RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 GPR20Q99678 358 aa16.75■□□□□ 0.27
HMGCL-208ENST00000509389 LZTS2Q9BRK4 669 aa16.75■□□□□ 0.27
HMGCL-208ENST00000509389 NID2Q14112 1375 aa16.74■□□□□ 0.27
HMGCL-208ENST00000509389 MICAL3Q7RTP6 2002 aa16.74■□□□□ 0.27
HMGCL-208ENST00000509389 RSPH10B2B2RC85 870 aa16.74■□□□□ 0.27
HMGCL-208ENST00000509389 PIK3CDO00329 1044 aa16.74■□□□□ 0.27
HMGCL-208ENST00000509389 TREHO43280 583 aa16.74■□□□□ 0.27
HMGCL-208ENST00000509389 LPXNO60711 386 aa16.74■□□□□ 0.27
HMGCL-208ENST00000509389 GJB5O95377 273 aa16.74■□□□□ 0.27
HMGCL-208ENST00000509389 RSPH10BP0C881 870 aa16.74■□□□□ 0.27
HMGCL-208ENST00000509389 GNAQP50148 359 aa16.74■□□□□ 0.27
HMGCL-208ENST00000509389 TFF2Q03403 129 aa16.74■□□□□ 0.27
HMGCL-208ENST00000509389 ST3GAL1Q11201 340 aa16.74■□□□□ 0.27
HMGCL-208ENST00000509389 PCNX4Q63HM2 1172 aa16.74■□□□□ 0.27
HMGCL-208ENST00000509389 NFXL1Q6ZNB6 911 aa16.74■□□□□ 0.27
HMGCL-208ENST00000509389 TMTC2Q8N394 836 aa16.74■□□□□ 0.27
HMGCL-208ENST00000509389 SRBD1Q8N5C6 995 aaKnown RBP16.74■□□□□ 0.27
HMGCL-208ENST00000509389 TMEM87BQ96K49 555 aa16.74■□□□□ 0.27
HMGCL-208ENST00000509389 ZSCAN31Q96LW9 406 aaPredicted RBP16.74■□□□□ 0.27
HMGCL-208ENST00000509389 RAD9AQ99638 391 aa16.74■□□□□ 0.27
HMGCL-208ENST00000509389 RNPEPQ9H4A4 650 aa16.74■□□□□ 0.27
HMGCL-208ENST00000509389 SH2B1Q9NRF2 756 aaPredicted RBP16.74■□□□□ 0.27
HMGCL-208ENST00000509389 SEC63Q9UGP8 760 aaKnown RBP16.74■□□□□ 0.27
HMGCL-208ENST00000509389 TELO2Q9Y4R8 837 aa16.74■□□□□ 0.27
HMGCL-208ENST00000509389 BDP1A6H8Y1 2624 aa16.73■□□□□ 0.27
HMGCL-208ENST00000509389 EMSYQ7Z589 1322 aa16.73■□□□□ 0.27
HMGCL-208ENST00000509389 MUC3AQ02505 3323 aa16.73■□□□□ 0.27
HMGCL-208ENST00000509389 CCDC69A6NI79 296 aa16.73■□□□□ 0.27
HMGCL-208ENST00000509389 LARGE1O95461 756 aa16.73■□□□□ 0.27
HMGCL-208ENST00000509389 RXRAP19793 462 aa16.73■□□□□ 0.27
HMGCL-208ENST00000509389 FAM117BQ6P1L5 589 aa16.73■□□□□ 0.27
HMGCL-208ENST00000509389 XRRA1Q6P2D8 792 aa16.73■□□□□ 0.27
HMGCL-208ENST00000509389 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.73■□□□□ 0.27
HMGCL-208ENST00000509389 CMTR1Q8N1G2 835 aaKnown RBP16.73■□□□□ 0.27
HMGCL-208ENST00000509389 DBF4BQ8NFT6 615 aa16.73■□□□□ 0.27
HMGCL-208ENST00000509389 UHRF1Q96T88 793 aaPredicted RBP16.73■□□□□ 0.27
HMGCL-208ENST00000509389 TPCN1Q9ULQ1 816 aa16.73■□□□□ 0.27
HMGCL-208ENST00000509389 KAT6AQ92794 2004 aa16.72■□□□□ 0.27
HMGCL-208ENST00000509389 BMP1P13497 986 aa16.72■□□□□ 0.27
HMGCL-208ENST00000509389 LIFRP42702 1097 aa16.72■□□□□ 0.27
HMGCL-208ENST00000509389 MKRN4PQ13434 485 aaPredicted RBP16.72■□□□□ 0.27
HMGCL-208ENST00000509389 UTP14CQ5TAP6 766 aaKnown RBP16.72■□□□□ 0.27
HMGCL-208ENST00000509389 Q6ZUG5 572 aa16.72■□□□□ 0.27
HMGCL-208ENST00000509389 TRIM50Q86XT4 487 aa16.72■□□□□ 0.27
HMGCL-208ENST00000509389 TCEANC2Q96MN5 208 aa16.72■□□□□ 0.27
HMGCL-208ENST00000509389 SENP7Q9BQF6 1050 aa16.72■□□□□ 0.27
HMGCL-208ENST00000509389 SETD4Q9NVD3 440 aa16.72■□□□□ 0.27
HMGCL-208ENST00000509389 DAXXQ9UER7 740 aaPredicted RBP16.72■□□□□ 0.27
HMGCL-208ENST00000509389 LINC01553A4QN01 128 aa16.71■□□□□ 0.27
HMGCL-208ENST00000509389 CALM1P0DP23 149 aa16.71■□□□□ 0.27
HMGCL-208ENST00000509389 CALM2P0DP24 149 aa16.71■□□□□ 0.27
HMGCL-208ENST00000509389 CALM3P0DP25 149 aa16.71■□□□□ 0.27
HMGCL-208ENST00000509389 KCNQ1P51787 676 aa16.71■□□□□ 0.27
HMGCL-208ENST00000509389 ERVK-21P61565 698 aa16.71■□□□□ 0.27
HMGCL-208ENST00000509389 ME3Q16798 604 aa16.71■□□□□ 0.27
HMGCL-208ENST00000509389 AAK1Q2M2I8 961 aa16.71■□□□□ 0.27
HMGCL-208ENST00000509389 PLEKHG4Q58EX7 1191 aa16.71■□□□□ 0.27
HMGCL-208ENST00000509389 NLRX1Q86UT6 975 aa16.71■□□□□ 0.27
HMGCL-208ENST00000509389 RAB11FIP4Q86YS3 637 aa16.71■□□□□ 0.27
HMGCL-208ENST00000509389 GDPD5Q8WTR4 605 aa16.71■□□□□ 0.27
HMGCL-208ENST00000509389 TGS1Q96RS0 853 aaKnown RBP16.71■□□□□ 0.27
HMGCL-208ENST00000509389 OSBPL7Q9BZF2 842 aa16.71■□□□□ 0.27
HMGCL-208ENST00000509389 PSTPIP2Q9H939 334 aa16.71■□□□□ 0.27
HMGCL-208ENST00000509389 SIP14410 1827 aa16.71■□□□□ 0.27
HMGCL-208ENST00000509389 hCG_1642624A0A1W2PR95 340 aa16.7■□□□□ 0.26
HMGCL-208ENST00000509389 AMHP03971 560 aa16.7■□□□□ 0.26
HMGCL-208ENST00000509389 GNAT1P11488 350 aa16.7■□□□□ 0.26
HMGCL-208ENST00000509389 SP4Q02446 784 aa16.7■□□□□ 0.26
HMGCL-208ENST00000509389 SGMS1Q86VZ5 419 aa16.7■□□□□ 0.26
HMGCL-208ENST00000509389 NECAB3Q96P71 396 aaPredicted RBP16.7■□□□□ 0.26
HMGCL-208ENST00000509389 LRRC2Q9BYS8 371 aa16.7■□□□□ 0.26
HMGCL-208ENST00000509389 SUGCTQ9HAC7 445 aa16.7■□□□□ 0.26
HMGCL-208ENST00000509389 ZNF215Q9UL58 517 aaPredicted RBP16.7■□□□□ 0.26
HMGCL-208ENST00000509389 MTUS1Q9ULD2 1270 aa16.7■□□□□ 0.26
HMGCL-208ENST00000509389 CIZ1Q9ULV3 898 aaPredicted RBP16.7■□□□□ 0.26
HMGCL-208ENST00000509389 COG5Q9UP83 839 aa16.7■□□□□ 0.26
HMGCL-208ENST00000509389 SLC12A7Q9Y666 1083 aa16.7■□□□□ 0.26
HMGCL-208ENST00000509389 BRWD1Q9NSI6 2320 aa16.69■□□□□ 0.26
HMGCL-208ENST00000509389 ATP9AO75110 1047 aa16.69■□□□□ 0.26
HMGCL-208ENST00000509389 CAND2O75155 1236 aa16.69■□□□□ 0.26
HMGCL-208ENST00000509389 CTSHP09668 335 aa16.69■□□□□ 0.26
HMGCL-208ENST00000509389 ADAM17P78536 824 aa16.69■□□□□ 0.26
HMGCL-208ENST00000509389 UBE2SQ16763 222 aa16.69■□□□□ 0.26
HMGCL-208ENST00000509389 MYOCDQ8IZQ8 938 aa16.69■□□□□ 0.26
HMGCL-208ENST00000509389 CCDC82Q8N4S0 544 aa16.69■□□□□ 0.26
HMGCL-208ENST00000509389 GIMAP8Q8ND71 665 aaPredicted RBP16.69■□□□□ 0.26
HMGCL-208ENST00000509389 BRF1Q92994 677 aa16.69■□□□□ 0.26
HMGCL-208ENST00000509389 GPRASP2Q96D09 838 aa16.69■□□□□ 0.26
HMGCL-208ENST00000509389 LMCD1Q9NZU5 365 aa16.69■□□□□ 0.26
HMGCL-208ENST00000509389 INSL6Q9Y581 213 aa16.69■□□□□ 0.26
HMGCL-208ENST00000509389 KCNA2P16389 499 aa16.68■□□□□ 0.26
HMGCL-208ENST00000509389 ITGB5P18084 799 aa16.68■□□□□ 0.26
HMGCL-208ENST00000509389 ARHGAP4P98171 946 aa16.68■□□□□ 0.26
HMGCL-208ENST00000509389 TMTC3Q6ZXV5 915 aa16.68■□□□□ 0.26
HMGCL-208ENST00000509389 FANCBQ8NB91 859 aa16.68■□□□□ 0.26
HMGCL-208ENST00000509389 LMBR1Q8WVP7 490 aa16.68■□□□□ 0.26
HMGCL-208ENST00000509389 SEPT8Q92599 483 aa16.68■□□□□ 0.26
HMGCL-208ENST00000509389 HLA-CQ95604 372 aa16.68■□□□□ 0.26
HMGCL-208ENST00000509389 GTF3C6Q969F1 213 aa16.68■□□□□ 0.26
HMGCL-208ENST00000509389 ZNF274Q96GC6 653 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms