RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	SUMO1	P63165	101 aa	Known RBP	4.72	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	PRSS53	Q2L4Q9	553 aa		4.72	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	UBXN11	Q5T124	520 aa		4.72	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	NT5DC1	Q5TFE4	455 aa		4.72	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	USP53	Q70EK8	1073 aa		4.72	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	THNSL2	Q86YJ6	484 aa		4.72	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	FEZF2	Q8TBJ5	459 aa		4.72	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	4.72	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	STAG1	Q8WVM7	1258 aa		4.72	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	EXOC2	Q96KP1	924 aa		4.72	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	PHF20	Q9BVI0	1012 aa		4.72	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	RXFP1	Q9HBX9	757 aa		4.72	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	KLHL42	Q9P2K6	505 aa		4.72	□□□□□ -1.65
CALCOCO2-223	ENST00000514267	TMEFF2	Q9UIK5	374 aa	Predicted RBP	4.72	□□□□□ -1.65
CALCOCO2-223	ENST00000514267		A0A087X0B3	334 aa		4.71	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	PRODH	O43272	600 aa		4.71	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	DLX3	O60479	287 aa		4.71	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	S100B	P04271	92 aa	Predicted RBP	4.71	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	PDGFRB	P09619	1106 aa		4.71	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	MYCLP1	P12525	358 aa	Predicted RBP	4.71	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	DLX2	Q07687	328 aa	Predicted RBP	4.71	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	SPATS1	Q496A3	300 aa		4.71	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	TRIM61	Q5EBN2	209 aa		4.71	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	FOXB2	Q5VYV0	432 aa		4.71	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	LBX2	Q6XYB7	198 aa		4.71	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	NOL8	Q76FK4	1167 aa	Known RBP	4.71	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	DHX37	Q8IY37	1157 aa	Known RBP	4.71	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	LGI4	Q8N135	537 aa		4.71	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	ADAMTS17	Q8TE56	1095 aa		4.71	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	GORASP1	Q9BQQ3	440 aa		4.71	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	KRTAP4-7	Q9BYR0	210 aa		4.71	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	MAGEC2	Q9UBF1	373 aa	Predicted RBP	4.71	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	MCM8	Q9UJA3	840 aa		4.71	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	ATP8A1	Q9Y2Q0	1164 aa		4.71	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	SIT1	Q9Y3P8	196 aa		4.71	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	TCRBV5S2	A0A599	114 aa		4.7	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	ALG1L2	C9J202	215 aa		4.7	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	NOBOX	O60393	691 aa		4.7	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	PDE8A	O60658	829 aa		4.7	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	GNAT1	P11488	350 aa		4.7	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	CNGA1	P29973	690 aa		4.7	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	ITGA1	P56199	1179 aa		4.7	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	VMAC	Q2NL98	169 aa		4.7	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	FAM209A	Q5JX71	171 aa		4.7	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	OTOP3	Q7RTS5	596 aa		4.7	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	ZNF761	Q86XN6	746 aa	Predicted RBP	4.7	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	NLGN4X	Q8N0W4	816 aa		4.7	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	UHMK1	Q8TAS1	419 aa	Known RBP	4.7	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	ZNF526	Q8TF50	670 aa	Predicted RBP	4.7	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	LCOR	Q96JN0	433 aa	Predicted RBP	4.7	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	C20orf173	Q96LM9	149 aa		4.7	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	CEP89	Q96ST8	783 aa		4.7	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	SPATA25	Q9BR10	227 aa		4.7	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	LGR4	Q9BXB1	951 aa		4.7	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	PCGF6	Q9BYE7	350 aa		4.7	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	BCAS3	Q9H6U6	928 aa		4.7	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	HOMER2	Q9NSB8	354 aa		4.7	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	ASH2L	Q9UBL3	628 aa		4.7	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	GSG1L2	A8MUP6	293 aa		4.69	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	EFCAB14	O75071	495 aa		4.69	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	NPTXR	O95502	500 aa		4.69	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	CPE	P16870	476 aa		4.69	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	GJA4	P35212	333 aa		4.69	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	EXOSC10	Q01780	885 aa	Known RBP	4.69	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	PLP2	Q04941	152 aa		4.69	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	PAK1	Q13153	545 aa		4.69	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	SF1	Q15637	639 aa	Known RBP	4.69	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	CT47A1	Q5JQC4	288 aa	Predicted RBP	4.69	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	LCE4A	Q5TA78	99 aa		4.69	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	PRAMEF18	Q5VWM3	479 aa		4.69	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	VASN	Q6EMK4	673 aa		4.69	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	DENND5A	Q6IQ26	1287 aa		4.69	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	TEPP	Q6URK8	271 aa		4.69	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	DBX2	Q6ZNG2	339 aa		4.69	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	FERMT3	Q86UX7	667 aa		4.69	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	AHI1	Q8N157	1196 aa		4.69	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	PPM1K	Q8N3J5	372 aa		4.69	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	PRPF38A	Q8NAV1	312 aa	Known RBP	4.69	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	PTPRN2	Q92932	1015 aa		4.69	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	OSBP2	Q969R2	916 aa		4.69	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	L2HGDH	Q9H9P8	463 aa		4.69	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	DLL4	Q9NR61	685 aa		4.69	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	MROH6	A6NGR9	719 aa		4.68	□□□□□ -1.66
CALCOCO2-223	ENST00000514267		K7ESM1	405 aa		4.68	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	WNT9A	O14904	365 aa		4.68	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	RAPGEF3	O95398	923 aa		4.68	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	PARN	O95453	639 aa	Known RBP	4.68	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	LCP1	P13796	627 aa		4.68	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	POU3F3	P20264	500 aa	Predicted RBP	4.68	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	POU3F2	P20265	443 aa	Predicted RBP	4.68	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	GRIA2	P42262	883 aa		4.68	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	GABRE	P78334	506 aa		4.68	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	NFKB2	Q00653	900 aa		4.68	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	SMAD4	Q13485	552 aa	Known RBP	4.68	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	ZNF827	Q17R98	1081 aa		4.68	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	C21orf62-AS1	Q17RA5	79 aa		4.68	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	CR1L	Q2VPA4	569 aa		4.68	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	HSP90AB2P	Q58FF8	381 aa		4.68	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	FAM47C	Q5HY64	1035 aa		4.68	□□□□□ -1.66
CALCOCO2-223	ENST00000514267	YOD1	Q5VVQ6	348 aa	Predicted RBP	4.68	□□□□□ -1.66

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