RNA–Protein interactions for RNA: ENST00000514508.1

COPB2-212, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-212ENST00000514508 PRO3102Q9H379 93 aa14.07□□□□□ -0.16
COPB2-212ENST00000514508 TRMT13Q9NUP7 481 aaKnown RBP14.07□□□□□ -0.16
COPB2-212ENST00000514508 HDAC6Q9UBN7 1215 aa14.07□□□□□ -0.16
COPB2-212ENST00000514508 GTF2IRD1Q9UHL9 959 aa14.07□□□□□ -0.16
COPB2-212ENST00000514508 COLQQ9Y215 455 aaPredicted RBP14.07□□□□□ -0.16
COPB2-212ENST00000514508 KIF3AQ9Y496 699 aa14.07□□□□□ -0.16
COPB2-212ENST00000514508 TELO2Q9Y4R8 837 aa14.07□□□□□ -0.16
COPB2-212ENST00000514508 MYH9P35579 1960 aaKnown RBP14.06□□□□□ -0.16
COPB2-212ENST00000514508 A0A1W2PPC1 479 aa14.06□□□□□ -0.16
COPB2-212ENST00000514508 DHX15O43143 795 aaKnown RBP14.06□□□□□ -0.16
COPB2-212ENST00000514508 FOSBP53539 338 aa14.06□□□□□ -0.16
COPB2-212ENST00000514508 ACTR2P61160 394 aa14.06□□□□□ -0.16
COPB2-212ENST00000514508 NR5A1Q13285 461 aa14.06□□□□□ -0.16
COPB2-212ENST00000514508 PTGISQ16647 500 aa14.06□□□□□ -0.16
COPB2-212ENST00000514508 NEK8Q86SG6 692 aa14.06□□□□□ -0.16
COPB2-212ENST00000514508 DIS3L2Q8IYB7 885 aaKnown RBP14.06□□□□□ -0.16
COPB2-212ENST00000514508 PPP1R13LQ8WUF5 828 aa14.06□□□□□ -0.16
COPB2-212ENST00000514508 BADQ92934 168 aa14.06□□□□□ -0.16
COPB2-212ENST00000514508 MBOAT7Q96N66 472 aa14.06□□□□□ -0.16
COPB2-212ENST00000514508 SMARCAD1Q9H4L7 1026 aa14.06□□□□□ -0.16
COPB2-212ENST00000514508 TCEAL9Q9UHQ7 104 aa14.06□□□□□ -0.16
COPB2-212ENST00000514508 NOD1Q9Y239 953 aa14.06□□□□□ -0.16
COPB2-212ENST00000514508 EMSYQ7Z589 1322 aa14.06□□□□□ -0.16
COPB2-212ENST00000514508 WDR81Q562E7 1941 aa14.05□□□□□ -0.16
COPB2-212ENST00000514508 BTBD18B2RXH4 712 aa14.05□□□□□ -0.16
COPB2-212ENST00000514508 DDX39AO00148 427 aaKnown RBP14.05□□□□□ -0.16
COPB2-212ENST00000514508 MSH4O15457 936 aa14.05□□□□□ -0.16
COPB2-212ENST00000514508 LGR5O75473 907 aa14.05□□□□□ -0.16
COPB2-212ENST00000514508 ATG7O95352 703 aa14.05□□□□□ -0.16
COPB2-212ENST00000514508 TDP2O95551 362 aa14.05□□□□□ -0.16
COPB2-212ENST00000514508 GCFC2P16383 781 aaKnown RBP14.05□□□□□ -0.16
COPB2-212ENST00000514508 ITGB8P26012 769 aa14.05□□□□□ -0.16
COPB2-212ENST00000514508 KRT76Q01546 638 aa14.05□□□□□ -0.16
COPB2-212ENST00000514508 LETM2Q2VYF4 491 aa14.05□□□□□ -0.16
COPB2-212ENST00000514508 PPP4R3AQ6IN85 833 aa14.05□□□□□ -0.16
COPB2-212ENST00000514508 GDF6Q6KF10 455 aaPredicted RBP14.05□□□□□ -0.16
COPB2-212ENST00000514508 MFSD5Q6N075 450 aa14.05□□□□□ -0.16
COPB2-212ENST00000514508 TRIM50Q86XT4 487 aa14.05□□□□□ -0.16
COPB2-212ENST00000514508 FBXO18Q8NFZ0 1043 aa14.05□□□□□ -0.16
COPB2-212ENST00000514508 GLG1Q92896 1179 aa14.05□□□□□ -0.16
COPB2-212ENST00000514508 TNFRSF25Q93038 417 aa14.05□□□□□ -0.16
COPB2-212ENST00000514508 RIT2Q99578 217 aa14.05□□□□□ -0.16
COPB2-212ENST00000514508 NOC4LQ9BVI4 516 aaKnown RBP14.05□□□□□ -0.16
COPB2-212ENST00000514508 PPP1R12CQ9BZL4 782 aa14.05□□□□□ -0.16
COPB2-212ENST00000514508 UBE2OQ9C0C9 1292 aaKnown RBP14.05□□□□□ -0.16
COPB2-212ENST00000514508 HIPK3Q9H422 1215 aa14.05□□□□□ -0.16
COPB2-212ENST00000514508 AZI2Q9H6S1 392 aa14.05□□□□□ -0.16
COPB2-212ENST00000514508 ERAP1Q9NZ08 941 aa14.05□□□□□ -0.16
COPB2-212ENST00000514508 CCNE2O96020 404 aa14.04□□□□□ -0.16
COPB2-212ENST00000514508 CYP2C9P11712 490 aa14.04□□□□□ -0.16
COPB2-212ENST00000514508 GUCY1B3Q02153 619 aa14.04□□□□□ -0.16
COPB2-212ENST00000514508 FPGSQ05932 587 aa14.04□□□□□ -0.16
COPB2-212ENST00000514508 EARS2Q5JPH6 523 aaKnown RBP14.04□□□□□ -0.16
COPB2-212ENST00000514508 ZNF746Q6NUN9 644 aaPredicted RBP14.04□□□□□ -0.16
COPB2-212ENST00000514508 MIS18BP1Q6P0N0 1132 aa14.04□□□□□ -0.16
COPB2-212ENST00000514508 PLPPR4Q7Z2D5 763 aa14.04□□□□□ -0.16
COPB2-212ENST00000514508 SMAP1Q8IYB5 467 aaPredicted RBP14.04□□□□□ -0.16
COPB2-212ENST00000514508 TMEM199Q8N511 208 aa14.04□□□□□ -0.16
COPB2-212ENST00000514508 SLC5A5Q92911 643 aa14.04□□□□□ -0.16
COPB2-212ENST00000514508 TNPO1Q92973 898 aaKnown RBP14.04□□□□□ -0.16
COPB2-212ENST00000514508 PCDH10Q9P2E7 1040 aa14.04□□□□□ -0.16
COPB2-212ENST00000514508 DDX25Q9UHL0 483 aaKnown RBP14.04□□□□□ -0.16
COPB2-212ENST00000514508 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.04□□□□□ -0.16
COPB2-212ENST00000514508 IGKV6D-21A0A0A0MT36 114 aa14.03□□□□□ -0.16
COPB2-212ENST00000514508 C17orf102A2RUQ5 167 aa14.03□□□□□ -0.16
COPB2-212ENST00000514508 CCNT1O60563 726 aaKnown RBP14.03□□□□□ -0.16
COPB2-212ENST00000514508 GAS7O60861 476 aa14.03□□□□□ -0.16
COPB2-212ENST00000514508 SMIM10L2AP0DMW4 78 aa14.03□□□□□ -0.16
COPB2-212ENST00000514508 SMIM10L2BP0DMW5 78 aa14.03□□□□□ -0.16
COPB2-212ENST00000514508 GNAT1P11488 350 aa14.03□□□□□ -0.16
COPB2-212ENST00000514508 HOXC8P31273 242 aa14.03□□□□□ -0.16
COPB2-212ENST00000514508 CYP2C18P33260 490 aa14.03□□□□□ -0.16
COPB2-212ENST00000514508 SLC26A2P50443 739 aa14.03□□□□□ -0.16
COPB2-212ENST00000514508 STAT5BP51692 787 aa14.03□□□□□ -0.16
COPB2-212ENST00000514508 BFSP2Q13515 415 aa14.03□□□□□ -0.16
COPB2-212ENST00000514508 LRCH2Q5VUJ6 765 aa14.03□□□□□ -0.16
COPB2-212ENST00000514508 FAM160B1Q5W0V3 765 aa14.03□□□□□ -0.16
COPB2-212ENST00000514508 ABHD15Q6UXT9 468 aa14.03□□□□□ -0.16
COPB2-212ENST00000514508 CCDC155Q8N6L0 562 aa14.03□□□□□ -0.16
COPB2-212ENST00000514508 CAGE1Q8TC20 777 aa14.03□□□□□ -0.16
COPB2-212ENST00000514508 UIMC1Q96RL1 719 aa14.03□□□□□ -0.16
COPB2-212ENST00000514508 PCYT2Q99447 389 aa14.03□□□□□ -0.16
COPB2-212ENST00000514508 TEKT3Q9BXF9 490 aa14.03□□□□□ -0.16
COPB2-212ENST00000514508 FOXP1Q9H334 677 aaPredicted RBP14.03□□□□□ -0.16
COPB2-212ENST00000514508 RNPEPQ9H4A4 650 aa14.03□□□□□ -0.16
COPB2-212ENST00000514508 NRCAMQ92823 1304 aa14.02□□□□□ -0.17
COPB2-212ENST00000514508 FAM205CA6NFA0 338 aa14.02□□□□□ -0.17
COPB2-212ENST00000514508 WDR64B1ANS9 1081 aa14.02□□□□□ -0.17
COPB2-212ENST00000514508 PITPNM1O00562 1244 aa14.02□□□□□ -0.17
COPB2-212ENST00000514508 PTK7Q13308 1070 aa14.02□□□□□ -0.17
COPB2-212ENST00000514508 PPIGQ13427 754 aaKnown RBP eCLIP14.02□□□□□ -0.172e-6■■■■□ 23.4
COPB2-212ENST00000514508 TDHQ8IZJ6 230 aa14.02□□□□□ -0.17
COPB2-212ENST00000514508 RETREG2Q8NC44 543 aa14.02□□□□□ -0.17
COPB2-212ENST00000514508 ETNPPLQ8TBG4 499 aa14.02□□□□□ -0.17
COPB2-212ENST00000514508 AFAP1L1Q8TED9 768 aa14.02□□□□□ -0.17
COPB2-212ENST00000514508 FAM20AQ96MK3 541 aa14.02□□□□□ -0.17
COPB2-212ENST00000514508 CTAGE1Q96RT6 745 aa14.02□□□□□ -0.17
COPB2-212ENST00000514508 ZNF302Q9NR11 478 aa14.02□□□□□ -0.17
COPB2-212ENST00000514508 SMC3Q9UQE7 1217 aa14.02□□□□□ -0.17
COPB2-212ENST00000514508 PCDHA10Q9Y5I2 948 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms