1R18Q6NYC8 613 aa16.73■□□□□ 0.27
SCARNA20.5-201ENST00000516991 MICU3Q86XE3 530 aa16.73■□□□□ 0.27
SCARNA20.5-201ENST00000516991 CMTR1Q8N1G2 835 aaKnown RBP16.73■□□□□ 0.27
SCARNA20.5-201ENST00000516991 GLG1Q92896 1179 aa16.73■□□□□ 0.27
SCARNA20.5-201ENST00000516991 TNPO1Q92973 898 aaKnown RBP16.73■□□□□ 0.27
SCARNA20.5-201ENST00000516991 JADE2Q9NQC1 790 aa16.73■□□□□ 0.27
SCARNA20.5-201ENST00000516991 RBM28Q9NW13 759 aaKnown RBP16.73■□□□□ 0.27
SCARNA20.5-201ENST00000516991 PCDHA6Q9UN73 950 aa16.73■□□□□ 0.27
SCARNA20.5-201ENST00000516991 RWDD3Q9Y3V2 267 aa16.73■□□□□ 0.27
SCARNA20.5-201ENST00000516991 PCDHA8Q9Y5H6 950 aa16.73■□□□□ 0.27
SCARNA20.5-201ENST00000516991 GSTTP1A0A1W2PQM5 241 aa16.72■□□□□ 0.27
SCARNA20.5-201ENST00000516991 RRN3P2A6NIE6 340 aa16.72■□□□□ 0.27
SCARNA20.5-201ENST00000516991 CHRNA1P02708 482 aa16.72■□□□□ 0.27
SCARNA20.5-201ENST00000516991 GHRP10912 638 aa16.72■□□□□ 0.27
SCARNA20.5-201ENST00000516991 MARK3P27448 753 aa16.72■□□□□ 0.27
SCARNA20.5-201ENST00000516991 MGAT3Q09327 533 aa16.72■□□□□ 0.27
SCARNA20.5-201ENST00000516991 GPM6BQ13491 265 aa16.72■□□□□ 0.27
SCARNA20.5-201ENST00000516991 PUS10Q3MIT2 529 aaKnown RBP16.72■□□□□ 0.27
SCARNA20.5-201ENST00000516991 RUFY4Q6ZNE9 571 aa16.72■□□□□ 0.27
SCARNA20.5-201ENST00000516991 TMEM192Q8IY95 271 aa16.72■□□□□ 0.27
SCARNA20.5-201ENST00000516991 IL17RAQ96F46 866 aa16.72■□□□□ 0.27
SCARNA20.5-201ENST00000516991 OSBPL7Q9BZF2 842 aa16.72■□□□□ 0.27
SCARNA20.5-201ENST00000516991 JPH1Q9HDC5 661 aaPredicted RBP16.72■□□□□ 0.27
SCARNA20.5-201ENST00000516991 CNTNAP5Q8WYK1 1306 aa16.71■□□□□ 0.27
SCARNA20.5-201ENST00000516991 hCG_1642624A0A1W2PR95 340 aa16.71■□□□□ 0.27
SCARNA20.5-201ENST00000516991 hCG_1984214I3L0E3 225 aa16.71■□□□□ 0.27
SCARNA20.5-201ENST00000516991 FOSP01100 380 aaPredicted RBP16.71■□□□□ 0.27
SCARNA20.5-201ENST00000516991 KCNA5P22460 613 aa16.71■□□□□ 0.27
SCARNA20.5-201ENST00000516991 LPIN1Q14693 890 aa16.71■□□□□ 0.27
SCARNA20.5-201ENST00000516991 APOA5Q6Q788 366 aa16.71■□□□□ 0.27
SCARNA20.5-201ENST00000516991 RAB11FIP4Q86YS3 637 aa16.71■□□□□ 0.27
SCARNA20.5-201ENST00000516991 CCDC82Q8N4S0 544 aa16.71■□□□□ 0.27
SCARNA20.5-201ENST00000516991 FIBCD1Q8N539 461 aa16.71■□□□□ 0.27
SCARNA20.5-201ENST00000516991 ZNF713Q8N859 430 aaPredicted RBP16.71■□□□□ 0.27
SCARNA20.5-201ENST00000516991 LRRC2Q9BYS8 371 aa16.71■□□□□ 0.27
SCARNA20.5-201ENST00000516991 AZI2Q9H6S1 392 aa16.71■□□□□ 0.27
SCARNA20.5-201ENST00000516991 SLC9A2Q9UBY0 812 aa16.71■□□□□ 0.27
SCARNA20.5-201ENST00000516991 NFASCO94856 1347 aa16.7■□□□□ 0.26
SCARNA20.5-201ENST00000516991 ADGRA3Q8IWK6 1321 aa16.7■□□□□ 0.26
SCARNA20.5-201ENST00000516991 TTC3P53804 2025 aa16.7■□□□□ 0.26
SCARNA20.5-201ENST00000516991 RB1P06400 928 aa16.7■□□□□ 0.26
SCARNA20.5-201ENST00000516991 CTNNB1P35222 781 aa16.7■□□□□ 0.26
SCARNA20.5-201ENST00000516991 NAPAP54920 295 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms