RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 PRC1O43663 620 aa6.13□□□□□ -1.43
NEK1-204ENST00000509912 ECI1P42126 302 aa6.13□□□□□ -1.43
NEK1-204ENST00000509912 GRAPQ13588 217 aa6.13□□□□□ -1.43
NEK1-204ENST00000509912 DYMQ7RTS9 669 aa6.13□□□□□ -1.43
NEK1-204ENST00000509912 CDH24Q86UP0 819 aa6.13□□□□□ -1.43
NEK1-204ENST00000509912 WFDC8Q8IUA0 241 aa6.13□□□□□ -1.43
NEK1-204ENST00000509912 SLFN12Q8IYM2 578 aa6.13□□□□□ -1.43
NEK1-204ENST00000509912 ZNF513Q8N8E2 541 aaPredicted RBP6.13□□□□□ -1.43
NEK1-204ENST00000509912 GRAPLQ8TC17 118 aaPredicted RBP6.13□□□□□ -1.43
NEK1-204ENST00000509912 TRIM47Q96LD4 638 aa6.13□□□□□ -1.43
NEK1-204ENST00000509912 GPRC5CQ9NQ84 441 aa6.13□□□□□ -1.43
NEK1-204ENST00000509912 AASDHPPTQ9NRN7 309 aa6.13□□□□□ -1.43
NEK1-204ENST00000509912 FAM105AQ9NUU6 356 aa6.13□□□□□ -1.43
NEK1-204ENST00000509912 MCM8Q9UJA3 840 aa6.13□□□□□ -1.43
NEK1-204ENST00000509912 IRS2Q9Y4H2 1338 aa6.13□□□□□ -1.43
NEK1-204ENST00000509912 DYNC1LI2O43237 492 aaPredicted RBP6.13□□□□□ -1.43
NEK1-204ENST00000509912 SOX5P35711 763 aa6.13□□□□□ -1.43
NEK1-204ENST00000509912 RHBDL3P58872 404 aa6.13□□□□□ -1.43
NEK1-204ENST00000509912 CC2D1BQ5T0F9 858 aaKnown RBP6.13□□□□□ -1.43
NEK1-204ENST00000509912 GORABQ5T7V8 394 aa6.13□□□□□ -1.43
NEK1-204ENST00000509912 DENND5AQ6IQ26 1287 aa6.13□□□□□ -1.43
NEK1-204ENST00000509912 FAM117BQ6P1L5 589 aa6.13□□□□□ -1.43
NEK1-204ENST00000509912 FOXR1Q6PIV2 292 aa6.13□□□□□ -1.43
NEK1-204ENST00000509912 C20orf204Q6ZNR8 217 aa6.13□□□□□ -1.43
NEK1-204ENST00000509912 SV2AQ7L0J3 742 aa6.13□□□□□ -1.43
NEK1-204ENST00000509912 ZBED3Q96IU2 234 aaPredicted RBP6.13□□□□□ -1.43
NEK1-204ENST00000509912 PHACTR3Q96KR7 559 aa6.13□□□□□ -1.43
NEK1-204ENST00000509912 UTP14AQ9BVJ6 771 aaKnown RBP6.13□□□□□ -1.43
NEK1-204ENST00000509912 MS4A5Q9H3V2 200 aa6.13□□□□□ -1.43
NEK1-204ENST00000509912 HDAC5Q9UQL6 1122 aa6.13□□□□□ -1.43
NEK1-204ENST00000509912 SNCAIPQ9Y6H5 919 aa6.13□□□□□ -1.43
NEK1-204ENST00000509912 CSF1RP07333 972 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 GNALP38405 381 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 ECE1P42892 770 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 PMS1P54277 932 aaKnown RBP6.12□□□□□ -1.43
NEK1-204ENST00000509912 SLBPQ14493 270 aaKnown RBP eCLIP6.12□□□□□ -1.43
NEK1-204ENST00000509912 PCSK7Q16549 785 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 INTS3Q68E01 1043 aaKnown RBP6.12□□□□□ -1.43
NEK1-204ENST00000509912 CNTD1Q8N815 330 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 TMEM145Q8NBT3 493 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 ISL2Q96A47 359 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 HOOK2Q96ED9 719 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 LRGUKQ96M69 825 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 IPO9Q96P70 1041 aaKnown RBP6.12□□□□□ -1.43
NEK1-204ENST00000509912 RPS6KC1Q96S38 1066 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 RUSC1Q9BVN2 902 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 EFCC1Q9HA90 598 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 SSU72Q9NP77 194 aaKnown RBP6.12□□□□□ -1.43
NEK1-204ENST00000509912 PCDHA8Q9Y5H6 950 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 ZNF521Q96K83 1311 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 UTRNP46939 3433 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 ANKRD34BA5PLL1 514 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 GABRDO14764 452 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 DLX3O60479 287 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 MT-CO1P00395 513 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 A1BGP04217 495 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 NTRK3Q16288 839 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 PKN2Q16513 984 aaKnown RBP6.12□□□□□ -1.43
NEK1-204ENST00000509912 TMEM201Q5SNT2 666 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 PIK3R6Q5UE93 754 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 GALNT6Q8NCL4 622 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 TAF1DQ9H5J8 278 aaPredicted RBP6.12□□□□□ -1.43
NEK1-204ENST00000509912 CRTAC1Q9NQ79 661 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 ADARB2Q9NS39 739 aaKnown RBP6.12□□□□□ -1.43
NEK1-204ENST00000509912 H2AFY2Q9P0M6 372 aaPredicted RBP6.12□□□□□ -1.43
NEK1-204ENST00000509912 HACL1Q9UJ83 578 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 SLC12A7Q9Y666 1083 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 LCHNA4D1U4 455 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 LCE2BO14633 110 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 DDNO94850 711 aaPredicted RBP6.12□□□□□ -1.43
NEK1-204ENST00000509912 FKBP1CQ5VVH2 108 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 USP53Q70EK8 1073 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 DDX46Q7L014 1031 aaKnown RBP6.12□□□□□ -1.43
NEK1-204ENST00000509912 NBPF5PQ86XG9 351 aaPredicted RBP6.12□□□□□ -1.43
NEK1-204ENST00000509912 TRMT2AQ8IZ69 625 aaKnown RBP6.12□□□□□ -1.43
NEK1-204ENST00000509912 IP6K2Q9UHH9 426 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 AKT3Q9Y243 479 aa6.12□□□□□ -1.43
NEK1-204ENST00000509912 TNKSO95271 1327 aa6.11□□□□□ -1.43
NEK1-204ENST00000509912 ALX3O95076 343 aa6.11□□□□□ -1.43
NEK1-204ENST00000509912 RAB6AP20340 208 aa6.11□□□□□ -1.43
NEK1-204ENST00000509912 CD247P20963 164 aa6.11□□□□□ -1.43
NEK1-204ENST00000509912 ARL4DP49703 201 aa6.11□□□□□ -1.43
NEK1-204ENST00000509912 MAP2K1Q02750 393 aaPredicted RBP6.11□□□□□ -1.43
NEK1-204ENST00000509912 BIRC2Q13490 618 aa6.11□□□□□ -1.43
NEK1-204ENST00000509912 HSP90AA2PQ14568 343 aaPredicted RBP6.11□□□□□ -1.43
NEK1-204ENST00000509912 KIF4BQ2VIQ3 1234 aa6.11□□□□□ -1.43
NEK1-204ENST00000509912 NOL9Q5SY16 702 aaKnown RBP6.11□□□□□ -1.43
NEK1-204ENST00000509912 WWC2Q6AWC2 1192 aa6.11□□□□□ -1.43
NEK1-204ENST00000509912 NLRP10Q86W26 655 aa6.11□□□□□ -1.43
NEK1-204ENST00000509912 CRIPAKQ8N1N5 446 aa6.11□□□□□ -1.43
NEK1-204ENST00000509912 GPR101Q96P66 508 aaPredicted RBP6.11□□□□□ -1.43
NEK1-204ENST00000509912 SLC5A4Q9NY91 659 aa6.11□□□□□ -1.43
NEK1-204ENST00000509912 CGGBP1Q9UFW8 167 aaPredicted RBP6.11□□□□□ -1.43
NEK1-204ENST00000509912 DAGLAQ9Y4D2 1042 aa6.11□□□□□ -1.43
NEK1-204ENST00000509912 MAPK8IP3Q9UPT6 1336 aa6.11□□□□□ -1.43
NEK1-204ENST00000509912 SPDYE3A6NKU9 549 aa6.11□□□□□ -1.43
NEK1-204ENST00000509912 SHISA8B8ZZ34 492 aa6.11□□□□□ -1.43
NEK1-204ENST00000509912 STXBP3O00186 592 aa6.11□□□□□ -1.43
NEK1-204ENST00000509912 RGS13O14921 159 aa6.11□□□□□ -1.43
NEK1-204ENST00000509912 PLD2O14939 933 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms