RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 GPNMBQ14956 572 aa13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 NPY5RQ15761 445 aa13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 OTOP2Q7RTS6 562 aa13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 AFAP1L1Q8TED9 768 aa13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 JPH1Q9HDC5 661 aaPredicted RBP13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 CXXC1Q9P0U4 656 aaPredicted RBP13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 SLC9A2Q9UBY0 812 aa13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 ZNF215Q9UL58 517 aaPredicted RBP13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 C17orf102A2RUQ5 167 aa13.23□□□□□ -0.29
SH3RF1-205ENST00000511421 LGR5O75473 907 aa13.23□□□□□ -0.29
SH3RF1-205ENST00000511421 CTDNEP1O95476 244 aa13.23□□□□□ -0.29
SH3RF1-205ENST00000511421 PFKMP08237 780 aa13.23□□□□□ -0.29
SH3RF1-205ENST00000511421 CKBP12277 381 aa13.23□□□□□ -0.29
SH3RF1-205ENST00000511421 SELPP16109 830 aa13.23□□□□□ -0.29
SH3RF1-205ENST00000511421 CIITAP33076 1130 aa13.23□□□□□ -0.29
SH3RF1-205ENST00000511421 NEK4P51957 841 aa13.23□□□□□ -0.29
SH3RF1-205ENST00000511421 ADAM17P78536 824 aa13.23□□□□□ -0.29
SH3RF1-205ENST00000511421 ME3Q16798 604 aa13.23□□□□□ -0.29
SH3RF1-205ENST00000511421 TRAF7Q6Q0C0 670 aa13.23□□□□□ -0.29
SH3RF1-205ENST00000511421 DEFB128Q7Z7B8 93 aa13.23□□□□□ -0.29
SH3RF1-205ENST00000511421 SERINC5Q86VE9 423 aa13.23□□□□□ -0.29
SH3RF1-205ENST00000511421 PLA2G4DQ86XP0 818 aa13.23□□□□□ -0.29
SH3RF1-205ENST00000511421 CCDC155Q8N6L0 562 aa13.23□□□□□ -0.29
SH3RF1-205ENST00000511421 PCYT2Q99447 389 aa13.23□□□□□ -0.29
SH3RF1-205ENST00000511421 MTMR10Q9NXD2 777 aa13.23□□□□□ -0.29
SH3RF1-205ENST00000511421 PCDHA4Q9UN74 947 aa13.23□□□□□ -0.29
SH3RF1-205ENST00000511421 TRIP12Q14669 1992 aaPredicted RBP13.22□□□□□ -0.29
SH3RF1-205ENST00000511421 M0R2N6 131 aa13.22□□□□□ -0.29
SH3RF1-205ENST00000511421 DHX15O43143 795 aaKnown RBP13.22□□□□□ -0.29
SH3RF1-205ENST00000511421 TREHO43280 583 aa13.22□□□□□ -0.29
SH3RF1-205ENST00000511421 DTNBO60941 627 aa13.22□□□□□ -0.29
SH3RF1-205ENST00000511421 CDKL5O76039 1030 aa13.22□□□□□ -0.29
SH3RF1-205ENST00000511421 LARGE1O95461 756 aa13.22□□□□□ -0.29
SH3RF1-205ENST00000511421 LRRC8DQ7L1W4 858 aa13.22□□□□□ -0.29
SH3RF1-205ENST00000511421 FAM177A1Q8N128 213 aaPredicted RBP13.22□□□□□ -0.29
SH3RF1-205ENST00000511421 DAGLBQ8NCG7 672 aa13.22□□□□□ -0.29
SH3RF1-205ENST00000511421 ATP6V0A1Q93050 837 aa13.22□□□□□ -0.29
SH3RF1-205ENST00000511421 SDF4Q9BRK5 362 aa13.22□□□□□ -0.29
SH3RF1-205ENST00000511421 SETD4Q9NVD3 440 aa13.22□□□□□ -0.29
SH3RF1-205ENST00000511421 STK36Q9NRP7 1315 aa13.22□□□□□ -0.29
SH3RF1-205ENST00000511421 TET1Q8NFU7 2136 aa13.22□□□□□ -0.29
SH3RF1-205ENST00000511421 GRXCR1A8MXD5 290 aa13.21□□□□□ -0.29
SH3RF1-205ENST00000511421 ATG7O95352 703 aa13.21□□□□□ -0.29
SH3RF1-205ENST00000511421 ACTR2P61160 394 aa13.21□□□□□ -0.29
SH3RF1-205ENST00000511421 ZNF618Q5T7W0 954 aa13.21□□□□□ -0.29
SH3RF1-205ENST00000511421 NECAB1Q8N987 351 aa13.21□□□□□ -0.29
SH3RF1-205ENST00000511421 LENG9Q96B70 501 aa13.21□□□□□ -0.29
SH3RF1-205ENST00000511421 SMARCAD1Q9H4L7 1026 aa13.21□□□□□ -0.29
SH3RF1-205ENST00000511421 ERAP1Q9NZ08 941 aa13.21□□□□□ -0.29
SH3RF1-205ENST00000511421 EMSYQ7Z589 1322 aa13.21□□□□□ -0.29
SH3RF1-205ENST00000511421 SCN5AQ14524 2016 aa13.21□□□□□ -0.29
SH3RF1-205ENST00000511421 NBNO60934 754 aa13.21□□□□□ -0.3
SH3RF1-205ENST00000511421 CCNE2O96020 404 aa13.21□□□□□ -0.3
SH3RF1-205ENST00000511421 CXCL10P02778 98 aa13.21□□□□□ -0.3
SH3RF1-205ENST00000511421 FDPSP14324 419 aaKnown RBP13.21□□□□□ -0.3
SH3RF1-205ENST00000511421 USP11P51784 963 aa13.21□□□□□ -0.3
SH3RF1-205ENST00000511421 MBTPS1Q14703 1052 aa13.21□□□□□ -0.3
SH3RF1-205ENST00000511421 GALNT17Q6IS24 598 aa13.21□□□□□ -0.3
SH3RF1-205ENST00000511421 BLIDQ8IZY5 108 aa13.21□□□□□ -0.3
SH3RF1-205ENST00000511421 LMBR1Q8WVP7 490 aa13.21□□□□□ -0.3
SH3RF1-205ENST00000511421 GLG1Q92896 1179 aa13.21□□□□□ -0.3
SH3RF1-205ENST00000511421 GTF3C6Q969F1 213 aa13.21□□□□□ -0.3
SH3RF1-205ENST00000511421 KIF2CQ99661 725 aa13.21□□□□□ -0.3
SH3RF1-205ENST00000511421 MTIF3Q9H2K0 278 aaKnown RBP13.21□□□□□ -0.3
SH3RF1-205ENST00000511421 TTYH1Q9H313 450 aaPredicted RBP13.21□□□□□ -0.3
SH3RF1-205ENST00000511421 KCNJ14Q9UNX9 436 aa13.21□□□□□ -0.3
SH3RF1-205ENST00000511421 IGKV6D-21A0A0A0MT36 114 aa13.2□□□□□ -0.3
SH3RF1-205ENST00000511421 RBAK-RBAKDNI3L0D1 243 aa13.2□□□□□ -0.3
SH3RF1-205ENST00000511421 IPO5O00410 1097 aaKnown RBP13.2□□□□□ -0.3
SH3RF1-205ENST00000511421 PARNO95453 639 aaKnown RBP13.2□□□□□ -0.3
SH3RF1-205ENST00000511421 GNAT1P11488 350 aa13.2□□□□□ -0.3
SH3RF1-205ENST00000511421 MARK3P27448 753 aa13.2□□□□□ -0.3
SH3RF1-205ENST00000511421 SETQ01105 290 aaPredicted RBP13.2□□□□□ -0.3
SH3RF1-205ENST00000511421 PRR16Q569H4 304 aa13.2□□□□□ -0.3
SH3RF1-205ENST00000511421 ZNF697Q5TEC3 545 aa13.2□□□□□ -0.3
SH3RF1-205ENST00000511421 TBCKQ8TEA7 893 aa13.2□□□□□ -0.3
SH3RF1-205ENST00000511421 NRCAMQ92823 1304 aa13.2□□□□□ -0.3
SH3RF1-205ENST00000511421 GUCD1Q96NT3 240 aa13.2□□□□□ -0.3
SH3RF1-205ENST00000511421 UIMC1Q96RL1 719 aa13.2□□□□□ -0.3
SH3RF1-205ENST00000511421 PHF20Q9BVI0 1012 aa13.2□□□□□ -0.3
SH3RF1-205ENST00000511421 PBX4Q9BYU1 374 aa13.2□□□□□ -0.3
SH3RF1-205ENST00000511421 SEMA6BQ9H3T3 888 aa13.2□□□□□ -0.3
SH3RF1-205ENST00000511421 ORC3Q9UBD5 711 aaPredicted RBP13.2□□□□□ -0.3
SH3RF1-205ENST00000511421 TANC1Q9C0D5 1861 aa13.19□□□□□ -0.3
SH3RF1-205ENST00000511421 DDX39AO00148 427 aaKnown RBP13.19□□□□□ -0.3
SH3RF1-205ENST00000511421 DNAJB2P25686 324 aa13.19□□□□□ -0.3
SH3RF1-205ENST00000511421 THPOP40225 353 aa13.19□□□□□ -0.3
SH3RF1-205ENST00000511421 PBX2P40425 430 aa13.19□□□□□ -0.3
SH3RF1-205ENST00000511421 ST3GAL1Q11201 340 aa13.19□□□□□ -0.3
SH3RF1-205ENST00000511421 PPFIA1Q13136 1202 aa13.19□□□□□ -0.3
SH3RF1-205ENST00000511421 ABHD15Q6UXT9 468 aa13.19□□□□□ -0.3
SH3RF1-205ENST00000511421 PLPPR4Q7Z2D5 763 aa13.19□□□□□ -0.3
SH3RF1-205ENST00000511421 FAM161BQ96MY7 647 aa13.19□□□□□ -0.3
SH3RF1-205ENST00000511421 ZNF577Q9BSK1 485 aa13.19□□□□□ -0.3
SH3RF1-205ENST00000511421 C22orf23Q9BZE7 217 aa13.19□□□□□ -0.3
SH3RF1-205ENST00000511421 FTOQ9C0B1 505 aaKnown RBP eCLIP13.19□□□□□ -0.3
SH3RF1-205ENST00000511421 GJB4Q9NTQ9 266 aa13.19□□□□□ -0.3
SH3RF1-205ENST00000511421 TBC1D22BQ9NU19 505 aa13.19□□□□□ -0.3
SH3RF1-205ENST00000511421 SLC4A7Q9Y6M7 1214 aa13.19□□□□□ -0.3
SH3RF1-205ENST00000511421 TMEM265A0A087WTH1 108 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms