RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 DDX39AO00148 427 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 MSH4O15457 936 aa8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 DHX15O43143 795 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 ATG7O95352 703 aa8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 TDP2O95551 362 aa8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 TIMP1P01033 207 aa8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 RAG1P15918 1043 aa8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 KRT76Q01546 638 aa8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 CUL4AQ13619 759 aa8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 GNL2Q13823 731 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 EARS2Q5JPH6 523 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 ZNF746Q6NUN9 644 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 PPP1R13LQ8WUF5 828 aa8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 GLG1Q92896 1179 aa8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 MBOAT7Q96N66 472 aa8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 UIMC1Q96RL1 719 aa8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 RIT2Q99578 217 aa8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 FOXP1Q9H334 677 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 SMARCAD1Q9H4L7 1026 aa8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 AZI2Q9H6S1 392 aa8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 TRMT13Q9NUP7 481 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 ERAP1Q9NZ08 941 aa8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 HDAC6Q9UBN7 1215 aa8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 DDX25Q9UHL0 483 aaKnown RBP8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 GTF2IRD1Q9UHL9 959 aa8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 TBX21Q9UL17 535 aa8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 SMC3Q9UQE7 1217 aa8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 NOD1Q9Y239 953 aa8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 TNRC18O15417 2968 aaPredicted RBP8.1□□□□□ -1.11
PDLIM5-215ENST00000511586 ALPK3Q96L96 1907 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 EMSYQ7Z589 1322 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 SLC37A4O43826 429 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 MARCH6O60337 910 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 CCNT1O60563 726 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 GAS7O60861 476 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 LGR5O75473 907 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 CCNE2O96020 404 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 GNAT1P11488 350 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 GJB2P29033 226 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 BMP8BP34820 402 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 MAGEA10P43363 369 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 SLC26A2P50443 739 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 STAT5BP51692 787 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 MDM2Q00987 491 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 PTGISQ16647 500 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 LRCH2Q5VUJ6 765 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 FAM160B1Q5W0V3 765 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 GDF6Q6KF10 455 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 MIS18BP1Q6P0N0 1132 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 ABHD15Q6UXT9 468 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 CHRDL2Q6WN34 429 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 PLPPR4Q7Z2D5 763 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 TRIM50Q86XT4 487 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 SMAP1Q8IYB5 467 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 SLC5A5Q92911 643 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 BADQ92934 168 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 TNPO1Q92973 898 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 SNX21Q969T3 373 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 FAM20AQ96MK3 541 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 IPO9Q96P70 1041 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 GDF15Q99988 308 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 TEKT3Q9BXF9 490 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 HIPK3Q9H422 1215 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 RNPEPQ9H4A4 650 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 DAXXQ9UER7 740 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 PCDHA10Q9Y5I2 948 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 MYH7BA7E2Y1 1941 aa8.09□□□□□ -1.11
PDLIM5-215ENST00000511586 SCN10AQ9Y5Y9 1956 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 IGKV6D-21A0A0A0MT36 114 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 C17orf102A2RUQ5 167 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 FAM205CA6NFA0 338 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 WDR64B1ANS9 1081 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 H3BQV1 296 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 K7ELQ4 463 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 BACH1O14867 736 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 TBX3O15119 743 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 PSMD10O75832 226 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 BAG4O95429 457 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 PSAPP07602 524 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 SMIM10L2AP0DMW4 78 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 SMIM10L2BP0DMW5 78 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 CYP2C9P11712 490 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 ITGB8P26012 769 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 U2AF2P26368 475 aaKnown RBP eCLIP8.08□□□□□ -1.127e-13■■■■□ 20.7
PDLIM5-215ENST00000511586 MARK3P27448 753 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 SFNP31947 248 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 BFSP2Q13515 415 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 MFSD5Q6N075 450 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 SWSAP1Q6NVH7 229 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 PDXDC2PQ6P474 469 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 NOSTRINQ8IVI9 506 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 TMEM199Q8N511 208 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 RETREG2Q8NC44 543 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 ETNPPLQ8TBG4 499 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 AFAP1L1Q8TED9 768 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 INTS4Q96HW7 963 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 PCYT2Q99447 389 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 PPP1R12CQ9BZL4 782 aa8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 UBE2OQ9C0C9 1292 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-215ENST00000511586 KCNMB3Q9NPA1 279 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms