RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 RETREG2Q8NC44 543 aa14.54□□□□□ -0.08
CLCN3-210ENST00000515420 RNPC3Q96LT9 517 aaKnown RBP14.54□□□□□ -0.08
CLCN3-210ENST00000515420 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.54□□□□□ -0.08
CLCN3-210ENST00000515420 MTIF3Q9H2K0 278 aaKnown RBP14.54□□□□□ -0.08
CLCN3-210ENST00000515420 AGO4Q9HCK5 861 aaKnown RBP14.54□□□□□ -0.08
CLCN3-210ENST00000515420 SCN5AQ14524 2016 aa14.53□□□□□ -0.08
CLCN3-210ENST00000515420 GSTTP1A0A1W2PQM5 241 aa14.53□□□□□ -0.08
CLCN3-210ENST00000515420 C17orf102A2RUQ5 167 aa14.53□□□□□ -0.08
CLCN3-210ENST00000515420 ADAMTS3O15072 1205 aa14.53□□□□□ -0.08
CLCN3-210ENST00000515420 LGR5O75473 907 aa14.53□□□□□ -0.08
CLCN3-210ENST00000515420 CTDNEP1O95476 244 aa14.53□□□□□ -0.08
CLCN3-210ENST00000515420 SMIM10L2AP0DMW4 78 aa14.53□□□□□ -0.08
CLCN3-210ENST00000515420 SMIM10L2BP0DMW5 78 aa14.53□□□□□ -0.08
CLCN3-210ENST00000515420 GNAT1P11488 350 aa14.53□□□□□ -0.08
CLCN3-210ENST00000515420 CCL23P55773 120 aa14.53□□□□□ -0.08
CLCN3-210ENST00000515420 SMAD3P84022 425 aaKnown RBP14.53□□□□□ -0.08
CLCN3-210ENST00000515420 SP4Q02446 784 aa14.53□□□□□ -0.08
CLCN3-210ENST00000515420 NPY5RQ15761 445 aa14.53□□□□□ -0.08
CLCN3-210ENST00000515420 RASIP1Q5U651 963 aa14.53□□□□□ -0.08
CLCN3-210ENST00000515420 MOXD1Q6UVY6 613 aa14.53□□□□□ -0.08
CLCN3-210ENST00000515420 C16orf59Q7L2K0 433 aa14.53□□□□□ -0.08
CLCN3-210ENST00000515420 SERINC5Q86VE9 423 aa14.53□□□□□ -0.08
CLCN3-210ENST00000515420 RASGRP4Q8TDF6 673 aa14.53□□□□□ -0.08
CLCN3-210ENST00000515420 KIF2CQ99661 725 aa14.53□□□□□ -0.08
CLCN3-210ENST00000515420 PHF20Q9BVI0 1012 aa14.53□□□□□ -0.08
CLCN3-210ENST00000515420 SMARCAD1Q9H4L7 1026 aa14.53□□□□□ -0.08
CLCN3-210ENST00000515420 UPF2Q9HAU5 1272 aaKnown RBP14.53□□□□□ -0.08
CLCN3-210ENST00000515420 TBC1D22BQ9NU19 505 aa14.53□□□□□ -0.08
CLCN3-210ENST00000515420 ERAP1Q9NZ08 941 aa14.53□□□□□ -0.08
CLCN3-210ENST00000515420 ORC3Q9UBD5 711 aaPredicted RBP14.53□□□□□ -0.08
CLCN3-210ENST00000515420 LIMCH1Q9UPQ0 1083 aa14.53□□□□□ -0.08
CLCN3-210ENST00000515420 SZT2Q5T011 3432 aa14.52□□□□□ -0.08
CLCN3-210ENST00000515420 NRCAMQ92823 1304 aa14.52□□□□□ -0.08
CLCN3-210ENST00000515420 IPO5O00410 1097 aaKnown RBP14.52□□□□□ -0.09
CLCN3-210ENST00000515420 CAND2O75155 1236 aa14.52□□□□□ -0.09
CLCN3-210ENST00000515420 ATG7O95352 703 aa14.52□□□□□ -0.09
CLCN3-210ENST00000515420 LARGE1O95461 756 aa14.52□□□□□ -0.09
CLCN3-210ENST00000515420 FGBP02675 491 aa14.52□□□□□ -0.09
CLCN3-210ENST00000515420 IQCF3P0C7M6 154 aa14.52□□□□□ -0.09
CLCN3-210ENST00000515420 SELPP16109 830 aa14.52□□□□□ -0.09
CLCN3-210ENST00000515420 ITGB3BPQ13352 177 aaPredicted RBP14.52□□□□□ -0.09
CLCN3-210ENST00000515420 UTP14CQ5TAP6 766 aaKnown RBP14.52□□□□□ -0.09
CLCN3-210ENST00000515420 FAM109BQ6ICB4 259 aaPredicted RBP14.52□□□□□ -0.09
CLCN3-210ENST00000515420 KRT25Q7Z3Z0 450 aa14.52□□□□□ -0.09
CLCN3-210ENST00000515420 TRIM50Q86XT4 487 aa14.52□□□□□ -0.09
CLCN3-210ENST00000515420 PPP1R13LQ8WUF5 828 aa14.52□□□□□ -0.09
CLCN3-210ENST00000515420 HERVK_113Q902F9 699 aa14.52□□□□□ -0.09
CLCN3-210ENST00000515420 DHX38Q92620 1227 aaKnown RBP14.52□□□□□ -0.09
CLCN3-210ENST00000515420 TNPO1Q92973 898 aaKnown RBP14.52□□□□□ -0.09
CLCN3-210ENST00000515420 LRCH3Q96II8 777 aa14.52□□□□□ -0.09
CLCN3-210ENST00000515420 AIFM3Q96NN9 605 aa14.52□□□□□ -0.09
CLCN3-210ENST00000515420 AZI2Q9H6S1 392 aa14.52□□□□□ -0.09
CLCN3-210ENST00000515420 PKD2L1Q9P0L9 805 aa14.52□□□□□ -0.09
CLCN3-210ENST00000515420 DHX15O43143 795 aaKnown RBP14.51□□□□□ -0.09
CLCN3-210ENST00000515420 SLC26A2P50443 739 aa14.51□□□□□ -0.09
CLCN3-210ENST00000515420 ACTR2P61160 394 aa14.51□□□□□ -0.09
CLCN3-210ENST00000515420 ADAM17P78536 824 aa14.51□□□□□ -0.09
CLCN3-210ENST00000515420 NONOQ15233 471 aaKnown RBP eCLIP14.51□□□□□ -0.09
CLCN3-210ENST00000515420 TRIM71Q2Q1W2 868 aaKnown RBP14.51□□□□□ -0.09
CLCN3-210ENST00000515420 ZNF365Q70YC5 407 aa14.51□□□□□ -0.09
CLCN3-210ENST00000515420 PLPPR4Q7Z2D5 763 aa14.51□□□□□ -0.09
CLCN3-210ENST00000515420 NSUN7Q8NE18 718 aaKnown RBP14.51□□□□□ -0.09
CLCN3-210ENST00000515420 TBCKQ8TEA7 893 aa14.51□□□□□ -0.09
CLCN3-210ENST00000515420 GLG1Q92896 1179 aa14.51□□□□□ -0.09
CLCN3-210ENST00000515420 ATP6V0A1Q93050 837 aa14.51□□□□□ -0.09
CLCN3-210ENST00000515420 LENG9Q96B70 501 aa14.51□□□□□ -0.09
CLCN3-210ENST00000515420 SCLYQ96I15 445 aa14.51□□□□□ -0.09
CLCN3-210ENST00000515420 ZSCAN31Q96LW9 406 aaPredicted RBP14.51□□□□□ -0.09
CLCN3-210ENST00000515420 ZNF577Q9BSK1 485 aa14.51□□□□□ -0.09
CLCN3-210ENST00000515420 RNPEPQ9H4A4 650 aa14.51□□□□□ -0.09
CLCN3-210ENST00000515420 SH2B1Q9NRF2 756 aaPredicted RBP14.51□□□□□ -0.09
CLCN3-210ENST00000515420 TELO2Q9Y4R8 837 aa14.51□□□□□ -0.09
CLCN3-210ENST00000515420 MYH9P35579 1960 aaKnown RBP14.51□□□□□ -0.09
CLCN3-210ENST00000515420 WDR81Q562E7 1941 aa14.51□□□□□ -0.09
CLCN3-210ENST00000515420 TMEM265A0A087WTH1 108 aa14.5□□□□□ -0.09
CLCN3-210ENST00000515420 CYP3A7-CYP3A51PA0A087WV96 503 aa14.5□□□□□ -0.09
CLCN3-210ENST00000515420 IGKV6D-21A0A0A0MT36 114 aa14.5□□□□□ -0.09
CLCN3-210ENST00000515420 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.5□□□□□ -0.09
CLCN3-210ENST00000515420 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.5□□□□□ -0.09
CLCN3-210ENST00000515420 ACRP10323 421 aa14.5□□□□□ -0.09
CLCN3-210ENST00000515420 CKBP12277 381 aa14.5□□□□□ -0.09
CLCN3-210ENST00000515420 FDPSP14324 419 aaKnown RBP14.5□□□□□ -0.09
CLCN3-210ENST00000515420 CYP3A7P24462 503 aa14.5□□□□□ -0.09
CLCN3-210ENST00000515420 KRT76Q01546 638 aa14.5□□□□□ -0.09
CLCN3-210ENST00000515420 HIC1Q14526 733 aa14.5□□□□□ -0.09
CLCN3-210ENST00000515420 RABEP1Q15276 862 aa14.5□□□□□ -0.09
CLCN3-210ENST00000515420 Q4G0T1 1027 aa14.5□□□□□ -0.09
CLCN3-210ENST00000515420 PRR16Q569H4 304 aa14.5□□□□□ -0.09
CLCN3-210ENST00000515420 ZNF746Q6NUN9 644 aaPredicted RBP14.5□□□□□ -0.09
CLCN3-210ENST00000515420 LRRC8DQ7L1W4 858 aa14.5□□□□□ -0.09
CLCN3-210ENST00000515420 SMAP1Q8IYB5 467 aaPredicted RBP14.5□□□□□ -0.09
CLCN3-210ENST00000515420 NECAB1Q8N987 351 aa14.5□□□□□ -0.09
CLCN3-210ENST00000515420 VWCEQ96DN2 955 aa14.5□□□□□ -0.09
CLCN3-210ENST00000515420 PCYT2Q99447 389 aa14.5□□□□□ -0.09
CLCN3-210ENST00000515420 RIT2Q99578 217 aa14.5□□□□□ -0.09
CLCN3-210ENST00000515420 LLPHQ9BRT6 129 aaKnown RBP14.5□□□□□ -0.09
CLCN3-210ENST00000515420 BRMS1Q9HCU9 246 aa14.5□□□□□ -0.09
CLCN3-210ENST00000515420 TCEAL9Q9UHQ7 104 aa14.5□□□□□ -0.09
CLCN3-210ENST00000515420 TET1Q8NFU7 2136 aa14.5□□□□□ -0.09
CLCN3-210ENST00000515420 EDIL3O43854 480 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms