RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 KAT14Q9H8E8 782 aa16.18■□□□□ 0.18
SPCS3-204ENST00000513139 BAZ2BQ9UIF8 2168 aaKnown RBP16.18■□□□□ 0.18
SPCS3-204ENST00000513139 PTPRZ1P23471 2315 aaPredicted RBP16.18■□□□□ 0.18
SPCS3-204ENST00000513139 ADGRA3Q8IWK6 1321 aa16.18■□□□□ 0.18
SPCS3-204ENST00000513139 LOXHD1Q8IVV2 1947 aa16.17■□□□□ 0.18
SPCS3-204ENST00000513139 TMEM221A6NGB7 291 aa16.17■□□□□ 0.18
SPCS3-204ENST00000513139 M0R296 226 aa16.17■□□□□ 0.18
SPCS3-204ENST00000513139 DHX16O60231 1041 aaKnown RBP16.17■□□□□ 0.18
SPCS3-204ENST00000513139 MMP1P03956 469 aa16.17■□□□□ 0.18
SPCS3-204ENST00000513139 LGALS2P05162 132 aa16.17■□□□□ 0.18
SPCS3-204ENST00000513139 CTSHP09668 335 aa16.17■□□□□ 0.18
SPCS3-204ENST00000513139 PARP1P09874 1014 aaKnown RBP16.17■□□□□ 0.18
SPCS3-204ENST00000513139 NUBP1P53384 320 aa16.17■□□□□ 0.18
SPCS3-204ENST00000513139 PBXIP1Q96AQ6 731 aa16.17■□□□□ 0.18
SPCS3-204ENST00000513139 MSLNLQ96KJ4 702 aa16.17■□□□□ 0.18
SPCS3-204ENST00000513139 RC3H2Q9HBD1 1191 aaKnown RBP16.17■□□□□ 0.18
SPCS3-204ENST00000513139 NEDD4P46934 1319 aa16.17■□□□□ 0.18
SPCS3-204ENST00000513139 CCND2P30279 289 aa16.16■□□□□ 0.18
SPCS3-204ENST00000513139 ADAM17P78536 824 aa16.16■□□□□ 0.18
SPCS3-204ENST00000513139 IER5LQ5T953 404 aa16.16■□□□□ 0.18
SPCS3-204ENST00000513139 ZNF589Q86UQ0 364 aaPredicted RBP16.16■□□□□ 0.18
SPCS3-204ENST00000513139 SUGP1Q8IWZ8 645 aaKnown RBP16.16■□□□□ 0.18
SPCS3-204ENST00000513139 P2RX5Q93086 422 aa16.16■□□□□ 0.18
SPCS3-204ENST00000513139 PPP2R3CQ969Q6 453 aa16.16■□□□□ 0.18
SPCS3-204ENST00000513139 RIF1Q5UIP0 2472 aaKnown RBP16.16■□□□□ 0.18
SPCS3-204ENST00000513139 NOP56O00567 594 aaKnown RBP16.15■□□□□ 0.18
SPCS3-204ENST00000513139 SORBS3O60504 671 aa16.15■□□□□ 0.18
SPCS3-204ENST00000513139 MFAP1P55081 439 aaKnown RBP16.15■□□□□ 0.18
SPCS3-204ENST00000513139 NAALADL2Q58DX5 795 aa16.15■□□□□ 0.18
SPCS3-204ENST00000513139 SMRP1Q8NCR6 262 aa16.15■□□□□ 0.18
SPCS3-204ENST00000513139 ZNF689Q96CS4 500 aaPredicted RBP16.15■□□□□ 0.18
SPCS3-204ENST00000513139 MTMR8Q96EF0 704 aa16.15■□□□□ 0.18
SPCS3-204ENST00000513139 ZSCAN10Q96SZ4 725 aaPredicted RBP16.15■□□□□ 0.18
SPCS3-204ENST00000513139 EHMT1Q9H9B1 1298 aa16.15■□□□□ 0.18
SPCS3-204ENST00000513139 VAT1LQ9HCJ6 419 aa16.15■□□□□ 0.18
SPCS3-204ENST00000513139 SETD4Q9NVD3 440 aa16.15■□□□□ 0.18
SPCS3-204ENST00000513139 LOC730098B7Z3J9 87 aa16.14■□□□□ 0.17
SPCS3-204ENST00000513139 ZNF213O14771 459 aa16.14■□□□□ 0.17
SPCS3-204ENST00000513139 KDM4AO75164 1064 aa16.14■□□□□ 0.17
SPCS3-204ENST00000513139 STAM2O75886 525 aa16.14■□□□□ 0.17
SPCS3-204ENST00000513139 GTF2F1P35269 517 aaKnown RBP eCLIP16.14■□□□□ 0.17
SPCS3-204ENST00000513139 ZXDAP98168 799 aa16.14■□□□□ 0.17
SPCS3-204ENST00000513139 TCF15Q12870 199 aa16.14■□□□□ 0.17
SPCS3-204ENST00000513139 COASYQ13057 564 aa16.14■□□□□ 0.17
SPCS3-204ENST00000513139 TRAF1Q13077 416 aa16.14■□□□□ 0.17
SPCS3-204ENST00000513139 CAMK1Q14012 370 aa16.14■□□□□ 0.17
SPCS3-204ENST00000513139 CBX2Q14781 532 aaPredicted RBP16.14■□□□□ 0.17
SPCS3-204ENST00000513139 GNPTABQ3T906 1256 aa16.14■□□□□ 0.17
SPCS3-204ENST00000513139 FBXL6Q8N531 539 aa16.14■□□□□ 0.17
SPCS3-204ENST00000513139 ENAHQ8N8S7 591 aaPredicted RBP16.14■□□□□ 0.17
SPCS3-204ENST00000513139 IL31RAQ8NI17 732 aa16.14■□□□□ 0.17
SPCS3-204ENST00000513139 IRF2BPLQ9H1B7 796 aa16.14■□□□□ 0.17
SPCS3-204ENST00000513139 IGFLR1Q9H665 355 aa16.14■□□□□ 0.17
SPCS3-204ENST00000513139 ZNF215Q9UL58 517 aaPredicted RBP16.14■□□□□ 0.17
SPCS3-204ENST00000513139 PLAGL2Q9UPG8 496 aa16.14■□□□□ 0.17
SPCS3-204ENST00000513139 PCDHB15Q9Y5E8 787 aa16.14■□□□□ 0.17
SPCS3-204ENST00000513139 NRCAMQ92823 1304 aa16.14■□□□□ 0.17
SPCS3-204ENST00000513139 PLXNA4Q9HCM2 1894 aa16.14■□□□□ 0.17
SPCS3-204ENST00000513139 TRIM6-TRIM34B2RNG4 842 aa16.13■□□□□ 0.17
SPCS3-204ENST00000513139 ENPP3O14638 875 aa16.13■□□□□ 0.17
SPCS3-204ENST00000513139 ZBTB5O15062 677 aa16.13■□□□□ 0.17
SPCS3-204ENST00000513139 LINC01565O15544 149 aa16.13■□□□□ 0.17
SPCS3-204ENST00000513139 CHRNA1P02708 482 aa16.13■□□□□ 0.17
SPCS3-204ENST00000513139 HOXA13P31271 388 aaPredicted RBP16.13■□□□□ 0.17
SPCS3-204ENST00000513139 ICAM3P32942 547 aa16.13■□□□□ 0.17
SPCS3-204ENST00000513139 NDUFV1P49821 464 aa16.13■□□□□ 0.17
SPCS3-204ENST00000513139 PDE1AP54750 535 aa16.13■□□□□ 0.17
SPCS3-204ENST00000513139 FOXK2Q01167 660 aa16.13■□□□□ 0.17
SPCS3-204ENST00000513139 NMIQ13287 307 aaPredicted RBP16.13■□□□□ 0.17
SPCS3-204ENST00000513139 BTG3Q14201 252 aaPredicted RBP16.13■□□□□ 0.17
SPCS3-204ENST00000513139 NEDD9Q14511 834 aa16.13■□□□□ 0.17
SPCS3-204ENST00000513139 METTL7BQ6UX53 244 aa16.13■□□□□ 0.17
SPCS3-204ENST00000513139 EFHBQ8N7U6 833 aa16.13■□□□□ 0.17
SPCS3-204ENST00000513139 EXOC6Q8TAG9 804 aa16.13■□□□□ 0.17
SPCS3-204ENST00000513139 GPKOWQ92917 476 aaPredicted RBP eCLIP16.13■□□□□ 0.172e-6■■■□□ 15.9
SPCS3-204ENST00000513139 FARP1Q9Y4F1 1045 aaPredicted RBP16.13■□□□□ 0.17
SPCS3-204ENST00000513139 PCDHA1Q9Y5I3 950 aa16.13■□□□□ 0.17
SPCS3-204ENST00000513139 VPS13AQ96RL7 3174 aa16.13■□□□□ 0.17
SPCS3-204ENST00000513139 FAM186AA6NE01 2351 aa16.13■□□□□ 0.17
SPCS3-204ENST00000513139 MYO15AQ9UKN7 3530 aa16.12■□□□□ 0.17
SPCS3-204ENST00000513139 PPP1R11O60927 126 aaPredicted RBP16.12■□□□□ 0.17
SPCS3-204ENST00000513139 DGKIO75912 1065 aa16.12■□□□□ 0.17
SPCS3-204ENST00000513139 TAF2Q6P1X5 1199 aa16.12■□□□□ 0.17
SPCS3-204ENST00000513139 LMBR1Q8WVP7 490 aa16.12■□□□□ 0.17
SPCS3-204ENST00000513139 INPP4AQ96PE3 977 aaPredicted RBP16.12■□□□□ 0.17
SPCS3-204ENST00000513139 GPR20Q99678 358 aa16.12■□□□□ 0.17
SPCS3-204ENST00000513139 BCAS3Q9H6U6 928 aa16.12■□□□□ 0.17
SPCS3-204ENST00000513139 ALG13Q9NP73 1137 aaKnown RBP16.12■□□□□ 0.17
SPCS3-204ENST00000513139 CLEC1BQ9P126 229 aa16.12■□□□□ 0.17
SPCS3-204ENST00000513139 ZSWIM5Q9P217 1185 aa16.12■□□□□ 0.17
SPCS3-204ENST00000513139 MYO10Q9HD67 2058 aa16.12■□□□□ 0.17
SPCS3-204ENST00000513139 PLXNA3P51805 1871 aa16.12■□□□□ 0.17
SPCS3-204ENST00000513139 SPATA31C2B4DYI2 1134 aa16.11■□□□□ 0.17
SPCS3-204ENST00000513139 KLRF2D3W0D1 207 aa16.11■□□□□ 0.17
SPCS3-204ENST00000513139 GCOM1H8Y6P7 765 aaPredicted RBP16.11■□□□□ 0.17
SPCS3-204ENST00000513139 POLR2MP0CAP2 368 aa16.11■□□□□ 0.17
SPCS3-204ENST00000513139 GHRP10912 638 aa16.11■□□□□ 0.17
SPCS3-204ENST00000513139 ARHGAP4P98171 946 aa16.11■□□□□ 0.17
SPCS3-204ENST00000513139 SIGLEC14Q08ET2 396 aa16.11■□□□□ 0.17
SPCS3-204ENST00000513139 CYFIP1Q7L576 1253 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms