RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 CUL4AQ13619 759 aa29.4■■■□□ 2.3
DDR1-279ENST00000515529 EARS2Q5JPH6 523 aaKnown RBP29.4■■■□□ 2.3
DDR1-279ENST00000515529 LBHD1Q9BQE6 289 aaPredicted RBP29.4■■■□□ 2.3
DDR1-279ENST00000515529 FOXP1Q9H334 677 aaPredicted RBP29.4■■■□□ 2.3
DDR1-279ENST00000515529 TELO2Q9Y4R8 837 aa29.4■■■□□ 2.3
DDR1-279ENST00000515529 SCN10AQ9Y5Y9 1956 aa29.4■■■□□ 2.3
DDR1-279ENST00000515529 GSTTP1A0A1W2PQM5 241 aa29.39■■■□□ 2.3
DDR1-279ENST00000515529 FAM205CA6NFA0 338 aa29.39■■■□□ 2.3
DDR1-279ENST00000515529 EDIL3O43854 480 aa29.39■■■□□ 2.3
DDR1-279ENST00000515529 MARCH6O60337 910 aa29.39■■■□□ 2.3
DDR1-279ENST00000515529 GAS7O60861 476 aa29.39■■■□□ 2.3
DDR1-279ENST00000515529 PPP4R3AQ6IN85 833 aa29.39■■■□□ 2.3
DDR1-279ENST00000515529 PPP1R13LQ8WUF5 828 aa29.39■■■□□ 2.3
DDR1-279ENST00000515529 SNX21Q969T3 373 aa29.39■■■□□ 2.3
DDR1-279ENST00000515529 HAS3O00219 553 aa29.38■■■□□ 2.29
DDR1-279ENST00000515529 B4GALT4O60513 344 aa29.38■■■□□ 2.29
DDR1-279ENST00000515529 KRT76Q01546 638 aa29.38■■■□□ 2.29
DDR1-279ENST00000515529 LRCH2Q5VUJ6 765 aa29.38■■■□□ 2.29
DDR1-279ENST00000515529 TRIM50Q86XT4 487 aa29.38■■■□□ 2.29
DDR1-279ENST00000515529 MBOAT7Q96N66 472 aa29.38■■■□□ 2.29
DDR1-279ENST00000515529 RIT2Q99578 217 aa29.38■■■□□ 2.29
DDR1-279ENST00000515529 TEKT3Q9BXF9 490 aa29.38■■■□□ 2.29
DDR1-279ENST00000515529 TRPV6Q9H1D0 765 aa29.38■■■□□ 2.29
DDR1-279ENST00000515529 SMARCAD1Q9H4L7 1026 aa29.38■■■□□ 2.29
DDR1-279ENST00000515529 DHX15O43143 795 aaKnown RBP29.37■■■□□ 2.29
DDR1-279ENST00000515529 RAG1P15918 1043 aa29.37■■■□□ 2.29
DDR1-279ENST00000515529 ZNF746Q6NUN9 644 aaPredicted RBP29.37■■■□□ 2.29
DDR1-279ENST00000515529 SH3RF1Q7Z6J0 888 aa29.37■■■□□ 2.29
DDR1-279ENST00000515529 TRMT13Q9NUP7 481 aaKnown RBP29.37■■■□□ 2.29
DDR1-279ENST00000515529 HDAC6Q9UBN7 1215 aa29.37■■■□□ 2.29
DDR1-279ENST00000515529 SAMM50Q9Y512 469 aa29.37■■■□□ 2.29
DDR1-279ENST00000515529 BACH1O14867 736 aa29.36■■■□□ 2.29
DDR1-279ENST00000515529 CD4P01730 458 aa29.36■■■□□ 2.29
DDR1-279ENST00000515529 MCTP1Q6DN14 999 aa29.36■■■□□ 2.29
DDR1-279ENST00000515529 MIS18BP1Q6P0N0 1132 aa29.36■■■□□ 2.29
DDR1-279ENST00000515529 SESTD1Q86VW0 696 aa29.36■■■□□ 2.29
DDR1-279ENST00000515529 SLC5A5Q92911 643 aa29.36■■■□□ 2.29
DDR1-279ENST00000515529 ERAP1Q9NZ08 941 aa29.36■■■□□ 2.29
DDR1-279ENST00000515529 TRIM43BA6NCK2 446 aa29.35■■■□□ 2.29
DDR1-279ENST00000515529 KIAA0355O15063 1070 aa29.35■■■□□ 2.29
DDR1-279ENST00000515529 SLC37A4O43826 429 aa29.35■■■□□ 2.29
DDR1-279ENST00000515529 ATP2B1P20020 1258 aa29.35■■■□□ 2.29
DDR1-279ENST00000515529 FAM160B1Q5W0V3 765 aa29.35■■■□□ 2.29
DDR1-279ENST00000515529 LARP1BQ659C4 914 aaKnown RBP29.35■■■□□ 2.29
DDR1-279ENST00000515529 NOSTRINQ8IVI9 506 aa29.35■■■□□ 2.29
DDR1-279ENST00000515529 SMAP1Q8IYB5 467 aaPredicted RBP29.35■■■□□ 2.29
DDR1-279ENST00000515529 TRIM43Q96BQ3 446 aaPredicted RBP29.35■■■□□ 2.29
DDR1-279ENST00000515529 GTF2IRD1Q9UHL9 959 aa29.35■■■□□ 2.29
DDR1-279ENST00000515529 NOL7Q9UMY1 257 aaKnown RBP29.35■■■□□ 2.29
DDR1-279ENST00000515529 EMSYQ7Z589 1322 aa29.35■■■□□ 2.29
DDR1-279ENST00000515529 BAG4O95429 457 aaKnown RBP29.34■■■□□ 2.29
DDR1-279ENST00000515529 CCNE2O96020 404 aa29.34■■■□□ 2.29
DDR1-279ENST00000515529 PTGISQ16647 500 aa29.34■■■□□ 2.29
DDR1-279ENST00000515529 FAM20AQ96MK3 541 aa29.34■■■□□ 2.29
DDR1-279ENST00000515529 TBX21Q9UL17 535 aa29.34■■■□□ 2.29
DDR1-279ENST00000515529 DNAH12Q6ZR08 3092 aa29.34■■■□□ 2.29
DDR1-279ENST00000515529 WDR64B1ANS9 1081 aa29.33■■■□□ 2.29
DDR1-279ENST00000515529 LGR5O75473 907 aa29.33■■■□□ 2.29
DDR1-279ENST00000515529 PSAPP07602 524 aa29.33■■■□□ 2.29
DDR1-279ENST00000515529 SMIM10L2AP0DMW4 78 aa29.33■■■□□ 2.29
DDR1-279ENST00000515529 SMIM10L2BP0DMW5 78 aa29.33■■■□□ 2.29
DDR1-279ENST00000515529 PDCP20941 246 aa29.33■■■□□ 2.29
DDR1-279ENST00000515529 MARK3P27448 753 aa29.33■■■□□ 2.29
DDR1-279ENST00000515529 STAT5BP51692 787 aa29.33■■■□□ 2.29
DDR1-279ENST00000515529 ETNPPLQ8TBG4 499 aa29.33■■■□□ 2.29
DDR1-279ENST00000515529 TNPO1Q92973 898 aaKnown RBP29.33■■■□□ 2.29
DDR1-279ENST00000515529 INTS4Q96HW7 963 aaKnown RBP29.33■■■□□ 2.29
DDR1-279ENST00000515529 PCDHA10Q9Y5I2 948 aa29.33■■■□□ 2.29
DDR1-279ENST00000515529 C17orf102A2RUQ5 167 aa29.32■■■□□ 2.28
DDR1-279ENST00000515529 TBX3O15119 743 aa29.32■■■□□ 2.28
DDR1-279ENST00000515529 CHMP2AO43633 222 aa29.32■■■□□ 2.28
DDR1-279ENST00000515529 ATG7O95352 703 aa29.32■■■□□ 2.28
DDR1-279ENST00000515529 HSP90AA1P07900 732 aaKnown RBP29.32■■■□□ 2.28
DDR1-279ENST00000515529 GNAT1P11488 350 aa29.32■■■□□ 2.28
DDR1-279ENST00000515529 MAGEA10P43363 369 aaPredicted RBP29.32■■■□□ 2.28
DDR1-279ENST00000515529 MDM2Q00987 491 aaPredicted RBP29.32■■■□□ 2.28
DDR1-279ENST00000515529 GDF6Q6KF10 455 aaPredicted RBP29.32■■■□□ 2.28
DDR1-279ENST00000515529 ABHD15Q6UXT9 468 aa29.32■■■□□ 2.28
DDR1-279ENST00000515529 GJA10Q969M2 543 aa29.32■■■□□ 2.28
DDR1-279ENST00000515529 PPP1R12CQ9BZL4 782 aa29.32■■■□□ 2.28
DDR1-279ENST00000515529 HIPK3Q9H422 1215 aa29.32■■■□□ 2.28
DDR1-279ENST00000515529 CEP290O15078 2479 aa29.32■■■□□ 2.28
DDR1-279ENST00000515529 CYP2C9P11712 490 aa29.31■■■□□ 2.28
DDR1-279ENST00000515529 SFNP31947 248 aa29.31■■■□□ 2.28
DDR1-279ENST00000515529 JAK3P52333 1124 aa29.31■■■□□ 2.28
DDR1-279ENST00000515529 PLPPR4Q7Z2D5 763 aa29.31■■■□□ 2.28
DDR1-279ENST00000515529 POTEDQ86YR6 584 aa29.31■■■□□ 2.28
DDR1-279ENST00000515529 SLFN12Q8IYM2 578 aa29.31■■■□□ 2.28
DDR1-279ENST00000515529 CCDC155Q8N6L0 562 aa29.31■■■□□ 2.28
DDR1-279ENST00000515529 ZNF302Q9NR11 478 aa29.31■■■□□ 2.28
DDR1-279ENST00000515529 FOXD4L1Q9NU39 408 aa29.31■■■□□ 2.28
DDR1-279ENST00000515529 NEMFO60524 1076 aa29.3■■■□□ 2.28
DDR1-279ENST00000515529 PSMD10O75832 226 aa29.3■■■□□ 2.28
DDR1-279ENST00000515529 TIMP1P01033 207 aa29.3■■■□□ 2.28
DDR1-279ENST00000515529 U2AF2P26368 475 aaKnown RBP eCLIP29.3■■■□□ 2.28
DDR1-279ENST00000515529 SLC26A2P50443 739 aa29.3■■■□□ 2.28
DDR1-279ENST00000515529 CALCRLQ16602 461 aa29.3■■■□□ 2.28
DDR1-279ENST00000515529 SWSAP1Q6NVH7 229 aa29.3■■■□□ 2.28
DDR1-279ENST00000515529 CHRDL2Q6WN34 429 aa29.3■■■□□ 2.28
DDR1-279ENST00000515529 MIER3Q7Z3K6 550 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms