RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 CAPN15O75808 1086 aa12.79□□□□□ -0.36
HTT-213ENST00000513806 ASGR1P07306 291 aa12.79□□□□□ -0.36
HTT-213ENST00000513806 MARCKSP29966 332 aaPredicted RBP12.79□□□□□ -0.36
HTT-213ENST00000513806 TCF7P36402 384 aaPredicted RBP12.79□□□□□ -0.36
HTT-213ENST00000513806 PTPAQ15257 358 aa12.79□□□□□ -0.36
HTT-213ENST00000513806 TPRNQ4KMQ1 711 aa12.79□□□□□ -0.36
HTT-213ENST00000513806 TRMT1LQ7Z2T5 733 aaKnown RBP12.79□□□□□ -0.36
HTT-213ENST00000513806 PPTC7Q8NI37 304 aa12.79□□□□□ -0.36
HTT-213ENST00000513806 EMID1Q96A84 441 aaPredicted RBP12.79□□□□□ -0.36
HTT-213ENST00000513806 PCYT2Q99447 389 aa12.79□□□□□ -0.36
HTT-213ENST00000513806 TTC12Q9H892 705 aaPredicted RBP12.79□□□□□ -0.36
HTT-213ENST00000513806 Q9Y3F1 56 aa12.79□□□□□ -0.36
HTT-213ENST00000513806 MKI67P46013 3256 aaKnown RBP12.79□□□□□ -0.36
HTT-213ENST00000513806 A0A087WWV3 80 aa12.78□□□□□ -0.36
HTT-213ENST00000513806 A6NJR5 290 aa12.78□□□□□ -0.36
HTT-213ENST00000513806 BAG4O95429 457 aaKnown RBP12.78□□□□□ -0.36
HTT-213ENST00000513806 LGALS2P05162 132 aa12.78□□□□□ -0.36
HTT-213ENST00000513806 MARK3P27448 753 aa12.78□□□□□ -0.36
HTT-213ENST00000513806 CDC25AP30304 524 aa12.78□□□□□ -0.36
HTT-213ENST00000513806 ACLYP53396 1101 aa12.78□□□□□ -0.36
HTT-213ENST00000513806 SPIRE1Q08AE8 756 aa12.78□□□□□ -0.36
HTT-213ENST00000513806 UGCGQ16739 394 aa12.78□□□□□ -0.36
HTT-213ENST00000513806 SPECC1Q5M775 1068 aa12.78□□□□□ -0.36
HTT-213ENST00000513806 B3GNT9Q6UX72 402 aa12.78□□□□□ -0.36
HTT-213ENST00000513806 RNF180Q86T96 592 aa12.78□□□□□ -0.36
HTT-213ENST00000513806 CCDC60Q8IWA6 550 aaPredicted RBP12.78□□□□□ -0.36
HTT-213ENST00000513806 KAT2BQ92831 832 aa12.78□□□□□ -0.36
HTT-213ENST00000513806 PAWRQ96IZ0 340 aaKnown RBP12.78□□□□□ -0.36
HTT-213ENST00000513806 CLIC6Q96NY7 704 aa12.78□□□□□ -0.36
HTT-213ENST00000513806 RIT2Q99578 217 aa12.78□□□□□ -0.36
HTT-213ENST00000513806 SPC25Q9HBM1 224 aa12.78□□□□□ -0.36
HTT-213ENST00000513806 GDPD2Q9HCC8 539 aa12.78□□□□□ -0.36
HTT-213ENST00000513806 TBC1D22BQ9NU19 505 aa12.78□□□□□ -0.36
HTT-213ENST00000513806 SAMM50Q9Y512 469 aa12.78□□□□□ -0.36
HTT-213ENST00000513806 ELP1O95163 1332 aa12.78□□□□□ -0.36
HTT-213ENST00000513806 A0A1W2PQ45 241 aaPredicted RBP12.77□□□□□ -0.37
HTT-213ENST00000513806 A0A1W2PQY0 241 aa12.77□□□□□ -0.37
HTT-213ENST00000513806 VWA3AA6NCI4 1184 aa12.77□□□□□ -0.37
HTT-213ENST00000513806 KBTBD13C9JR72 458 aa12.77□□□□□ -0.37
HTT-213ENST00000513806 SUPT20HL2P0C7V6 817 aa12.77□□□□□ -0.37
HTT-213ENST00000513806 NCLP19338 710 aaKnown RBP12.77□□□□□ -0.37
HTT-213ENST00000513806 CST5P28325 142 aaPredicted RBP12.77□□□□□ -0.37
HTT-213ENST00000513806 CPT1AP50416 773 aa12.77□□□□□ -0.37
HTT-213ENST00000513806 ATN1P54259 1190 aaPredicted RBP12.77□□□□□ -0.37
HTT-213ENST00000513806 NUCB2P80303 420 aa12.77□□□□□ -0.37
HTT-213ENST00000513806 ATP2C1P98194 919 aaPredicted RBP12.77□□□□□ -0.37
HTT-213ENST00000513806 PURAQ00577 322 aaKnown RBP12.77□□□□□ -0.37
HTT-213ENST00000513806 SWSAP1Q6NVH7 229 aa12.77□□□□□ -0.37
HTT-213ENST00000513806 ABHD15Q6UXT9 468 aa12.77□□□□□ -0.37
HTT-213ENST00000513806 MIER3Q7Z3K6 550 aa12.77□□□□□ -0.37
HTT-213ENST00000513806 ARRDC4Q8NCT1 418 aa12.77□□□□□ -0.37
HTT-213ENST00000513806 GIMAP8Q8ND71 665 aaPredicted RBP12.77□□□□□ -0.37
HTT-213ENST00000513806 BANK1Q8NDB2 785 aa12.77□□□□□ -0.37
HTT-213ENST00000513806 SEPT1Q8WYJ6 367 aa12.77□□□□□ -0.37
HTT-213ENST00000513806 VTI1AQ96AJ9 217 aa12.77□□□□□ -0.37
HTT-213ENST00000513806 FAM20AQ96MK3 541 aa12.77□□□□□ -0.37
HTT-213ENST00000513806 C16orf70Q9BSU1 422 aa12.77□□□□□ -0.37
HTT-213ENST00000513806 SENP6Q9GZR1 1112 aaPredicted RBP12.77□□□□□ -0.37
HTT-213ENST00000513806 DISC1Q9NRI5 854 aa12.77□□□□□ -0.37
HTT-213ENST00000513806 GABBR1Q9UBS5 961 aa12.77□□□□□ -0.37
HTT-213ENST00000513806 PCDHA12Q9UN75 941 aa12.77□□□□□ -0.37
HTT-213ENST00000513806 TMEM150BA6NC51 233 aa12.76□□□□□ -0.37
HTT-213ENST00000513806 DNM1LO00429 736 aa12.76□□□□□ -0.37
HTT-213ENST00000513806 BACH1O14867 736 aa12.76□□□□□ -0.37
HTT-213ENST00000513806 TBX3O15119 743 aa12.76□□□□□ -0.37
HTT-213ENST00000513806 NKX3-2P78367 333 aa12.76□□□□□ -0.37
HTT-213ENST00000513806 KRT76Q01546 638 aa12.76□□□□□ -0.37
HTT-213ENST00000513806 CYP4A11Q02928 519 aa12.76□□□□□ -0.37
HTT-213ENST00000513806 PPP2R5CQ13362 524 aa12.76□□□□□ -0.37
HTT-213ENST00000513806 CTTNQ14247 550 aaKnown RBP12.76□□□□□ -0.37
HTT-213ENST00000513806 STK38Q15208 465 aa12.76□□□□□ -0.37
HTT-213ENST00000513806 DGKDQ16760 1214 aa12.76□□□□□ -0.37
HTT-213ENST00000513806 ZNF746Q6NUN9 644 aaPredicted RBP12.76□□□□□ -0.37
HTT-213ENST00000513806 SLFN12Q8IYM2 578 aa12.76□□□□□ -0.37
HTT-213ENST00000513806 ZBTB10Q96DT7 871 aa12.76□□□□□ -0.37
HTT-213ENST00000513806 DYDC2Q96IM9 177 aa12.76□□□□□ -0.37
HTT-213ENST00000513806 ZNF396Q96N95 335 aaPredicted RBP12.76□□□□□ -0.37
HTT-213ENST00000513806 RGL1Q9NZL6 768 aa12.76□□□□□ -0.37
HTT-213ENST00000513806 CHMP5Q9NZZ3 219 aa12.76□□□□□ -0.37
HTT-213ENST00000513806 WRAP73Q9P2S5 460 aaPredicted RBP12.76□□□□□ -0.37
HTT-213ENST00000513806 TCEAL9Q9UHQ7 104 aa12.76□□□□□ -0.37
HTT-213ENST00000513806 PHF24Q9UPV7 400 aa12.76□□□□□ -0.37
HTT-213ENST00000513806 GRIN2DO15399 1336 aa12.76□□□□□ -0.37
HTT-213ENST00000513806 LOXHD1Q8IVV2 1947 aa12.76□□□□□ -0.37
HTT-213ENST00000513806 WDR64B1ANS9 1081 aa12.75□□□□□ -0.37
HTT-213ENST00000513806 LGR5O75473 907 aa12.75□□□□□ -0.37
HTT-213ENST00000513806 ATG7O95352 703 aa12.75□□□□□ -0.37
HTT-213ENST00000513806 HOXD8P13378 290 aaPredicted RBP12.75□□□□□ -0.37
HTT-213ENST00000513806 ATP4AP20648 1035 aa12.75□□□□□ -0.37
HTT-213ENST00000513806 NASPP49321 788 aaPredicted RBP12.75□□□□□ -0.37
HTT-213ENST00000513806 PSEN2P49810 448 aa12.75□□□□□ -0.37
HTT-213ENST00000513806 ORC2Q13416 577 aaPredicted RBP12.75□□□□□ -0.37
HTT-213ENST00000513806 HIC1Q14526 733 aa12.75□□□□□ -0.37
HTT-213ENST00000513806 MFSD10Q14728 455 aa12.75□□□□□ -0.37
HTT-213ENST00000513806 ECM1Q16610 540 aa12.75□□□□□ -0.37
HTT-213ENST00000513806 MIS18BP1Q6P0N0 1132 aa12.75□□□□□ -0.37
HTT-213ENST00000513806 DTHD1Q6ZMT9 781 aa12.75□□□□□ -0.37
HTT-213ENST00000513806 USP49Q70CQ1 688 aa12.75□□□□□ -0.37
HTT-213ENST00000513806 PCSK9Q8NBP7 692 aaKnown RBP12.75□□□□□ -0.37
HTT-213ENST00000513806 LINC00301Q8NCQ3 95 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms