RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 CPP00450 1065 aa13.49□□□□□ -0.25
COL11A1-210ENST00000512756 SERPINB2P05120 415 aa13.49□□□□□ -0.25
COL11A1-210ENST00000512756 BAG6P46379 1132 aa13.49□□□□□ -0.25
COL11A1-210ENST00000512756 ADCY2Q08462 1091 aa13.49□□□□□ -0.25
COL11A1-210ENST00000512756 AP3B2Q13367 1082 aa13.49□□□□□ -0.25
COL11A1-210ENST00000512756 GADL1Q6ZQY3 521 aa13.49□□□□□ -0.25
COL11A1-210ENST00000512756 CLEC17AQ6ZS10 378 aa13.49□□□□□ -0.25
COL11A1-210ENST00000512756 OSBPL5Q9H0X9 879 aaPredicted RBP13.49□□□□□ -0.25
COL11A1-210ENST00000512756 SHROOM2Q13796 1616 aa13.48□□□□□ -0.25
COL11A1-210ENST00000512756 LGALS16A8MUM7 142 aa13.48□□□□□ -0.25
COL11A1-210ENST00000512756 SEMA3FQ13275 785 aa13.48□□□□□ -0.25
COL11A1-210ENST00000512756 SNX1Q13596 522 aa13.48□□□□□ -0.25
COL11A1-210ENST00000512756 SDCCAG3Q96C92 435 aa13.48□□□□□ -0.25
COL11A1-210ENST00000512756 ANO3Q9BYT9 981 aa13.48□□□□□ -0.25
COL11A1-210ENST00000512756 ALDH8A1Q9H2A2 487 aaPredicted RBP13.48□□□□□ -0.25
COL11A1-210ENST00000512756 BAG5Q9UL15 447 aa13.48□□□□□ -0.25
COL11A1-210ENST00000512756 MEIS1O00470 390 aa13.48□□□□□ -0.25
COL11A1-210ENST00000512756 MT-ND3P03897 115 aa13.48□□□□□ -0.25
COL11A1-210ENST00000512756 SCYL3Q8IZE3 742 aa13.48□□□□□ -0.25
COL11A1-210ENST00000512756 PLCD3Q8N3E9 789 aa13.48□□□□□ -0.25
COL11A1-210ENST00000512756 PCIF1Q9H4Z3 704 aa13.48□□□□□ -0.25
COL11A1-210ENST00000512756 NOVA2Q9UNW9 492 aaKnown RBP13.48□□□□□ -0.25
COL11A1-210ENST00000512756 SORBS3O60504 671 aa13.48□□□□□ -0.25
COL11A1-210ENST00000512756 MCAMP43121 646 aa13.48□□□□□ -0.25
COL11A1-210ENST00000512756 CDK8P49336 464 aa13.48□□□□□ -0.25
COL11A1-210ENST00000512756 UBXN2AP68543 259 aa13.48□□□□□ -0.25
COL11A1-210ENST00000512756 TMED2Q15363 201 aa13.48□□□□□ -0.25
COL11A1-210ENST00000512756 FOXP4Q8IVH2 680 aaPredicted RBP13.48□□□□□ -0.25
COL11A1-210ENST00000512756 ZMYND12Q9H0C1 365 aa13.48□□□□□ -0.25
COL11A1-210ENST00000512756 PODXLO00592 558 aa13.48□□□□□ -0.25
COL11A1-210ENST00000512756 TTC4O95801 387 aa13.48□□□□□ -0.25
COL11A1-210ENST00000512756 CCND2P30279 289 aa13.48□□□□□ -0.25
COL11A1-210ENST00000512756 ORC2Q13416 577 aaPredicted RBP13.48□□□□□ -0.25
COL11A1-210ENST00000512756 JADE1Q6IE81 842 aa13.48□□□□□ -0.25
COL11A1-210ENST00000512756 BBS5Q8N3I7 341 aa13.48□□□□□ -0.25
COL11A1-210ENST00000512756 UGGT1Q9NYU2 1555 aa13.48□□□□□ -0.25
COL11A1-210ENST00000512756 CLGNO14967 610 aa13.47□□□□□ -0.25
COL11A1-210ENST00000512756 FAM47CQ5HY64 1035 aa13.47□□□□□ -0.25
COL11A1-210ENST00000512756 RASIP1Q5U651 963 aa13.47□□□□□ -0.25
COL11A1-210ENST00000512756 FMR1NBQ8N0W7 255 aaPredicted RBP13.47□□□□□ -0.25
COL11A1-210ENST00000512756 DYNLL2Q96FJ2 89 aa13.47□□□□□ -0.25
COL11A1-210ENST00000512756 LRGUKQ96M69 825 aa13.47□□□□□ -0.25
COL11A1-210ENST00000512756 THEGQ9P2T0 379 aa13.47□□□□□ -0.25
COL11A1-210ENST00000512756 ADAMTS1Q9UHI8 967 aa13.47□□□□□ -0.25
COL11A1-210ENST00000512756 INO80B-WBP1J3KQ70 363 aa13.47□□□□□ -0.25
COL11A1-210ENST00000512756 KPNA2P52292 529 aaKnown RBP13.47□□□□□ -0.25
COL11A1-210ENST00000512756 RWDD2BP57060 319 aa13.47□□□□□ -0.25
COL11A1-210ENST00000512756 ZKSCAN8Q15776 578 aaPredicted RBP13.47□□□□□ -0.25
COL11A1-210ENST00000512756 RNF169Q8NCN4 708 aa13.47□□□□□ -0.25
COL11A1-210ENST00000512756 TCP11Q8WWU5 503 aa13.47□□□□□ -0.25
COL11A1-210ENST00000512756 TRIM56Q9BRZ2 755 aaKnown RBP13.47□□□□□ -0.25
COL11A1-210ENST00000512756 INO80BQ9C086 356 aaPredicted RBP13.47□□□□□ -0.25
COL11A1-210ENST00000512756 CEP72Q9P209 647 aa13.47□□□□□ -0.25
COL11A1-210ENST00000512756 PPP1R9AQ9ULJ8 1098 aa13.47□□□□□ -0.25
COL11A1-210ENST00000512756 MIF4GDA9UHW6 222 aaKnown RBP13.47□□□□□ -0.25
COL11A1-210ENST00000512756 IPO5O00410 1097 aaKnown RBP13.47□□□□□ -0.25
COL11A1-210ENST00000512756 CCNA1P78396 465 aa13.47□□□□□ -0.25
COL11A1-210ENST00000512756 CLEC4GQ6UXB4 293 aa13.47□□□□□ -0.25
COL11A1-210ENST00000512756 HDAC11Q96DB2 347 aa13.47□□□□□ -0.25
COL11A1-210ENST00000512756 PVALEFA0A1B0GWK0 134 aa13.47□□□□□ -0.25
COL11A1-210ENST00000512756 WDR46O15213 610 aaKnown RBP13.47□□□□□ -0.25
COL11A1-210ENST00000512756 LPXNO60711 386 aa13.47□□□□□ -0.25
COL11A1-210ENST00000512756 PLEKHA8P1O95397 391 aa13.47□□□□□ -0.25
COL11A1-210ENST00000512756 SAT1P21673 171 aa13.47□□□□□ -0.25
COL11A1-210ENST00000512756 ARL4AP40617 200 aa13.47□□□□□ -0.25
COL11A1-210ENST00000512756 ABHD10Q9NUJ1 306 aa13.47□□□□□ -0.25
COL11A1-210ENST00000512756 EPS15L1Q9UBC2 864 aa13.47□□□□□ -0.25
COL11A1-210ENST00000512756 CYP2D7A0A087X1C5 515 aa13.46□□□□□ -0.25
COL11A1-210ENST00000512756 PFKFB3Q16875 520 aaPredicted RBP13.46□□□□□ -0.25
COL11A1-210ENST00000512756 RAB44Q7Z6P3 723 aaPredicted RBP13.46□□□□□ -0.25
COL11A1-210ENST00000512756 SULF1Q8IWU6 871 aa13.46□□□□□ -0.25
COL11A1-210ENST00000512756 RPS6KC1Q96S38 1066 aa13.46□□□□□ -0.25
COL11A1-210ENST00000512756 SCINQ9Y6U3 715 aa13.46□□□□□ -0.25
COL11A1-210ENST00000512756 EXOC1LA0A1B0GW35 172 aa13.46□□□□□ -0.25
COL11A1-210ENST00000512756 USP17L3A6NCW0 530 aa13.46□□□□□ -0.25
COL11A1-210ENST00000512756 USP17L4A6NCW7 530 aa13.46□□□□□ -0.25
COL11A1-210ENST00000512756 TTC36A6NLP5 189 aa13.46□□□□□ -0.25
COL11A1-210ENST00000512756 GOLGA8SH3BPF8 625 aa13.46□□□□□ -0.25
COL11A1-210ENST00000512756 STX1BP61266 288 aa13.46□□□□□ -0.25
COL11A1-210ENST00000512756 USP17L1Q7RTZ2 530 aa13.46□□□□□ -0.25
COL11A1-210ENST00000512756 FAM193BQ96PV7 902 aaPredicted RBP13.46□□□□□ -0.25
COL11A1-210ENST00000512756 MID2Q9UJV3 735 aa13.46□□□□□ -0.25
COL11A1-210ENST00000512756 ZNF233A6NK53 670 aa13.46□□□□□ -0.25
COL11A1-210ENST00000512756 GRAPQ13588 217 aa13.46□□□□□ -0.25
COL11A1-210ENST00000512756 RAPH1Q70E73 1250 aa13.46□□□□□ -0.25
COL11A1-210ENST00000512756 SESTD1Q86VW0 696 aa13.46□□□□□ -0.25
COL11A1-210ENST00000512756 GRAPLQ8TC17 118 aaPredicted RBP13.46□□□□□ -0.25
COL11A1-210ENST00000512756 DCPSQ96C86 337 aaKnown RBP13.46□□□□□ -0.25
COL11A1-210ENST00000512756 DDX27Q96GQ7 796 aaKnown RBP13.46□□□□□ -0.25
COL11A1-210ENST00000512756 NPHP4O75161 1426 aaPredicted RBP13.46□□□□□ -0.26
COL11A1-210ENST00000512756 GDF11O95390 407 aa13.46□□□□□ -0.26
COL11A1-210ENST00000512756 PSAPP07602 524 aa13.46□□□□□ -0.26
COL11A1-210ENST00000512756 ACTN1P12814 892 aa13.46□□□□□ -0.26
COL11A1-210ENST00000512756 DDIT3P35638 169 aa13.46□□□□□ -0.26
COL11A1-210ENST00000512756 IGBP1P78318 339 aa13.46□□□□□ -0.26
COL11A1-210ENST00000512756 UBE2SQ16763 222 aa13.46□□□□□ -0.26
COL11A1-210ENST00000512756 FBXO41Q8TF61 875 aa13.46□□□□□ -0.26
COL11A1-210ENST00000512756 FAM149B1Q96BN6 582 aa13.46□□□□□ -0.26
COL11A1-210ENST00000512756 BCS1LQ9Y276 419 aa13.46□□□□□ -0.26
COL11A1-210ENST00000512756 GDAQ9Y2T3 454 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms