RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 EYA4O95677 639 aa22.12■■□□□ 1.13
HMGCS1-206ENST00000511774 MMP1P03956 469 aa22.12■■□□□ 1.13
HMGCS1-206ENST00000511774 PARP1P09874 1014 aaKnown RBP22.12■■□□□ 1.13
HMGCS1-206ENST00000511774 GHRP10912 638 aa22.12■■□□□ 1.13
HMGCS1-206ENST00000511774 RUFY4Q6ZNE9 571 aa22.12■■□□□ 1.13
HMGCS1-206ENST00000511774 LMBR1Q8WVP7 490 aa22.12■■□□□ 1.13
HMGCS1-206ENST00000511774 APBB2Q92870 758 aa22.12■■□□□ 1.13
HMGCS1-206ENST00000511774 PBXIP1Q96AQ6 731 aa22.12■■□□□ 1.13
HMGCS1-206ENST00000511774 AMNQ9BXJ7 453 aa22.12■■□□□ 1.13
HMGCS1-206ENST00000511774 FAM86C1Q9NVL1 165 aa22.12■■□□□ 1.13
HMGCS1-206ENST00000511774 TGFB3P10600 412 aa22.11■■□□□ 1.13
HMGCS1-206ENST00000511774 PTPN5P54829 565 aa22.11■■□□□ 1.13
HMGCS1-206ENST00000511774 ZSCAN10Q96SZ4 725 aaPredicted RBP22.11■■□□□ 1.13
HMGCS1-206ENST00000511774 RNF41Q9H4P4 317 aaPredicted RBP22.11■■□□□ 1.13
HMGCS1-206ENST00000511774 EHMT1Q9H9B1 1298 aa22.11■■□□□ 1.13
HMGCS1-206ENST00000511774 PLAGL2Q9UPG8 496 aa22.11■■□□□ 1.13
HMGCS1-206ENST00000511774 PLXNA3P51805 1871 aa22.11■■□□□ 1.13
HMGCS1-206ENST00000511774 LOC730098B7Z3J9 87 aa22.1■■□□□ 1.13
HMGCS1-206ENST00000511774 ENPP3O14638 875 aa22.1■■□□□ 1.13
HMGCS1-206ENST00000511774 MRPS9P82933 396 aaKnown RBP22.1■■□□□ 1.13
HMGCS1-206ENST00000511774 ZXDAP98168 799 aa22.1■■□□□ 1.13
HMGCS1-206ENST00000511774 MGAT3Q09327 533 aa22.1■■□□□ 1.13
HMGCS1-206ENST00000511774 LPIN1Q14693 890 aa22.1■■□□□ 1.13
HMGCS1-206ENST00000511774 LINC01599Q8WXQ3 324 aa22.1■■□□□ 1.13
HMGCS1-206ENST00000511774 GPR20Q99678 358 aa22.1■■□□□ 1.13
HMGCS1-206ENST00000511774 PLXNA4Q9HCM2 1894 aa22.1■■□□□ 1.13
HMGCS1-206ENST00000511774 ZSWIM5Q9P217 1185 aa22.1■■□□□ 1.13
HMGCS1-206ENST00000511774 PCDHGC5Q9Y5F6 944 aa22.1■■□□□ 1.13
HMGCS1-206ENST00000511774 VPS13AQ96RL7 3174 aa22.09■■□□□ 1.13
HMGCS1-206ENST00000511774 ST18O60284 1047 aa22.09■■□□□ 1.13
HMGCS1-206ENST00000511774 GLP2RO95838 553 aa22.09■■□□□ 1.13
HMGCS1-206ENST00000511774 CCND2P30279 289 aa22.09■■□□□ 1.13
HMGCS1-206ENST00000511774 VCPP55072 806 aaKnown RBP22.09■■□□□ 1.13
HMGCS1-206ENST00000511774 RRP1P56182 461 aaKnown RBP22.09■■□□□ 1.13
HMGCS1-206ENST00000511774 ARHGAP4P98171 946 aa22.09■■□□□ 1.13
HMGCS1-206ENST00000511774 CYFIP1Q7L576 1253 aa22.09■■□□□ 1.13
HMGCS1-206ENST00000511774 IQCA1Q86XH1 822 aa22.09■■□□□ 1.13
HMGCS1-206ENST00000511774 SMRP1Q8NCR6 262 aa22.09■■□□□ 1.13
HMGCS1-206ENST00000511774 PCDHA1Q9Y5I3 950 aa22.09■■□□□ 1.13
HMGCS1-206ENST00000511774 MRPL42Q9Y6G3 142 aaKnown RBP22.09■■□□□ 1.13
HMGCS1-206ENST00000511774 LOXHD1Q8IVV2 1947 aa22.09■■□□□ 1.13
HMGCS1-206ENST00000511774 WDR87Q6ZQQ6 2873 aa22.08■■□□□ 1.13
HMGCS1-206ENST00000511774 ITGB1P05556 798 aa22.08■■□□□ 1.13
HMGCS1-206ENST00000511774 NDUFV1P49821 464 aa22.08■■□□□ 1.13
HMGCS1-206ENST00000511774 BTG3Q14201 252 aaPredicted RBP22.08■■□□□ 1.13
HMGCS1-206ENST00000511774 CBX2Q14781 532 aaPredicted RBP22.08■■□□□ 1.13
HMGCS1-206ENST00000511774 ANKRD45Q5TZF3 282 aa22.08■■□□□ 1.13
HMGCS1-206ENST00000511774 FCHSD1Q86WN1 690 aa22.08■■□□□ 1.13
HMGCS1-206ENST00000511774 USP26Q9BXU7 913 aa22.08■■□□□ 1.13
HMGCS1-206ENST00000511774 TRIM6-TRIM34B2RNG4 842 aa22.07■■□□□ 1.12
HMGCS1-206ENST00000511774 ZBTB5O15062 677 aa22.07■■□□□ 1.12
HMGCS1-206ENST00000511774 DGKIO75912 1065 aa22.07■■□□□ 1.12
HMGCS1-206ENST00000511774 UTP14CQ5TAP6 766 aaKnown RBP22.07■■□□□ 1.12
HMGCS1-206ENST00000511774 METTL7BQ6UX53 244 aa22.07■■□□□ 1.12
HMGCS1-206ENST00000511774 CRIPAKQ8N1N5 446 aa22.07■■□□□ 1.12
HMGCS1-206ENST00000511774 FBXL6Q8N531 539 aa22.07■■□□□ 1.12
HMGCS1-206ENST00000511774 SPPL3Q8TCT6 385 aa22.07■■□□□ 1.12
HMGCS1-206ENST00000511774 MAP3K20Q9NYL2 800 aaKnown RBP22.07■■□□□ 1.12
HMGCS1-206ENST00000511774 MAD2L2Q9UI95 211 aa22.07■■□□□ 1.12
HMGCS1-206ENST00000511774 BARX2Q9UMQ3 279 aaPredicted RBP22.07■■□□□ 1.12
HMGCS1-206ENST00000511774 RWDD3Q9Y3V2 267 aa22.07■■□□□ 1.12
HMGCS1-206ENST00000511774 FAM186AA6NE01 2351 aa22.06■■□□□ 1.12
HMGCS1-206ENST00000511774 SPATA31C2B4DYI2 1134 aa22.06■■□□□ 1.12
HMGCS1-206ENST00000511774 KLRF2D3W0D1 207 aa22.06■■□□□ 1.12
HMGCS1-206ENST00000511774 NOP56O00567 594 aaKnown RBP22.06■■□□□ 1.12
HMGCS1-206ENST00000511774 ZNF213O14771 459 aa22.06■■□□□ 1.12
HMGCS1-206ENST00000511774 ICAM3P32942 547 aa22.06■■□□□ 1.12
HMGCS1-206ENST00000511774 RBM10P98175 930 aaKnown RBP22.06■■□□□ 1.12
HMGCS1-206ENST00000511774 RTN4RL1Q86UN2 441 aaPredicted RBP22.06■■□□□ 1.12
HMGCS1-206ENST00000511774 EFHBQ8N7U6 833 aa22.06■■□□□ 1.12
HMGCS1-206ENST00000511774 ASIC4Q96FT7 647 aa22.06■■□□□ 1.12
HMGCS1-206ENST00000511774 INPP4AQ96PE3 977 aaPredicted RBP22.06■■□□□ 1.12
HMGCS1-206ENST00000511774 USP15Q9Y4E8 981 aaPredicted RBP22.06■■□□□ 1.12
HMGCS1-206ENST00000511774 FRMPD4Q14CM0 1322 aa22.06■■□□□ 1.12
HMGCS1-206ENST00000511774 DCHS1Q96JQ0 3298 aa22.05■■□□□ 1.12
HMGCS1-206ENST00000511774 GNAT1P11488 350 aa22.05■■□□□ 1.12
HMGCS1-206ENST00000511774 COASYQ13057 564 aa22.05■■□□□ 1.12
HMGCS1-206ENST00000511774 CCDC178Q5BJE1 867 aa22.05■■□□□ 1.12
HMGCS1-206ENST00000511774 ZBTB10Q96DT7 871 aa22.05■■□□□ 1.12
HMGCS1-206ENST00000511774 PLVAPQ9BX97 442 aa22.05■■□□□ 1.12
HMGCS1-206ENST00000511774 AGO3Q9H9G7 860 aaKnown RBP22.05■■□□□ 1.12
HMGCS1-206ENST00000511774 RTEL1Q9NZ71 1219 aa22.05■■□□□ 1.12
HMGCS1-206ENST00000511774 GCOM1H8Y6P7 765 aaPredicted RBP22.04■■□□□ 1.12
HMGCS1-206ENST00000511774 GFRA3O60609 400 aa22.04■■□□□ 1.12
HMGCS1-206ENST00000511774 POLR2MP0CAP2 368 aa22.04■■□□□ 1.12
HMGCS1-206ENST00000511774 NRIP1P48552 1158 aa22.04■■□□□ 1.12
HMGCS1-206ENST00000511774 SP4Q02446 784 aa22.04■■□□□ 1.12
HMGCS1-206ENST00000511774 SEC23AQ15436 765 aa22.04■■□□□ 1.12
HMGCS1-206ENST00000511774 FBXO47Q5MNV8 452 aa22.04■■□□□ 1.12
HMGCS1-206ENST00000511774 RBM23Q86U06 439 aaKnown RBP22.04■■□□□ 1.12
HMGCS1-206ENST00000511774 HOMER1Q86YM7 354 aa22.04■■□□□ 1.12
HMGCS1-206ENST00000511774 SUGP1Q8IWZ8 645 aaKnown RBP22.04■■□□□ 1.12
HMGCS1-206ENST00000511774 KLHL23Q8NBE8 558 aa22.04■■□□□ 1.12
HMGCS1-206ENST00000511774 P2RX5Q93086 422 aa22.04■■□□□ 1.12
HMGCS1-206ENST00000511774 PIGSQ96S52 555 aa22.04■■□□□ 1.12
HMGCS1-206ENST00000511774 PALM3A6NDB9 673 aaPredicted RBP22.03■■□□□ 1.12
HMGCS1-206ENST00000511774 GATMP50440 423 aa22.03■■□□□ 1.12
HMGCS1-206ENST00000511774 VN1R2Q8NFZ6 395 aa22.03■■□□□ 1.12
HMGCS1-206ENST00000511774 CYTH3O43739 400 aa22.02■■□□□ 1.12
HMGCS1-206ENST00000511774 SDSP20132 328 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms