RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 APOBRQ0VD83 1088 aa17.54■□□□□ 0.4
COL1A1-213ENST00000511732 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.54■□□□□ 0.4
COL1A1-213ENST00000511732 LMBR1Q8WVP7 490 aa17.54■□□□□ 0.4
COL1A1-213ENST00000511732 CDHR1Q96JP9 859 aa17.54■□□□□ 0.4
COL1A1-213ENST00000511732 TMEM260Q9NX78 707 aa17.54■□□□□ 0.4
COL1A1-213ENST00000511732 ZNF215Q9UL58 517 aaPredicted RBP17.54■□□□□ 0.4
COL1A1-213ENST00000511732 SPTBN5Q9NRC6 3674 aaKnown RBP17.54■□□□□ 0.4
COL1A1-213ENST00000511732 SIP14410 1827 aa17.54■□□□□ 0.4
COL1A1-213ENST00000511732 COL4A4P53420 1690 aaPredicted RBP17.53■□□□□ 0.4
COL1A1-213ENST00000511732 SMCO2A6NFE2 343 aa17.53■□□□□ 0.4
COL1A1-213ENST00000511732 GJB5O95377 273 aa17.53■□□□□ 0.4
COL1A1-213ENST00000511732 HMGB1P09429 215 aaKnown RBP17.53■□□□□ 0.4
COL1A1-213ENST00000511732 CTSHP09668 335 aa17.53■□□□□ 0.4
COL1A1-213ENST00000511732 CLK2P49760 499 aaKnown RBP17.53■□□□□ 0.4
COL1A1-213ENST00000511732 ARHGAP4P98171 946 aa17.53■□□□□ 0.4
COL1A1-213ENST00000511732 IKBKEQ14164 716 aa17.53■□□□□ 0.4
COL1A1-213ENST00000511732 PLEKHG4Q58EX7 1191 aa17.53■□□□□ 0.4
COL1A1-213ENST00000511732 KRT40Q6A162 431 aa17.53■□□□□ 0.4
COL1A1-213ENST00000511732 PPP1R18Q6NYC8 613 aa17.53■□□□□ 0.4
COL1A1-213ENST00000511732 Q6ZUG5 572 aa17.53■□□□□ 0.4
COL1A1-213ENST00000511732 ARNTL2Q8WYA1 636 aa17.53■□□□□ 0.4
COL1A1-213ENST00000511732 SEPT1Q8WYJ6 367 aa17.53■□□□□ 0.4
COL1A1-213ENST00000511732 JAKMIP1Q96N16 626 aaKnown RBP17.53■□□□□ 0.4
COL1A1-213ENST00000511732 MXRA8Q9BRK3 442 aa17.53■□□□□ 0.4
COL1A1-213ENST00000511732 ANO3Q9BYT9 981 aa17.53■□□□□ 0.4
COL1A1-213ENST00000511732 BARHL2Q9NY43 387 aa17.53■□□□□ 0.4
COL1A1-213ENST00000511732 KAT6AQ92794 2004 aa17.53■□□□□ 0.4
COL1A1-213ENST00000511732 EMSYQ7Z589 1322 aa17.52■□□□□ 0.4
COL1A1-213ENST00000511732 ADAMTS3O15072 1205 aa17.52■□□□□ 0.4
COL1A1-213ENST00000511732 MAFGO15525 162 aa17.52■□□□□ 0.4
COL1A1-213ENST00000511732 ARP10275 920 aa17.52■□□□□ 0.4
COL1A1-213ENST00000511732 GNAT1P11488 350 aa17.52■□□□□ 0.4
COL1A1-213ENST00000511732 MARK3P27448 753 aa17.52■□□□□ 0.4
COL1A1-213ENST00000511732 RCAN1P53805 252 aa17.52■□□□□ 0.4
COL1A1-213ENST00000511732 FAM117BQ6P1L5 589 aa17.52■□□□□ 0.4
COL1A1-213ENST00000511732 BRF1Q92994 677 aa17.52■□□□□ 0.4
COL1A1-213ENST00000511732 PCYT2Q99447 389 aa17.52■□□□□ 0.4
COL1A1-213ENST00000511732 KCNH7Q9NS40 1196 aa17.52■□□□□ 0.4
COL1A1-213ENST00000511732 NAP1L2Q9ULW6 460 aaPredicted RBP17.52■□□□□ 0.4
COL1A1-213ENST00000511732 MTCH2Q9Y6C9 303 aa17.52■□□□□ 0.4
COL1A1-213ENST00000511732 NRCAMQ92823 1304 aa17.51■□□□□ 0.39
COL1A1-213ENST00000511732 hCG_1984214I3L0E3 225 aa17.51■□□□□ 0.39
COL1A1-213ENST00000511732 LPXNO60711 386 aa17.51■□□□□ 0.39
COL1A1-213ENST00000511732 EFCAB14O75071 495 aa17.51■□□□□ 0.39
COL1A1-213ENST00000511732 CAND2O75155 1236 aa17.51■□□□□ 0.39
COL1A1-213ENST00000511732 POU3F3P20264 500 aaPredicted RBP17.51■□□□□ 0.39
COL1A1-213ENST00000511732 METAP2P50579 478 aaKnown RBP eCLIP17.51■□□□□ 0.39
COL1A1-213ENST00000511732 ADCY7P51828 1080 aa17.51■□□□□ 0.39
COL1A1-213ENST00000511732 FGD1P98174 961 aa17.51■□□□□ 0.39
COL1A1-213ENST00000511732 BLOC1S2Q6QNY1 142 aa17.51■□□□□ 0.39
COL1A1-213ENST00000511732 RUFY4Q6ZNE9 571 aa17.51■□□□□ 0.39
COL1A1-213ENST00000511732 MICALL1Q8N3F8 863 aa17.51■□□□□ 0.39
COL1A1-213ENST00000511732 ZNF713Q8N859 430 aaPredicted RBP17.51■□□□□ 0.39
COL1A1-213ENST00000511732 ZBED2Q9BTP6 218 aa17.51■□□□□ 0.39
COL1A1-213ENST00000511732 EHMT1Q9H9B1 1298 aa17.51■□□□□ 0.39
COL1A1-213ENST00000511732 FOSP01100 380 aaPredicted RBP17.5■□□□□ 0.39
COL1A1-213ENST00000511732 RPS6KB1P23443 525 aa17.5■□□□□ 0.39
COL1A1-213ENST00000511732 ITGB3BPQ13352 177 aaPredicted RBP17.5■□□□□ 0.39
COL1A1-213ENST00000511732 PKN1Q16512 942 aa17.5■□□□□ 0.39
COL1A1-213ENST00000511732 PFKFB3Q16875 520 aaPredicted RBP17.5■□□□□ 0.39
COL1A1-213ENST00000511732 TJAP1Q5JTD0 557 aa17.5■□□□□ 0.39
COL1A1-213ENST00000511732 FAM26DQ5JW98 314 aa17.5■□□□□ 0.39
COL1A1-213ENST00000511732 FBXL16Q8N461 479 aa17.5■□□□□ 0.39
COL1A1-213ENST00000511732 RAD9AQ99638 391 aa17.5■□□□□ 0.39
COL1A1-213ENST00000511732 AGXT2Q9BYV1 514 aa17.5■□□□□ 0.39
COL1A1-213ENST00000511732 JPH1Q9HDC5 661 aaPredicted RBP17.5■□□□□ 0.39
COL1A1-213ENST00000511732 ERAP1Q9NZ08 941 aa17.5■□□□□ 0.39
COL1A1-213ENST00000511732 THEGQ9P2T0 379 aa17.5■□□□□ 0.39
COL1A1-213ENST00000511732 NID2Q14112 1375 aa17.5■□□□□ 0.39
COL1A1-213ENST00000511732 REV3LO60673 3130 aa17.49■□□□□ 0.39
COL1A1-213ENST00000511732 LINC01553A4QN01 128 aa17.49■□□□□ 0.39
COL1A1-213ENST00000511732 CHRNA1P02708 482 aa17.49■□□□□ 0.39
COL1A1-213ENST00000511732 SREBF1P36956 1147 aa17.49■□□□□ 0.39
COL1A1-213ENST00000511732 PPFIA1Q13136 1202 aa17.49■□□□□ 0.39
COL1A1-213ENST00000511732 GRB10Q13322 594 aa17.49■□□□□ 0.39
COL1A1-213ENST00000511732 GRIK4Q16099 956 aa17.49■□□□□ 0.39
COL1A1-213ENST00000511732 CEP55Q53EZ4 464 aa17.49■□□□□ 0.39
COL1A1-213ENST00000511732 MARCH8Q5T0T0 291 aa17.49■□□□□ 0.39
COL1A1-213ENST00000511732 JAKMIP3Q5VZ66 844 aa17.49■□□□□ 0.39
COL1A1-213ENST00000511732 TEX2Q8IWB9 1127 aa17.49■□□□□ 0.39
COL1A1-213ENST00000511732 ATXN2LQ8WWM7 1075 aaKnown RBP17.49■□□□□ 0.39
COL1A1-213ENST00000511732 GLG1Q92896 1179 aa17.49■□□□□ 0.39
COL1A1-213ENST00000511732 ZBTB10Q96DT7 871 aa17.49■□□□□ 0.39
COL1A1-213ENST00000511732 SMARCAD1Q9H4L7 1026 aa17.49■□□□□ 0.39
COL1A1-213ENST00000511732 AGO4Q9HCK5 861 aaKnown RBP17.49■□□□□ 0.39
COL1A1-213ENST00000511732 SLC9A2Q9UBY0 812 aa17.49■□□□□ 0.39
COL1A1-213ENST00000511732 NFASCO94856 1347 aa17.48■□□□□ 0.39
COL1A1-213ENST00000511732 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.48■□□□□ 0.39
COL1A1-213ENST00000511732 MEIS1O00470 390 aa17.48■□□□□ 0.39
COL1A1-213ENST00000511732 PPFIA3O75145 1194 aa17.48■□□□□ 0.39
COL1A1-213ENST00000511732 SCG2P13521 617 aa17.48■□□□□ 0.39
COL1A1-213ENST00000511732 MGAT3Q09327 533 aa17.48■□□□□ 0.39
COL1A1-213ENST00000511732 AP3B2Q13367 1082 aa17.48■□□□□ 0.39
COL1A1-213ENST00000511732 NTRK3Q16288 839 aa17.48■□□□□ 0.39
COL1A1-213ENST00000511732 RPAINQ86UA6 219 aa17.48■□□□□ 0.39
COL1A1-213ENST00000511732 MYOCDQ8IZQ8 938 aa17.48■□□□□ 0.39
COL1A1-213ENST00000511732 CRYGNQ8WXF5 182 aa17.48■□□□□ 0.39
COL1A1-213ENST00000511732 SEPT8Q92599 483 aa17.48■□□□□ 0.39
COL1A1-213ENST00000511732 SYMPKQ92797 1274 aaKnown RBP17.48■□□□□ 0.39
COL1A1-213ENST00000511732 PHKBQ93100 1093 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms