RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 EIF2AK1Q9BQI3 630 aaKnown RBP9.07□□□□□ -0.96
CPNE4-211ENST00000514439 POLR3CQ9BUI4 534 aaPredicted RBP9.07□□□□□ -0.96
CPNE4-211ENST00000514439 TUBB2BQ9BVA1 445 aa9.07□□□□□ -0.96
CPNE4-211ENST00000514439 TANGO6Q9C0B7 1094 aa9.07□□□□□ -0.96
CPNE4-211ENST00000514439 SH2D4AQ9H788 454 aa9.07□□□□□ -0.96
CPNE4-211ENST00000514439 ZSWIM4Q9H7M6 989 aa9.07□□□□□ -0.96
CPNE4-211ENST00000514439 EMILIN3Q9NT22 766 aa9.07□□□□□ -0.96
CPNE4-211ENST00000514439 FBXO28Q9NVF7 368 aa9.07□□□□□ -0.96
CPNE4-211ENST00000514439 ARGLU1Q9NWB6 273 aaPredicted RBP9.07□□□□□ -0.96
CPNE4-211ENST00000514439 MRPL11Q9Y3B7 192 aaKnown RBP9.07□□□□□ -0.96
CPNE4-211ENST00000514439 SMCHD1A6NHR9 2005 aa9.07□□□□□ -0.96
CPNE4-211ENST00000514439 RCCD1A6NED2 376 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 WNT10BO00744 389 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 PLA2G6O60733 806 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 IPO7O95373 1038 aaKnown RBP9.06□□□□□ -0.96
CPNE4-211ENST00000514439 PLEKP08567 350 aaPredicted RBP9.06□□□□□ -0.96
CPNE4-211ENST00000514439 UBXN2AP68543 259 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 SLC30A10Q6XR72 485 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 ZNF662Q6ZS27 426 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 SFR1Q86XK3 245 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 ZC3H3Q8IXZ2 948 aaKnown RBP9.06□□□□□ -0.96
CPNE4-211ENST00000514439 CEP112Q8N8E3 955 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 RABGGTAQ92696 567 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 JAKMIP2Q96AA8 810 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 LACRTQ9GZZ8 138 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 BHMT2Q9H2M3 363 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 RGL1Q9NZL6 768 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 PUF60Q9UHX1 559 aaKnown RBP9.06□□□□□ -0.96
CPNE4-211ENST00000514439 KIF13BQ9NQT8 1826 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 SHTN1A0MZ66 631 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 LRRC53A6NM62 1247 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 ZNF263O14978 683 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 KRT86O43790 486 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 PSMD10O75832 226 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 GNA14O95837 355 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 ZSCAN20P17040 1043 aaPredicted RBP9.06□□□□□ -0.96
CPNE4-211ENST00000514439 MARSP56192 900 aaKnown RBP9.06□□□□□ -0.96
CPNE4-211ENST00000514439 AMPD2Q01433 879 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 CYP27A1Q02318 531 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 KCNMA1Q12791 1236 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 EDRF1Q3B7T1 1238 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 LRCH2Q5VUJ6 765 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 RRAGAQ7L523 313 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 TRIM59Q8IWR1 403 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 NEK11Q8NG66 645 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 BAP1Q92560 729 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 CCDC42Q96M95 316 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 RUSC1Q9BVN2 902 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 ARHGAP20Q9P2F6 1191 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 FEM1BQ9UK73 627 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 SCAF8Q9UPN6 1271 aaKnown RBP9.06□□□□□ -0.96
CPNE4-211ENST00000514439 RABGAP1Q9Y3P9 1069 aa9.06□□□□□ -0.96
CPNE4-211ENST00000514439 RSPH10B2B2RC85 870 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 CHMP2AO43633 222 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 EYA4O95677 639 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 ASNSP08243 561 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 RSPH10BP0C881 870 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 MAP3K10Q02779 954 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 SF3B2Q13435 895 aaKnown RBP9.05□□□□□ -0.96
CPNE4-211ENST00000514439 WHAMMP3Q1A5X7 153 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 CIAPIN1Q6FI81 312 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 PDXDC1Q6P996 788 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 OTOP1Q7RTM1 612 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 LDHDQ86WU2 507 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 GPIHBP1Q8IV16 184 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 SLC16A10Q8TF71 515 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 SLC5A5Q92911 643 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 HSD17B14Q9BPX1 270 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 MYOZ2Q9NPC6 264 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 MYBP10242 640 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 NR2F2P24468 414 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 HOXD13P35453 343 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 VAV2P52735 878 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 PPP2R5CQ13362 524 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 ADAM9Q13443 819 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 CTTNQ14247 550 aaKnown RBP9.05□□□□□ -0.96
CPNE4-211ENST00000514439 KNOP1Q1ED39 458 aaKnown RBP9.05□□□□□ -0.96
CPNE4-211ENST00000514439 CEP55Q53EZ4 464 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 TMCO3Q6UWJ1 677 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 EPM2AIP1Q7L775 607 aaPredicted RBP9.05□□□□□ -0.96
CPNE4-211ENST00000514439 KRT26Q7Z3Y9 468 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 EHBP1Q8NDI1 1231 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 PIGOQ8TEQ8 1089 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 DYDC2Q96IM9 177 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 ZFP91Q96JP5 570 aaPredicted RBP9.05□□□□□ -0.96
CPNE4-211ENST00000514439 PARD6BQ9BYG5 372 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 ZNF341Q9BYN7 854 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 EHMT1Q9H9B1 1298 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 TUFT1Q9NNX1 390 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 FAM53CQ9NYF3 392 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 PIM2Q9P1W9 311 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 MYO6Q9UM54 1294 aa9.05□□□□□ -0.96
CPNE4-211ENST00000514439 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.05□□□□□ -0.96
CPNE4-211ENST00000514439 ENC1O14682 589 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 CETN3O15182 167 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 GAS7O60861 476 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 TBCAO75347 108 aaKnown RBP9.04□□□□□ -0.96
CPNE4-211ENST00000514439 NOL4O94818 638 aa9.04□□□□□ -0.96
CPNE4-211ENST00000514439 PRPF6O94906 941 aaKnown RBP9.04□□□□□ -0.96
CPNE4-211ENST00000514439 SLITRK3O94933 977 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms