RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 GPRASP2Q96D09 838 aa21.18■□□□□ 0.98
SPOP-220ENST00000515508 LRFN3Q9BTN0 628 aa21.18■□□□□ 0.98
SPOP-220ENST00000515508 IFIH1Q9BYX4 1025 aaKnown RBP21.18■□□□□ 0.98
SPOP-220ENST00000515508 H3BNC9 293 aa21.17■□□□□ 0.98
SPOP-220ENST00000515508 KCNA5P22460 613 aa21.17■□□□□ 0.98
SPOP-220ENST00000515508 GNAQP50148 359 aa21.17■□□□□ 0.98
SPOP-220ENST00000515508 ARHGAP4P98171 946 aa21.17■□□□□ 0.98
SPOP-220ENST00000515508 PTPROQ16827 1216 aa21.17■□□□□ 0.98
SPOP-220ENST00000515508 TIGD5Q53EQ6 642 aa21.17■□□□□ 0.98
SPOP-220ENST00000515508 UTP14CQ5TAP6 766 aaKnown RBP21.17■□□□□ 0.98
SPOP-220ENST00000515508 NLRX1Q86UT6 975 aa21.17■□□□□ 0.98
SPOP-220ENST00000515508 CD320Q9NPF0 282 aa21.17■□□□□ 0.98
SPOP-220ENST00000515508 UPP2O95045 317 aa21.16■□□□□ 0.98
SPOP-220ENST00000515508 PLEKHA8P1O95397 391 aa21.16■□□□□ 0.98
SPOP-220ENST00000515508 KCNA2P16389 499 aa21.16■□□□□ 0.98
SPOP-220ENST00000515508 TCF7P36402 384 aaPredicted RBP21.16■□□□□ 0.98
SPOP-220ENST00000515508 SP4Q02446 784 aa21.16■□□□□ 0.98
SPOP-220ENST00000515508 TAF2Q6P1X5 1199 aa21.16■□□□□ 0.98
SPOP-220ENST00000515508 CASC1Q6TDU7 716 aa21.16■□□□□ 0.98
SPOP-220ENST00000515508 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.16■□□□□ 0.98
SPOP-220ENST00000515508 CDHR1Q96JP9 859 aa21.16■□□□□ 0.98
SPOP-220ENST00000515508 C11orf16Q9NQ32 467 aa21.16■□□□□ 0.98
SPOP-220ENST00000515508 SH2B2O14492 632 aaPredicted RBP21.15■□□□□ 0.98
SPOP-220ENST00000515508 PRC1O43663 620 aa21.15■□□□□ 0.98
SPOP-220ENST00000515508 ATP9AO75110 1047 aa21.15■□□□□ 0.98
SPOP-220ENST00000515508 CHRNA1P02708 482 aa21.15■□□□□ 0.98
SPOP-220ENST00000515508 TMEM31Q5JXX7 168 aa21.15■□□□□ 0.98
SPOP-220ENST00000515508 FAM178BQ8IXR5 827 aa21.15■□□□□ 0.98
SPOP-220ENST00000515508 TMEM192Q8IY95 271 aa21.15■□□□□ 0.98
SPOP-220ENST00000515508 SRBD1Q8N5C6 995 aaKnown RBP21.15■□□□□ 0.98
SPOP-220ENST00000515508 NEK9Q8TD19 979 aa21.15■□□□□ 0.98
SPOP-220ENST00000515508 TMEM87BQ96K49 555 aa21.15■□□□□ 0.98
SPOP-220ENST00000515508 EHMT1Q9H9B1 1298 aa21.15■□□□□ 0.98
SPOP-220ENST00000515508 ARIH1Q9Y4X5 557 aaPredicted RBP21.15■□□□□ 0.98
SPOP-220ENST00000515508 GPR37L1O60883 481 aa21.14■□□□□ 0.97
SPOP-220ENST00000515508 ITGB5P18084 799 aa21.14■□□□□ 0.97
SPOP-220ENST00000515508 MCM5P33992 734 aa21.14■□□□□ 0.97
SPOP-220ENST00000515508 MGAT3Q09327 533 aa21.14■□□□□ 0.97
SPOP-220ENST00000515508 GPM6BQ13491 265 aa21.14■□□□□ 0.97
SPOP-220ENST00000515508 COL19A1Q14993 1142 aa21.14■□□□□ 0.97
SPOP-220ENST00000515508 RUFY4Q6ZNE9 571 aa21.14■□□□□ 0.97
SPOP-220ENST00000515508 TMTC2Q8N394 836 aa21.14■□□□□ 0.97
SPOP-220ENST00000515508 FAM122AQ96E09 287 aa21.14■□□□□ 0.97
SPOP-220ENST00000515508 PSTPIP2Q9H939 334 aa21.14■□□□□ 0.97
SPOP-220ENST00000515508 RC3H2Q9HBD1 1191 aaKnown RBP21.14■□□□□ 0.97
SPOP-220ENST00000515508 SUPT16HQ9Y5B9 1047 aaKnown RBP21.14■□□□□ 0.97
SPOP-220ENST00000515508 MBLAC1A4D2B0 266 aaPredicted RBP21.13■□□□□ 0.97
SPOP-220ENST00000515508 PI4K2BG5E9Z4 385 aa21.13■□□□□ 0.97
SPOP-220ENST00000515508 LINC00271P0C7V0 271 aa21.13■□□□□ 0.97
SPOP-220ENST00000515508 IL9P15248 144 aa21.13■□□□□ 0.97
SPOP-220ENST00000515508 LIFRP42702 1097 aa21.13■□□□□ 0.97
SPOP-220ENST00000515508 PPFIA1Q13136 1202 aa21.13■□□□□ 0.97
SPOP-220ENST00000515508 COL9A3Q14050 684 aaPredicted RBP21.13■□□□□ 0.97
SPOP-220ENST00000515508 BANK1Q8NDB2 785 aa21.13■□□□□ 0.97
SPOP-220ENST00000515508 SEPT1Q8WYJ6 367 aa21.13■□□□□ 0.97
SPOP-220ENST00000515508 ERAP1Q9NZ08 941 aa21.13■□□□□ 0.97
SPOP-220ENST00000515508 TUBE1Q9UJT0 475 aa21.13■□□□□ 0.97
SPOP-220ENST00000515508 UBIAD1Q9Y5Z9 338 aa21.13■□□□□ 0.97
SPOP-220ENST00000515508 GSTTP1A0A1W2PQM5 241 aa21.12■□□□□ 0.97
SPOP-220ENST00000515508 GRXCR2A6NFK2 248 aa21.12■□□□□ 0.97
SPOP-220ENST00000515508 CCDC69A6NI79 296 aa21.12■□□□□ 0.97
SPOP-220ENST00000515508 C5orf67F2Z3F1 127 aa21.12■□□□□ 0.97
SPOP-220ENST00000515508 CALM1P0DP23 149 aa21.12■□□□□ 0.97
SPOP-220ENST00000515508 CALM2P0DP24 149 aa21.12■□□□□ 0.97
SPOP-220ENST00000515508 CALM3P0DP25 149 aa21.12■□□□□ 0.97
SPOP-220ENST00000515508 GHRP10912 638 aa21.12■□□□□ 0.97
SPOP-220ENST00000515508 MTMR1Q13613 665 aa21.12■□□□□ 0.97
SPOP-220ENST00000515508 LPIN1Q14693 890 aa21.12■□□□□ 0.97
SPOP-220ENST00000515508 GRIK4Q16099 956 aa21.12■□□□□ 0.97
SPOP-220ENST00000515508 PUS10Q3MIT2 529 aaKnown RBP21.12■□□□□ 0.97
SPOP-220ENST00000515508 PTCRAQ6ISU1 281 aaPredicted RBP21.12■□□□□ 0.97
SPOP-220ENST00000515508 NFXL1Q6ZNB6 911 aa21.12■□□□□ 0.97
SPOP-220ENST00000515508 CMTR1Q8N1G2 835 aaKnown RBP21.12■□□□□ 0.97
SPOP-220ENST00000515508 PABPC5Q96DU9 382 aaKnown RBP21.12■□□□□ 0.97
SPOP-220ENST00000515508 LSG1Q9H089 658 aaKnown RBP21.12■□□□□ 0.97
SPOP-220ENST00000515508 HCN4Q9Y3Q4 1203 aa21.12■□□□□ 0.97
SPOP-220ENST00000515508 TTC3P53804 2025 aa21.12■□□□□ 0.97
SPOP-220ENST00000515508 ADGRA3Q8IWK6 1321 aa21.11■□□□□ 0.97
SPOP-220ENST00000515508 MAFGO15525 162 aa21.11■□□□□ 0.97
SPOP-220ENST00000515508 RXRAP19793 462 aa21.11■□□□□ 0.97
SPOP-220ENST00000515508 UBE2SQ16763 222 aa21.11■□□□□ 0.97
SPOP-220ENST00000515508 TCEAL5Q5H9L2 206 aa21.11■□□□□ 0.97
SPOP-220ENST00000515508 MARCH8Q5T0T0 291 aa21.11■□□□□ 0.97
SPOP-220ENST00000515508 RSPH3Q86UC2 560 aa21.11■□□□□ 0.97
SPOP-220ENST00000515508 GJD3Q8N144 294 aa21.11■□□□□ 0.97
SPOP-220ENST00000515508 IL17RAQ96F46 866 aa21.11■□□□□ 0.97
SPOP-220ENST00000515508 NSUN3Q9H649 340 aaKnown RBP21.11■□□□□ 0.97
SPOP-220ENST00000515508 MARK3P27448 753 aa21.1■□□□□ 0.97
SPOP-220ENST00000515508 TMTC3Q6ZXV5 915 aa21.1■□□□□ 0.97
SPOP-220ENST00000515508 FIBCD1Q8N539 461 aa21.1■□□□□ 0.97
SPOP-220ENST00000515508 SMARCAD1Q9H4L7 1026 aa21.1■□□□□ 0.97
SPOP-220ENST00000515508 JADE2Q9NQC1 790 aa21.1■□□□□ 0.97
SPOP-220ENST00000515508 RWDD3Q9Y3V2 267 aa21.1■□□□□ 0.97
SPOP-220ENST00000515508 SPDYE3A6NKU9 549 aa21.09■□□□□ 0.97
SPOP-220ENST00000515508 H3BQ06 376 aaPredicted RBP21.09■□□□□ 0.97
SPOP-220ENST00000515508 SLC27A2O14975 620 aa21.09■□□□□ 0.97
SPOP-220ENST00000515508 RPLP2P05387 115 aaKnown RBP21.09■□□□□ 0.97
SPOP-220ENST00000515508 RB1P06400 928 aa21.09■□□□□ 0.97
SPOP-220ENST00000515508 CTNNB1P35222 781 aa21.09■□□□□ 0.97
SPOP-220ENST00000515508 FBXO47Q5MNV8 452 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms