RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 PATJQ8NI35 1801 aa11.16□□□□□ -0.62
CLCN3-208ENST00000512813 PPFIA3O75145 1194 aa11.16□□□□□ -0.62
CLCN3-208ENST00000512813 G3BP1Q13283 466 aaKnown RBP eCLIP11.16□□□□□ -0.62
CLCN3-208ENST00000512813 CHURC1Q8WUH1 139 aa11.16□□□□□ -0.62
CLCN3-208ENST00000512813 ATRIPQ8WXE1 791 aa11.16□□□□□ -0.62
CLCN3-208ENST00000512813 MKL1Q969V6 931 aa11.16□□□□□ -0.62
CLCN3-208ENST00000512813 EMID1Q96A84 441 aaPredicted RBP11.16□□□□□ -0.62
CLCN3-208ENST00000512813 TMEM121BQ9BXQ6 578 aaPredicted RBP11.16□□□□□ -0.62
CLCN3-208ENST00000512813 KCNK12Q9HB15 430 aa11.16□□□□□ -0.62
CLCN3-208ENST00000512813 CLIP2Q9UDT6 1046 aa11.16□□□□□ -0.62
CLCN3-208ENST00000512813 USP9XQ93008 2570 aaPredicted RBP11.15□□□□□ -0.62
CLCN3-208ENST00000512813 IGKV6D-41A0A0C4DH26 115 aa11.15□□□□□ -0.62
CLCN3-208ENST00000512813 NFIBO00712 420 aa11.15□□□□□ -0.62
CLCN3-208ENST00000512813 ENPP3O14638 875 aa11.15□□□□□ -0.62
CLCN3-208ENST00000512813 NARSO43776 548 aaKnown RBP11.15□□□□□ -0.62
CLCN3-208ENST00000512813 PLA2G6O60733 806 aa11.15□□□□□ -0.62
CLCN3-208ENST00000512813 LRP3O75074 770 aa11.15□□□□□ -0.62
CLCN3-208ENST00000512813 CFHP08603 1231 aa11.15□□□□□ -0.62
CLCN3-208ENST00000512813 HOXD8P13378 290 aaPredicted RBP11.15□□□□□ -0.62
CLCN3-208ENST00000512813 GLULP15104 373 aa11.15□□□□□ -0.62
CLCN3-208ENST00000512813 PDE6AP16499 860 aa11.15□□□□□ -0.62
CLCN3-208ENST00000512813 RASA1P20936 1047 aa11.15□□□□□ -0.62
CLCN3-208ENST00000512813 FAM26DQ5JW98 314 aa11.15□□□□□ -0.62
CLCN3-208ENST00000512813 XRRA1Q6P2D8 792 aa11.15□□□□□ -0.62
CLCN3-208ENST00000512813 SLC30A10Q6XR72 485 aa11.15□□□□□ -0.62
CLCN3-208ENST00000512813 PRR23BQ6ZRT6 265 aa11.15□□□□□ -0.62
CLCN3-208ENST00000512813 CHST3Q7LGC8 479 aa11.15□□□□□ -0.62
CLCN3-208ENST00000512813 DNERQ8NFT8 737 aa11.15□□□□□ -0.62
CLCN3-208ENST00000512813 STAG1Q8WVM7 1258 aa11.15□□□□□ -0.62
CLCN3-208ENST00000512813 ATP6V0A1Q93050 837 aa11.15□□□□□ -0.62
CLCN3-208ENST00000512813 ACSF2Q96CM8 615 aaPredicted RBP11.15□□□□□ -0.62
CLCN3-208ENST00000512813 MEIS3Q99687 375 aa11.15□□□□□ -0.62
CLCN3-208ENST00000512813 DBNLQ9UJU6 430 aaKnown RBP11.15□□□□□ -0.62
CLCN3-208ENST00000512813 DBR1Q9UK59 544 aaKnown RBP11.15□□□□□ -0.62
CLCN3-208ENST00000512813 MYO18BQ8IUG5 2567 aa11.15□□□□□ -0.63
CLCN3-208ENST00000512813 PTPDC1A2A3K4 754 aa11.14□□□□□ -0.63
CLCN3-208ENST00000512813 C17orf102A2RUQ5 167 aa11.14□□□□□ -0.63
CLCN3-208ENST00000512813 PRKAB2O43741 272 aa11.14□□□□□ -0.63
CLCN3-208ENST00000512813 FGF18O76093 207 aa11.14□□□□□ -0.63
CLCN3-208ENST00000512813 ICAM1P05362 532 aa11.14□□□□□ -0.63
CLCN3-208ENST00000512813 WEE2P0C1S8 567 aa11.14□□□□□ -0.63
CLCN3-208ENST00000512813 SPEM2Q0P670 501 aa11.14□□□□□ -0.63
CLCN3-208ENST00000512813 IKQ13123 557 aaPredicted RBP11.14□□□□□ -0.63
CLCN3-208ENST00000512813 LY6KQ17RY6 165 aa11.14□□□□□ -0.63
CLCN3-208ENST00000512813 PAN2Q504Q3 1202 aaKnown RBP11.14□□□□□ -0.63
CLCN3-208ENST00000512813 PLPP4Q5VZY2 271 aa11.14□□□□□ -0.63
CLCN3-208ENST00000512813 SLFN13Q68D06 897 aa11.14□□□□□ -0.63
CLCN3-208ENST00000512813 RASGRP2Q7LDG7 609 aa11.14□□□□□ -0.63
CLCN3-208ENST00000512813 PPTC7Q8NI37 304 aa11.14□□□□□ -0.63
CLCN3-208ENST00000512813 NELL1Q92832 810 aa11.14□□□□□ -0.63
CLCN3-208ENST00000512813 ARMT1Q9H993 441 aa11.14□□□□□ -0.63
CLCN3-208ENST00000512813 ZSCAN32Q9NX65 697 aa11.14□□□□□ -0.63
CLCN3-208ENST00000512813 IGSF9Q9P2J2 1179 aa11.14□□□□□ -0.63
CLCN3-208ENST00000512813 CA14Q9ULX7 337 aa11.14□□□□□ -0.63
CLCN3-208ENST00000512813 PCDHB12Q9Y5F1 795 aa11.14□□□□□ -0.63
CLCN3-208ENST00000512813 HECTD1Q9ULT8 2610 aa11.14□□□□□ -0.63
CLCN3-208ENST00000512813 ZBED9Q6R2W3 1325 aa11.13□□□□□ -0.63
CLCN3-208ENST00000512813 ZNF532Q9HCE3 1301 aa11.13□□□□□ -0.63
CLCN3-208ENST00000512813 TCRBV5S4A2TA0A5A2 114 aa11.13□□□□□ -0.63
CLCN3-208ENST00000512813 CALML3P27482 149 aa11.13□□□□□ -0.63
CLCN3-208ENST00000512813 ATAT1Q5SQI0 421 aa11.13□□□□□ -0.63
CLCN3-208ENST00000512813 SLC9C2Q5TAH2 1124 aa11.13□□□□□ -0.63
CLCN3-208ENST00000512813 RUFY4Q6ZNE9 571 aa11.13□□□□□ -0.63
CLCN3-208ENST00000512813 OTOP3Q7RTS5 596 aa11.13□□□□□ -0.63
CLCN3-208ENST00000512813 NPAS4Q8IUM7 802 aa11.13□□□□□ -0.63
CLCN3-208ENST00000512813 PJA1Q8NG27 643 aa11.13□□□□□ -0.63
CLCN3-208ENST00000512813 GMCL1Q96IK5 515 aa11.13□□□□□ -0.63
CLCN3-208ENST00000512813 EHMT1Q9H9B1 1298 aa11.13□□□□□ -0.63
CLCN3-208ENST00000512813 TLR7Q9NYK1 1049 aaKnown RBP11.13□□□□□ -0.63
CLCN3-208ENST00000512813 ANKFY1Q9P2R3 1169 aa11.13□□□□□ -0.63
CLCN3-208ENST00000512813 LZTS1Q9Y250 596 aa11.13□□□□□ -0.63
CLCN3-208ENST00000512813 HCFC2Q9Y5Z7 792 aa11.13□□□□□ -0.63
CLCN3-208ENST00000512813 MIA3Q5JRA6 1907 aa11.12□□□□□ -0.63
CLCN3-208ENST00000512813 KIAA1217Q5T5P2 1943 aa11.12□□□□□ -0.63
CLCN3-208ENST00000512813 HIDE1A8MVS5 230 aa11.12□□□□□ -0.63
CLCN3-208ENST00000512813 B4DLN1 442 aa11.12□□□□□ -0.63
CLCN3-208ENST00000512813 TREHO43280 583 aa11.12□□□□□ -0.63
CLCN3-208ENST00000512813 LAMTOR5O43504 91 aa11.12□□□□□ -0.63
CLCN3-208ENST00000512813 GHRP10912 638 aa11.12□□□□□ -0.63
CLCN3-208ENST00000512813 RBM25P49756 843 aaKnown RBP11.12□□□□□ -0.63
CLCN3-208ENST00000512813 MRPL12P52815 198 aaKnown RBP11.12□□□□□ -0.63
CLCN3-208ENST00000512813 SNAP25P60880 206 aa11.12□□□□□ -0.63
CLCN3-208ENST00000512813 RARS2Q5T160 578 aaKnown RBP11.12□□□□□ -0.63
CLCN3-208ENST00000512813 IL31Q6EBC2 164 aa11.12□□□□□ -0.63
CLCN3-208ENST00000512813 RNF207Q6ZRF8 634 aa11.12□□□□□ -0.63
CLCN3-208ENST00000512813 PRR23CQ6ZRP0 262 aa11.12□□□□□ -0.63
CLCN3-208ENST00000512813 LINC01599Q8WXQ3 324 aa11.12□□□□□ -0.63
CLCN3-208ENST00000512813 SSH1Q8WYL5 1049 aa11.12□□□□□ -0.63
CLCN3-208ENST00000512813 CEP95Q96GE4 821 aa11.12□□□□□ -0.63
CLCN3-208ENST00000512813 GPR20Q99678 358 aa11.12□□□□□ -0.63
CLCN3-208ENST00000512813 TCF25Q9BQ70 676 aa11.12□□□□□ -0.63
CLCN3-208ENST00000512813 NGRNQ9NPE2 291 aaKnown RBP11.12□□□□□ -0.63
CLCN3-208ENST00000512813 ARHGEF3Q9NR81 526 aa11.12□□□□□ -0.63
CLCN3-208ENST00000512813 AAASQ9NRG9 546 aa11.12□□□□□ -0.63
CLCN3-208ENST00000512813 TMEM260Q9NX78 707 aa11.12□□□□□ -0.63
CLCN3-208ENST00000512813 MTMR4Q9NYA4 1195 aa11.12□□□□□ -0.63
CLCN3-208ENST00000512813 PRR12Q9ULL5 1215 aa11.12□□□□□ -0.63
CLCN3-208ENST00000512813 ISY1Q9ULR0 285 aaKnown RBP11.12□□□□□ -0.63
CLCN3-208ENST00000512813 PPFIA4O75335 1185 aa11.11□□□□□ -0.63
CLCN3-208ENST00000512813 TTLL1O95922 423 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms