RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 GALNT17Q6IS24 598 aa20.19■□□□□ 0.82
DDR1-272ENST00000513243 ZNF365Q70YC5 407 aa20.19■□□□□ 0.82
DDR1-272ENST00000513243 RNPC3Q96LT9 517 aaKnown RBP20.19■□□□□ 0.82
DDR1-272ENST00000513243 RNPEPQ9H4A4 650 aa20.19■□□□□ 0.82
DDR1-272ENST00000513243 ZNF215Q9UL58 517 aaPredicted RBP20.19■□□□□ 0.82
DDR1-272ENST00000513243 LAMA3Q16787 3333 aa20.19■□□□□ 0.82
DDR1-272ENST00000513243 IQCF3P0C7M6 154 aa20.18■□□□□ 0.82
DDR1-272ENST00000513243 HOXC8P31273 242 aa20.18■□□□□ 0.82
DDR1-272ENST00000513243 ST3GAL1Q11201 340 aa20.18■□□□□ 0.82
DDR1-272ENST00000513243 RETREG2Q8NC44 543 aa20.18■□□□□ 0.82
DDR1-272ENST00000513243 NSUN7Q8NE18 718 aaKnown RBP20.18■□□□□ 0.82
DDR1-272ENST00000513243 UIMC1Q96RL1 719 aa20.18■□□□□ 0.82
DDR1-272ENST00000513243 PHF20Q9BVI0 1012 aa20.18■□□□□ 0.82
DDR1-272ENST00000513243 LIMCH1Q9UPQ0 1083 aa20.18■□□□□ 0.82
DDR1-272ENST00000513243 C17orf102A2RUQ5 167 aa20.17■□□□□ 0.82
DDR1-272ENST00000513243 IPO5O00410 1097 aaKnown RBP20.17■□□□□ 0.82
DDR1-272ENST00000513243 DHX15O43143 795 aaKnown RBP20.17■□□□□ 0.82
DDR1-272ENST00000513243 USP11P51784 963 aa20.17■□□□□ 0.82
DDR1-272ENST00000513243 ACTR2P61160 394 aa20.17■□□□□ 0.82
DDR1-272ENST00000513243 PTK7Q13308 1070 aa20.17■□□□□ 0.82
DDR1-272ENST00000513243 PRR16Q569H4 304 aa20.17■□□□□ 0.82
DDR1-272ENST00000513243 PSRC1Q6PGN9 363 aaPredicted RBP20.17■□□□□ 0.82
DDR1-272ENST00000513243 CAGE1Q8TC20 777 aa20.17■□□□□ 0.82
DDR1-272ENST00000513243 TBCKQ8TEA7 893 aa20.17■□□□□ 0.82
DDR1-272ENST00000513243 WNT8BQ93098 351 aa20.17■□□□□ 0.82
DDR1-272ENST00000513243 LENG9Q96B70 501 aa20.17■□□□□ 0.82
DDR1-272ENST00000513243 PCYT2Q99447 389 aa20.17■□□□□ 0.82
DDR1-272ENST00000513243 SETD4Q9NVD3 440 aa20.17■□□□□ 0.82
DDR1-272ENST00000513243 DDX39AO00148 427 aaKnown RBP20.16■□□□□ 0.82
DDR1-272ENST00000513243 JAK2O60674 1132 aa20.16■□□□□ 0.82
DDR1-272ENST00000513243 LGR5O75473 907 aa20.16■□□□□ 0.82
DDR1-272ENST00000513243 CCNE2O96020 404 aa20.16■□□□□ 0.82
DDR1-272ENST00000513243 FGBP02675 491 aa20.16■□□□□ 0.82
DDR1-272ENST00000513243 XBP1P17861 261 aa20.16■□□□□ 0.82
DDR1-272ENST00000513243 SETQ01105 290 aaPredicted RBP20.16■□□□□ 0.82
DDR1-272ENST00000513243 RBL2Q08999 1139 aa20.16■□□□□ 0.82
DDR1-272ENST00000513243 TRIM71Q2Q1W2 868 aaKnown RBP20.16■□□□□ 0.82
DDR1-272ENST00000513243 RASIP1Q5U651 963 aa20.16■□□□□ 0.82
DDR1-272ENST00000513243 SERINC5Q86VE9 423 aa20.16■□□□□ 0.82
DDR1-272ENST00000513243 RPUSD2Q8IZ73 545 aaKnown RBP20.16■□□□□ 0.82
DDR1-272ENST00000513243 CCDC155Q8N6L0 562 aa20.16■□□□□ 0.82
DDR1-272ENST00000513243 WASF1Q92558 559 aa20.16■□□□□ 0.82
DDR1-272ENST00000513243 GLG1Q92896 1179 aa20.16■□□□□ 0.82
DDR1-272ENST00000513243 ATP6V0A1Q93050 837 aa20.16■□□□□ 0.82
DDR1-272ENST00000513243 ZNF577Q9BSK1 485 aa20.16■□□□□ 0.82
DDR1-272ENST00000513243 SMARCAD1Q9H4L7 1026 aa20.16■□□□□ 0.82
DDR1-272ENST00000513243 TREHO43280 583 aa20.15■□□□□ 0.82
DDR1-272ENST00000513243 ATG7O95352 703 aa20.15■□□□□ 0.82
DDR1-272ENST00000513243 CKBP12277 381 aa20.15■□□□□ 0.82
DDR1-272ENST00000513243 MARK3P27448 753 aa20.15■□□□□ 0.82
DDR1-272ENST00000513243 GPR153Q6NV75 609 aa20.15■□□□□ 0.82
DDR1-272ENST00000513243 DEFB128Q7Z7B8 93 aa20.15■□□□□ 0.82
DDR1-272ENST00000513243 AFAP1L1Q8TED9 768 aa20.15■□□□□ 0.82
DDR1-272ENST00000513243 HERVK_113Q902F9 699 aa20.15■□□□□ 0.82
DDR1-272ENST00000513243 ERAP1Q9NZ08 941 aa20.15■□□□□ 0.82
DDR1-272ENST00000513243 EMSYQ7Z589 1322 aa20.15■□□□□ 0.82
DDR1-272ENST00000513243 SELPP16109 830 aa20.14■□□□□ 0.81
DDR1-272ENST00000513243 RFC2P35250 354 aa20.14■□□□□ 0.81
DDR1-272ENST00000513243 ADAM17P78536 824 aa20.14■□□□□ 0.81
DDR1-272ENST00000513243 GPNMBQ14956 572 aa20.14■□□□□ 0.81
DDR1-272ENST00000513243 LRRC8DQ7L1W4 858 aa20.14■□□□□ 0.81
DDR1-272ENST00000513243 OTOP2Q7RTS6 562 aa20.14■□□□□ 0.81
DDR1-272ENST00000513243 KRT25Q7Z3Z0 450 aa20.14■□□□□ 0.81
DDR1-272ENST00000513243 OXER1Q8TDS5 423 aa20.14■□□□□ 0.81
DDR1-272ENST00000513243 LMBR1Q8WVP7 490 aa20.14■□□□□ 0.81
DDR1-272ENST00000513243 TBC1D22BQ9NU19 505 aa20.14■□□□□ 0.81
DDR1-272ENST00000513243 CXXC1Q9P0U4 656 aaPredicted RBP20.14■□□□□ 0.81
DDR1-272ENST00000513243 TRIP12Q14669 1992 aaPredicted RBP20.14■□□□□ 0.81
DDR1-272ENST00000513243 NRCAMQ92823 1304 aa20.13■□□□□ 0.81
DDR1-272ENST00000513243 PFKMP08237 780 aa20.13■□□□□ 0.81
DDR1-272ENST00000513243 GNAT1P11488 350 aa20.13■□□□□ 0.81
DDR1-272ENST00000513243 NONOQ15233 471 aaKnown RBP eCLIP20.13■□□□□ 0.81
DDR1-272ENST00000513243 TRAF7Q6Q0C0 670 aa20.13■□□□□ 0.81
DDR1-272ENST00000513243 ABHD15Q6UXT9 468 aa20.13■□□□□ 0.81
DDR1-272ENST00000513243 CCDC83Q8IWF9 413 aa20.13■□□□□ 0.81
DDR1-272ENST00000513243 AZI2Q9H6S1 392 aa20.13■□□□□ 0.81
DDR1-272ENST00000513243 UPF2Q9HAU5 1272 aaKnown RBP20.13■□□□□ 0.81
DDR1-272ENST00000513243 CYP3A7-CYP3A51PA0A087WV96 503 aa20.12■□□□□ 0.81
DDR1-272ENST00000513243 IGKV6D-21A0A0A0MT36 114 aa20.12■□□□□ 0.81
DDR1-272ENST00000513243 MSH4O15457 936 aa20.12■□□□□ 0.81
DDR1-272ENST00000513243 TDP2O95551 362 aa20.12■□□□□ 0.81
DDR1-272ENST00000513243 CYP3A7P24462 503 aa20.12■□□□□ 0.81
DDR1-272ENST00000513243 STAT5BP51692 787 aa20.12■□□□□ 0.81
DDR1-272ENST00000513243 SMAD3P84022 425 aaKnown RBP20.12■□□□□ 0.81
DDR1-272ENST00000513243 RABEP1Q15276 862 aa20.12■□□□□ 0.81
DDR1-272ENST00000513243 INF2Q27J81 1249 aa20.12■□□□□ 0.81
DDR1-272ENST00000513243 ZNF618Q5T7W0 954 aa20.12■□□□□ 0.81
DDR1-272ENST00000513243 FAM109BQ6ICB4 259 aaPredicted RBP20.12■□□□□ 0.81
DDR1-272ENST00000513243 PLPPR4Q7Z2D5 763 aa20.12■□□□□ 0.81
DDR1-272ENST00000513243 ZSCAN31Q96LW9 406 aaPredicted RBP20.12■□□□□ 0.81
DDR1-272ENST00000513243 SCN5AQ14524 2016 aa20.12■□□□□ 0.81
DDR1-272ENST00000513243 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.11■□□□□ 0.81
DDR1-272ENST00000513243 CCDC194A0A1B0GVG4 234 aa20.11■□□□□ 0.81
DDR1-272ENST00000513243 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.11■□□□□ 0.81
DDR1-272ENST00000513243 THPOP40225 353 aa20.11■□□□□ 0.81
DDR1-272ENST00000513243 PPFIA1Q13136 1202 aa20.11■□□□□ 0.81
DDR1-272ENST00000513243 GRIK4Q16099 956 aa20.11■□□□□ 0.81
DDR1-272ENST00000513243 Q4G0T1 1027 aa20.11■□□□□ 0.81
DDR1-272ENST00000513243 MBOAT7Q96N66 472 aa20.11■□□□□ 0.81
DDR1-272ENST00000513243 SZT2Q5T011 3432 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms