RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 GSTTP1A0A1W2PQM5 241 aa26.24■■□□□ 1.79
SNF8-209ENST00000510558 ESYT2A0FGR8 921 aa26.24■■□□□ 1.79
SNF8-209ENST00000510558 PRPF3O43395 683 aaKnown RBP26.24■■□□□ 1.79
SNF8-209ENST00000510558 THPOP40225 353 aa26.24■■□□□ 1.79
SNF8-209ENST00000510558 EVCP57679 992 aa26.24■■□□□ 1.79
SNF8-209ENST00000510558 MBTPS1Q14703 1052 aa26.24■■□□□ 1.79
SNF8-209ENST00000510558 PKN1Q16512 942 aa26.24■■□□□ 1.79
SNF8-209ENST00000510558 PHKBQ93100 1093 aa26.24■■□□□ 1.79
SNF8-209ENST00000510558 PRDM12Q9H4Q4 367 aa26.24■■□□□ 1.79
SNF8-209ENST00000510558 PDIA3P30101 505 aaKnown RBP26.23■■□□□ 1.79
SNF8-209ENST00000510558 KCNJ6P48051 423 aa26.23■■□□□ 1.79
SNF8-209ENST00000510558 TOB2Q14106 344 aaPredicted RBP26.23■■□□□ 1.79
SNF8-209ENST00000510558 NTRK3Q16288 839 aa26.23■■□□□ 1.79
SNF8-209ENST00000510558 CEP55Q53EZ4 464 aa26.23■■□□□ 1.79
SNF8-209ENST00000510558 JAKMIP3Q5VZ66 844 aa26.23■■□□□ 1.79
SNF8-209ENST00000510558 PPP2R2DQ66LE6 453 aa26.23■■□□□ 1.79
SNF8-209ENST00000510558 GAS2L1Q99501 681 aaPredicted RBP26.23■■□□□ 1.79
SNF8-209ENST00000510558 JPH1Q9HDC5 661 aaPredicted RBP26.23■■□□□ 1.79
SNF8-209ENST00000510558 CYP46A1Q9Y6A2 500 aa26.23■■□□□ 1.79
SNF8-209ENST00000510558 RSPH10B2B2RC85 870 aa26.22■■□□□ 1.79
SNF8-209ENST00000510558 RSPH10BP0C881 870 aa26.22■■□□□ 1.79
SNF8-209ENST00000510558 WDR5P61964 334 aaKnown RBP26.22■■□□□ 1.79
SNF8-209ENST00000510558 CCT2P78371 535 aaKnown RBP26.22■■□□□ 1.79
SNF8-209ENST00000510558 ADAM17P78536 824 aa26.22■■□□□ 1.79
SNF8-209ENST00000510558 ARHGAP4P98171 946 aa26.22■■□□□ 1.79
SNF8-209ENST00000510558 AKAP17AQ02040 695 aaKnown RBP26.22■■□□□ 1.79
SNF8-209ENST00000510558 TCTN1Q2MV58 587 aa26.22■■□□□ 1.79
SNF8-209ENST00000510558 HERC6Q8IVU3 1022 aa26.22■■□□□ 1.79
SNF8-209ENST00000510558 CCDC12Q8WUD4 166 aaPredicted RBP26.22■■□□□ 1.79
SNF8-209ENST00000510558 LMBR1Q8WVP7 490 aa26.22■■□□□ 1.79
SNF8-209ENST00000510558 RNF26Q9BY78 433 aaPredicted RBP26.22■■□□□ 1.79
SNF8-209ENST00000510558 TM6SF1Q9BZW5 370 aa26.22■■□□□ 1.79
SNF8-209ENST00000510558 ZMYND12Q9H0C1 365 aa26.22■■□□□ 1.79
SNF8-209ENST00000510558 NFASCO94856 1347 aa26.21■■□□□ 1.79
SNF8-209ENST00000510558 EMSYQ7Z589 1322 aa26.21■■□□□ 1.79
SNF8-209ENST00000510558 ARP10275 920 aa26.21■■□□□ 1.79
SNF8-209ENST00000510558 IFNAR1P17181 557 aa26.21■■□□□ 1.79
SNF8-209ENST00000510558 SLC26A6Q9BXS9 759 aa26.21■■□□□ 1.79
SNF8-209ENST00000510558 NCOA5Q9HCD5 579 aaKnown RBP26.21■■□□□ 1.79
SNF8-209ENST00000510558 C6orf50Q9HD87 102 aa26.21■■□□□ 1.79
SNF8-209ENST00000510558 ERAP1Q9NZ08 941 aa26.21■■□□□ 1.79
SNF8-209ENST00000510558 SLC9A2Q9UBY0 812 aa26.21■■□□□ 1.79
SNF8-209ENST00000510558 MICAL3Q7RTP6 2002 aa26.21■■□□□ 1.79
SNF8-209ENST00000510558 CHD9Q3L8U1 2897 aa26.21■■□□□ 1.79
SNF8-209ENST00000510558 NRCAMQ92823 1304 aa26.2■■□□□ 1.79
SNF8-209ENST00000510558 ABHD14A-ACY1A0A1B0GW23 586 aa26.2■■□□□ 1.78
SNF8-209ENST00000510558 RBAK-RBAKDNI3L0D1 243 aa26.2■■□□□ 1.78
SNF8-209ENST00000510558 MEIS1O00470 390 aa26.2■■□□□ 1.78
SNF8-209ENST00000510558 ADAMTS3O15072 1205 aa26.2■■□□□ 1.78
SNF8-209ENST00000510558 PPFIA3O75145 1194 aa26.2■■□□□ 1.78
SNF8-209ENST00000510558 CAND2O75155 1236 aa26.2■■□□□ 1.78
SNF8-209ENST00000510558 LGR5O75473 907 aa26.2■■□□□ 1.78
SNF8-209ENST00000510558 CA3P07451 260 aa26.2■■□□□ 1.78
SNF8-209ENST00000510558 MARK3P27448 753 aa26.2■■□□□ 1.78
SNF8-209ENST00000510558 ZNF76P36508 570 aa26.2■■□□□ 1.78
SNF8-209ENST00000510558 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.2■■□□□ 1.78
SNF8-209ENST00000510558 GLG1Q92896 1179 aa26.2■■□□□ 1.78
SNF8-209ENST00000510558 SDF4Q9BRK5 362 aa26.2■■□□□ 1.78
SNF8-209ENST00000510558 UPF3BQ9BZI7 483 aaKnown RBP26.2■■□□□ 1.78
SNF8-209ENST00000510558 SMARCAD1Q9H4L7 1026 aa26.2■■□□□ 1.78
SNF8-209ENST00000510558 AGO4Q9HCK5 861 aaKnown RBP26.2■■□□□ 1.78
SNF8-209ENST00000510558 NIPA1Q7RTP0 329 aa26.19■■□□□ 1.78
SNF8-209ENST00000510558 REXO1Q8N1G1 1221 aaKnown RBP26.19■■□□□ 1.78
SNF8-209ENST00000510558 KIF28PB7ZC32 967 aa26.18■■□□□ 1.78
SNF8-209ENST00000510558 EFCAB14O75071 495 aa26.18■■□□□ 1.78
SNF8-209ENST00000510558 CTSHP09668 335 aa26.18■■□□□ 1.78
SNF8-209ENST00000510558 GNA11P29992 359 aa26.18■■□□□ 1.78
SNF8-209ENST00000510558 DEFB103AP81534 67 aa26.18■■□□□ 1.78
SNF8-209ENST00000510558 PPFIA1Q13136 1202 aa26.18■■□□□ 1.78
SNF8-209ENST00000510558 ITGB3BPQ13352 177 aaPredicted RBP26.18■■□□□ 1.78
SNF8-209ENST00000510558 IKBKEQ14164 716 aa26.18■■□□□ 1.78
SNF8-209ENST00000510558 MCTP2Q6DN12 878 aa26.18■■□□□ 1.78
SNF8-209ENST00000510558 PCYT2Q99447 389 aa26.18■■□□□ 1.78
SNF8-209ENST00000510558 ACTR2P61160 394 aa26.17■■□□□ 1.78
SNF8-209ENST00000510558 ADGRE1Q14246 886 aa26.17■■□□□ 1.78
SNF8-209ENST00000510558 CCDC148Q8NFR7 591 aa26.17■■□□□ 1.78
SNF8-209ENST00000510558 CRYGNQ8WXF5 182 aa26.17■■□□□ 1.78
SNF8-209ENST00000510558 EYSQ5T1H1 3165 aa26.17■■□□□ 1.78
SNF8-209ENST00000510558 SIP14410 1827 aa26.16■■□□□ 1.78
SNF8-209ENST00000510558 FAM86B1E9PN63 330 aa26.16■■□□□ 1.78
SNF8-209ENST00000510558 TLL1O43897 1013 aa26.16■■□□□ 1.78
SNF8-209ENST00000510558 CYP3A4P08684 503 aa26.16■■□□□ 1.78
SNF8-209ENST00000510558 FAM86B2P0C5J1 330 aa26.16■■□□□ 1.78
SNF8-209ENST00000510558 GRIK4Q16099 956 aa26.16■■□□□ 1.78
SNF8-209ENST00000510558 TMCO2Q7Z6W1 182 aaPredicted RBP26.16■■□□□ 1.78
SNF8-209ENST00000510558 PLA2G4DQ86XP0 818 aa26.16■■□□□ 1.78
SNF8-209ENST00000510558 DBF4BQ8NFT6 615 aa26.16■■□□□ 1.78
SNF8-209ENST00000510558 ZNF274Q96GC6 653 aaPredicted RBP26.16■■□□□ 1.78
SNF8-209ENST00000510558 LARP6Q9BRS8 491 aaKnown RBP26.16■■□□□ 1.78
SNF8-209ENST00000510558 AZI2Q9H6S1 392 aa26.16■■□□□ 1.78
SNF8-209ENST00000510558 VPS54Q9P1Q0 977 aa26.16■■□□□ 1.78
SNF8-209ENST00000510558 PLEKHG4Q58EX7 1191 aa26.15■■□□□ 1.78
SNF8-209ENST00000510558 RUFY4Q6ZNE9 571 aa26.15■■□□□ 1.78
SNF8-209ENST00000510558 USP38Q8NB14 1042 aa26.15■■□□□ 1.78
SNF8-209ENST00000510558 BICD2Q8TD16 824 aa26.15■■□□□ 1.78
SNF8-209ENST00000510558 RASGRP4Q8TDF6 673 aa26.15■■□□□ 1.78
SNF8-209ENST00000510558 PDRG1Q9NUG6 133 aa26.15■■□□□ 1.78
SNF8-209ENST00000510558 TUBE1Q9UJT0 475 aa26.15■■□□□ 1.78
SNF8-209ENST00000510558 IGLV3-22A0A075B6J6 115 aa26.14■■□□□ 1.78
SNF8-209ENST00000510558 ARHGEF15O94989 841 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms