RNA–Protein interactions for RNA: ENST00000513069.1

SH3BP2-225, Transcript of SH3 domain binding protein 2, humanhuman

TSL 3

Gene SH3BP2, Length 866 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-225ENST00000513069 ACTR2P61160 394 aa17.27■□□□□ 0.36
SH3BP2-225ENST00000513069 NR5A1Q13285 461 aa17.27■□□□□ 0.36
SH3BP2-225ENST00000513069 INF2Q27J81 1249 aa17.27■□□□□ 0.36
SH3BP2-225ENST00000513069 UTP14CQ5TAP6 766 aaKnown RBP17.27■□□□□ 0.36
SH3BP2-225ENST00000513069 KRT40Q6A162 431 aa17.27■□□□□ 0.36
SH3BP2-225ENST00000513069 MFSD5Q6N075 450 aa17.27■□□□□ 0.36
SH3BP2-225ENST00000513069 KRT25Q7Z3Z0 450 aa17.27■□□□□ 0.36
SH3BP2-225ENST00000513069 IL27Q8NEV9 243 aa17.27■□□□□ 0.36
SH3BP2-225ENST00000513069 VWCEQ96DN2 955 aa17.27■□□□□ 0.36
SH3BP2-225ENST00000513069 TMX3Q96JJ7 454 aa17.27■□□□□ 0.36
SH3BP2-225ENST00000513069 MBOAT7Q96N66 472 aa17.27■□□□□ 0.36
SH3BP2-225ENST00000513069 PPP1R12CQ9BZL4 782 aa17.27■□□□□ 0.36
SH3BP2-225ENST00000513069 HIPK3Q9H422 1215 aa17.27■□□□□ 0.36
SH3BP2-225ENST00000513069 RNPEPQ9H4A4 650 aa17.27■□□□□ 0.36
SH3BP2-225ENST00000513069 LAMA3Q16787 3333 aa17.27■□□□□ 0.35
SH3BP2-225ENST00000513069 MSH4O15457 936 aa17.26■□□□□ 0.35
SH3BP2-225ENST00000513069 LGR5O75473 907 aa17.26■□□□□ 0.35
SH3BP2-225ENST00000513069 TDP2O95551 362 aa17.26■□□□□ 0.35
SH3BP2-225ENST00000513069 MMP1P03956 469 aa17.26■□□□□ 0.35
SH3BP2-225ENST00000513069 FOSBP53539 338 aa17.26■□□□□ 0.35
SH3BP2-225ENST00000513069 NONOQ15233 471 aaKnown RBP eCLIP17.26■□□□□ 0.35
SH3BP2-225ENST00000513069 PTGISQ16647 500 aa17.26■□□□□ 0.35
SH3BP2-225ENST00000513069 C16orf59Q7L2K0 433 aa17.26■□□□□ 0.35
SH3BP2-225ENST00000513069 C7orf31Q8N865 590 aa17.26■□□□□ 0.35
SH3BP2-225ENST00000513069 DHX38Q92620 1227 aaKnown RBP17.26■□□□□ 0.35
SH3BP2-225ENST00000513069 SDF4Q9BRK5 362 aa17.26■□□□□ 0.35
SH3BP2-225ENST00000513069 ZNF577Q9BSK1 485 aa17.26■□□□□ 0.35
SH3BP2-225ENST00000513069 WNT8AQ9H1J5 351 aa17.26■□□□□ 0.35
SH3BP2-225ENST00000513069 TRIOBPQ9H2D6 2365 aa17.26■□□□□ 0.35
SH3BP2-225ENST00000513069 IGKV6D-21A0A0A0MT36 114 aa17.25■□□□□ 0.35
SH3BP2-225ENST00000513069 BTBD18B2RXH4 712 aa17.25■□□□□ 0.35
SH3BP2-225ENST00000513069 SMIM10L2AP0DMW4 78 aa17.25■□□□□ 0.35
SH3BP2-225ENST00000513069 SMIM10L2BP0DMW5 78 aa17.25■□□□□ 0.35
SH3BP2-225ENST00000513069 SETQ01105 290 aaPredicted RBP17.25■□□□□ 0.35
SH3BP2-225ENST00000513069 Q4G0T1 1027 aa17.25■□□□□ 0.35
SH3BP2-225ENST00000513069 ABHD15Q6UXT9 468 aa17.25■□□□□ 0.35
SH3BP2-225ENST00000513069 PIK3AP1Q6ZUJ8 805 aa17.25■□□□□ 0.35
SH3BP2-225ENST00000513069 WNT8BQ93098 351 aa17.25■□□□□ 0.35
SH3BP2-225ENST00000513069 GJA10Q969M2 543 aa17.25■□□□□ 0.35
SH3BP2-225ENST00000513069 A0A1W2PPC1 479 aa17.24■□□□□ 0.35
SH3BP2-225ENST00000513069 RBAK-RBAKDNI3L0D1 243 aa17.24■□□□□ 0.35
SH3BP2-225ENST00000513069 DDX39AO00148 427 aaKnown RBP17.24■□□□□ 0.35
SH3BP2-225ENST00000513069 CSF2RAP15509 400 aa17.24■□□□□ 0.35
SH3BP2-225ENST00000513069 KRT2P35908 639 aa17.24■□□□□ 0.35
SH3BP2-225ENST00000513069 CCL23P55773 120 aa17.24■□□□□ 0.35
SH3BP2-225ENST00000513069 ADAM17P78536 824 aa17.24■□□□□ 0.35
SH3BP2-225ENST00000513069 SHHQ15465 462 aa17.24■□□□□ 0.35
SH3BP2-225ENST00000513069 TRIM71Q2Q1W2 868 aaKnown RBP17.24■□□□□ 0.35
SH3BP2-225ENST00000513069 C9orf50Q5SZB4 431 aa17.24■□□□□ 0.35
SH3BP2-225ENST00000513069 MOXD1Q6UVY6 613 aa17.24■□□□□ 0.35
SH3BP2-225ENST00000513069 TDHQ8IZJ6 230 aa17.24■□□□□ 0.35
SH3BP2-225ENST00000513069 SLC5A5Q92911 643 aa17.24■□□□□ 0.35
SH3BP2-225ENST00000513069 LAMA2P24043 3122 aaKnown RBP17.24■□□□□ 0.35
SH3BP2-225ENST00000513069 EMSYQ7Z589 1322 aa17.23■□□□□ 0.35
SH3BP2-225ENST00000513069 CCDC194A0A1B0GVG4 234 aa17.23■□□□□ 0.35
SH3BP2-225ENST00000513069 SLC37A4O43826 429 aa17.23■□□□□ 0.35
SH3BP2-225ENST00000513069 HMGN5P82970 282 aaKnown RBP17.23■□□□□ 0.35
SH3BP2-225ENST00000513069 GUCY1B3Q02153 619 aa17.23■□□□□ 0.35
SH3BP2-225ENST00000513069 FPGSQ05932 587 aa17.23■□□□□ 0.35
SH3BP2-225ENST00000513069 NEK8Q86SG6 692 aa17.23■□□□□ 0.35
SH3BP2-225ENST00000513069 DIS3L2Q8IYB7 885 aaKnown RBP17.23■□□□□ 0.35
SH3BP2-225ENST00000513069 ETNPPLQ8TBG4 499 aa17.23■□□□□ 0.35
SH3BP2-225ENST00000513069 SMARCAD1Q9H4L7 1026 aa17.23■□□□□ 0.35
SH3BP2-225ENST00000513069 TBC1D22BQ9NU19 505 aa17.23■□□□□ 0.35
SH3BP2-225ENST00000513069 SETD4Q9NVD3 440 aa17.23■□□□□ 0.35
SH3BP2-225ENST00000513069 WNT7AO00755 349 aa17.22■□□□□ 0.35
SH3BP2-225ENST00000513069 PSMD10O75832 226 aa17.22■□□□□ 0.35
SH3BP2-225ENST00000513069 MARK3P27448 753 aa17.22■□□□□ 0.35
SH3BP2-225ENST00000513069 MCM2P49736 904 aa17.22■□□□□ 0.35
SH3BP2-225ENST00000513069 RBL2Q08999 1139 aa17.22■□□□□ 0.35
SH3BP2-225ENST00000513069 GPNMBQ14956 572 aa17.22■□□□□ 0.35
SH3BP2-225ENST00000513069 LETM2Q2VYF4 491 aa17.22■□□□□ 0.35
SH3BP2-225ENST00000513069 PPP4R3AQ6IN85 833 aa17.22■□□□□ 0.35
SH3BP2-225ENST00000513069 B3GNT9Q6UX72 402 aa17.22■□□□□ 0.35
SH3BP2-225ENST00000513069 PLPPR4Q7Z2D5 763 aa17.22■□□□□ 0.35
SH3BP2-225ENST00000513069 SERINC5Q86VE9 423 aa17.22■□□□□ 0.35
SH3BP2-225ENST00000513069 TMEM199Q8N511 208 aa17.22■□□□□ 0.35
SH3BP2-225ENST00000513069 FBXO18Q8NFZ0 1043 aa17.22■□□□□ 0.35
SH3BP2-225ENST00000513069 GLG1Q92896 1179 aa17.22■□□□□ 0.35
SH3BP2-225ENST00000513069 SCLYQ96I15 445 aa17.22■□□□□ 0.35
SH3BP2-225ENST00000513069 C8orf76Q96K31 380 aa17.22■□□□□ 0.35
SH3BP2-225ENST00000513069 RIT2Q99578 217 aa17.22■□□□□ 0.35
SH3BP2-225ENST00000513069 ERAP1Q9NZ08 941 aa17.22■□□□□ 0.35
SH3BP2-225ENST00000513069 ZNF215Q9UL58 517 aaPredicted RBP17.22■□□□□ 0.35
SH3BP2-225ENST00000513069 C17orf102A2RUQ5 167 aa17.21■□□□□ 0.35
SH3BP2-225ENST00000513069 PITPNM1O00562 1244 aa17.21■□□□□ 0.35
SH3BP2-225ENST00000513069 SOX1O00570 391 aaPredicted RBP17.21■□□□□ 0.35
SH3BP2-225ENST00000513069 TREHO43280 583 aa17.21■□□□□ 0.35
SH3BP2-225ENST00000513069 IQCF3P0C7M6 154 aa17.21■□□□□ 0.35
SH3BP2-225ENST00000513069 ATP4AP20648 1035 aa17.21■□□□□ 0.35
SH3BP2-225ENST00000513069 FXR1P51114 621 aaKnown RBP eCLIP17.21■□□□□ 0.35
SH3BP2-225ENST00000513069 STAT5BP51692 787 aa17.21■□□□□ 0.35
SH3BP2-225ENST00000513069 PTK7Q13308 1070 aa17.21■□□□□ 0.35
SH3BP2-225ENST00000513069 TRIM29Q14134 588 aa17.21■□□□□ 0.35
SH3BP2-225ENST00000513069 ZNF746Q6NUN9 644 aaPredicted RBP17.21■□□□□ 0.35
SH3BP2-225ENST00000513069 TRAF7Q6Q0C0 670 aa17.21■□□□□ 0.35
SH3BP2-225ENST00000513069 CCDC60Q8IWA6 550 aaPredicted RBP17.21■□□□□ 0.35
SH3BP2-225ENST00000513069 DDX25Q9UHL0 483 aaKnown RBP17.21■□□□□ 0.35
SH3BP2-225ENST00000513069 NOD1Q9Y239 953 aa17.21■□□□□ 0.35
SH3BP2-225ENST00000513069 ACRP10323 421 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms