RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, human

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX41-211	ENST00000510171	RSPH3	Q86UC2	560 aa		12.01	□□□□□ -0.49
DDX41-211	ENST00000510171	NLRX1	Q86UT6	975 aa		12.01	□□□□□ -0.49
DDX41-211	ENST00000510171	ALYREF	Q86V81	257 aa	Known RBP	12.01	□□□□□ -0.49
DDX41-211	ENST00000510171	ADHFE1	Q8IWW8	467 aa		12.01	□□□□□ -0.49
DDX41-211	ENST00000510171	GIMAP8	Q8ND71	665 aa	Predicted RBP	12.01	□□□□□ -0.49
DDX41-211	ENST00000510171	SMARCC2	Q8TAQ2	1214 aa		12.01	□□□□□ -0.49
DDX41-211	ENST00000510171	CUL5	Q93034	780 aa		12.01	□□□□□ -0.49
DDX41-211	ENST00000510171	C11orf84	Q9BUA3	381 aa	Predicted RBP	12.01	□□□□□ -0.49
DDX41-211	ENST00000510171	LMAN2L	Q9H0V9	348 aa		12.01	□□□□□ -0.49
DDX41-211	ENST00000510171	IL25	Q9H293	177 aa		12.01	□□□□□ -0.49
DDX41-211	ENST00000510171	SENP2	Q9HC62	589 aa		12.01	□□□□□ -0.49
DDX41-211	ENST00000510171	RWDD3	Q9Y3V2	267 aa		12.01	□□□□□ -0.49
DDX41-211	ENST00000510171	TELO2	Q9Y4R8	837 aa		12.01	□□□□□ -0.49
DDX41-211	ENST00000510171	FRMPD4	Q14CM0	1322 aa		12.01	□□□□□ -0.49
DDX41-211	ENST00000510171	TRANK1	O15050	2925 aa		12	□□□□□ -0.49
DDX41-211	ENST00000510171	C19orf67	A6NJJ6	358 aa		12	□□□□□ -0.49
DDX41-211	ENST00000510171	ENPP3	O14638	875 aa		12	□□□□□ -0.49
DDX41-211	ENST00000510171	CYP21A2	P08686	494 aa		12	□□□□□ -0.49
DDX41-211	ENST00000510171	GHR	P10912	638 aa		12	□□□□□ -0.49
DDX41-211	ENST00000510171	CTC1	Q2NKJ3	1217 aa		12	□□□□□ -0.49
DDX41-211	ENST00000510171	PCNX4	Q63HM2	1172 aa		12	□□□□□ -0.49
DDX41-211	ENST00000510171	RALYL	Q86SE5	291 aa	Known RBP	12	□□□□□ -0.49
DDX41-211	ENST00000510171	SEPT1	Q8WYJ6	367 aa		12	□□□□□ -0.49
DDX41-211	ENST00000510171	EHMT1	Q9H9B1	1298 aa		12	□□□□□ -0.49
DDX41-211	ENST00000510171	TRIP12	Q14669	1992 aa	Predicted RBP	11.99	□□□□□ -0.49
DDX41-211	ENST00000510171	GRM6	O15303	877 aa		11.99	□□□□□ -0.49
DDX41-211	ENST00000510171	TCF7	P36402	384 aa	Predicted RBP	11.99	□□□□□ -0.49
DDX41-211	ENST00000510171	LTBR	P36941	435 aa		11.99	□□□□□ -0.49
DDX41-211	ENST00000510171	MGAT3	Q09327	533 aa		11.99	□□□□□ -0.49
DDX41-211	ENST00000510171	HYAL1	Q12794	435 aa		11.99	□□□□□ -0.49
DDX41-211	ENST00000510171	BTG3	Q14201	252 aa	Predicted RBP	11.99	□□□□□ -0.49
DDX41-211	ENST00000510171	LPIN1	Q14693	890 aa		11.99	□□□□□ -0.49
DDX41-211	ENST00000510171	USP17L6P	Q6QN14	398 aa		11.99	□□□□□ -0.49
DDX41-211	ENST00000510171	RUFY4	Q6ZNE9	571 aa		11.99	□□□□□ -0.49
DDX41-211	ENST00000510171	NCOA7	Q8NI08	942 aa		11.99	□□□□□ -0.49
DDX41-211	ENST00000510171	RUFY2	Q8WXA3	655 aa		11.99	□□□□□ -0.49
DDX41-211	ENST00000510171	CLP1	Q92989	425 aa	Known RBP	11.99	□□□□□ -0.49
DDX41-211	ENST00000510171	RRP36	Q96EU6	259 aa	Known RBP	11.99	□□□□□ -0.49
DDX41-211	ENST00000510171	CDHR1	Q96JP9	859 aa		11.99	□□□□□ -0.49
DDX41-211	ENST00000510171	POP1	Q99575	1024 aa	Known RBP	11.99	□□□□□ -0.49
DDX41-211	ENST00000510171	KCNH6	Q9H252	994 aa		11.99	□□□□□ -0.49
DDX41-211	ENST00000510171	ERAP1	Q9NZ08	941 aa		11.99	□□□□□ -0.49
DDX41-211	ENST00000510171	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.99	□□□□□ -0.49
DDX41-211	ENST00000510171	COL4A4	P53420	1690 aa	Predicted RBP	11.98	□□□□□ -0.49
DDX41-211	ENST00000510171	ADGRA3	Q8IWK6	1321 aa		11.98	□□□□□ -0.49
DDX41-211	ENST00000510171		E7EWF7	191 aa		11.98	□□□□□ -0.49
DDX41-211	ENST00000510171	PIK3CD	O00329	1044 aa		11.98	□□□□□ -0.49
DDX41-211	ENST00000510171	MEIS2	O14770	477 aa		11.98	□□□□□ -0.49
DDX41-211	ENST00000510171	ATP9A	O75110	1047 aa		11.98	□□□□□ -0.49
DDX41-211	ENST00000510171	LINC00271	P0C7V0	271 aa		11.98	□□□□□ -0.49
DDX41-211	ENST00000510171	MARK3	P27448	753 aa		11.98	□□□□□ -0.49
DDX41-211	ENST00000510171	IRS1	P35568	1242 aa		11.98	□□□□□ -0.49
DDX41-211	ENST00000510171	PTH1R	Q03431	593 aa		11.98	□□□□□ -0.49
DDX41-211	ENST00000510171	PPFIA1	Q13136	1202 aa		11.98	□□□□□ -0.49
DDX41-211	ENST00000510171	SMAD2	Q15796	467 aa	Known RBP	11.98	□□□□□ -0.49
DDX41-211	ENST00000510171	CLUL1	Q15846	466 aa		11.98	□□□□□ -0.49
DDX41-211	ENST00000510171	GRIK4	Q16099	956 aa		11.98	□□□□□ -0.49
DDX41-211	ENST00000510171	CTCFL	Q8NI51	663 aa	Predicted RBP	11.98	□□□□□ -0.49
DDX41-211	ENST00000510171	IGDCC4	Q8TDY8	1250 aa		11.98	□□□□□ -0.49
DDX41-211	ENST00000510171	DNAJB3	Q8WWF6	145 aa		11.98	□□□□□ -0.49
DDX41-211	ENST00000510171	GLG1	Q92896	1179 aa		11.98	□□□□□ -0.49
DDX41-211	ENST00000510171	ZNF689	Q96CS4	500 aa	Predicted RBP	11.98	□□□□□ -0.49
DDX41-211	ENST00000510171	GPRASP2	Q96D09	838 aa		11.98	□□□□□ -0.49
DDX41-211	ENST00000510171	MAP3K14	Q99558	947 aa		11.98	□□□□□ -0.49
DDX41-211	ENST00000510171	PLVAP	Q9BX97	442 aa		11.98	□□□□□ -0.49
DDX41-211	ENST00000510171	IGFLR1	Q9H665	355 aa		11.98	□□□□□ -0.49
DDX41-211	ENST00000510171	TUBE1	Q9UJT0	475 aa		11.98	□□□□□ -0.49
DDX41-211	ENST00000510171	GSTTP1	A0A1W2PQM5	241 aa		11.97	□□□□□ -0.49
DDX41-211	ENST00000510171	MBLAC1	A4D2B0	266 aa	Predicted RBP	11.97	□□□□□ -0.49
DDX41-211	ENST00000510171	MBTPS2	O43462	519 aa		11.97	□□□□□ -0.49
DDX41-211	ENST00000510171	DGKI	O75912	1065 aa		11.97	□□□□□ -0.49
DDX41-211	ENST00000510171	KCNA2	P16389	499 aa		11.97	□□□□□ -0.49
DDX41-211	ENST00000510171	SMARCA1	P28370	1054 aa		11.97	□□□□□ -0.49
DDX41-211	ENST00000510171	KIF5B	P33176	963 aa		11.97	□□□□□ -0.49
DDX41-211	ENST00000510171	GNAQ	P50148	359 aa		11.97	□□□□□ -0.49
DDX41-211	ENST00000510171	DLX2	Q07687	328 aa	Predicted RBP	11.97	□□□□□ -0.49
DDX41-211	ENST00000510171	FBXO47	Q5MNV8	452 aa		11.97	□□□□□ -0.49
DDX41-211	ENST00000510171	TSHZ1	Q6ZSZ6	1077 aa		11.97	□□□□□ -0.49
DDX41-211	ENST00000510171	MFSD14A	Q96MC6	490 aa		11.97	□□□□□ -0.49
DDX41-211	ENST00000510171	FBXL18	Q96ME1	805 aa		11.97	□□□□□ -0.49
DDX41-211	ENST00000510171	LZTS2	Q9BRK4	669 aa		11.97	□□□□□ -0.49
DDX41-211	ENST00000510171	SPZ1	Q9BXG8	430 aa		11.97	□□□□□ -0.49
DDX41-211	ENST00000510171	SMARCAD1	Q9H4L7	1026 aa		11.97	□□□□□ -0.49
DDX41-211	ENST00000510171	PSTPIP2	Q9H939	334 aa		11.97	□□□□□ -0.49
DDX41-211	ENST00000510171	SEC63	Q9UGP8	760 aa	Known RBP	11.97	□□□□□ -0.49
DDX41-211	ENST00000510171	PLAGL2	Q9UPG8	496 aa		11.97	□□□□□ -0.49
DDX41-211	ENST00000510171	CDY2A	Q9Y6F7	541 aa		11.97	□□□□□ -0.49
DDX41-211	ENST00000510171	PTPRS	Q13332	1948 aa		11.97	□□□□□ -0.49
DDX41-211	ENST00000510171	RRN3P2	A6NIE6	340 aa		11.96	□□□□□ -0.49
DDX41-211	ENST00000510171	STXBP3	O00186	592 aa		11.96	□□□□□ -0.49
DDX41-211	ENST00000510171	CSPG5	O95196	566 aa		11.96	□□□□□ -0.49
DDX41-211	ENST00000510171	MMP1	P03956	469 aa		11.96	□□□□□ -0.49
DDX41-211	ENST00000510171	RPLP2	P05387	115 aa	Known RBP	11.96	□□□□□ -0.49
DDX41-211	ENST00000510171	ITGB5	P18084	799 aa		11.96	□□□□□ -0.49
DDX41-211	ENST00000510171	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.96	□□□□□ -0.49
DDX41-211	ENST00000510171	MRE11	P49959	708 aa		11.96	□□□□□ -0.49
DDX41-211	ENST00000510171	ADAM15	Q13444	863 aa		11.96	□□□□□ -0.49
DDX41-211	ENST00000510171	SMAD4	Q13485	552 aa	Known RBP	11.96	□□□□□ -0.49
DDX41-211	ENST00000510171	MTMR1	Q13613	665 aa		11.96	□□□□□ -0.49
DDX41-211	ENST00000510171	NAALADL2	Q58DX5	795 aa		11.96	□□□□□ -0.49

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