RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 MTUS1Q9ULD2 1270 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 RPS6KL1Q9Y6S9 549 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 NHSQ6T4R5 1651 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 SERTM1A2A2V5 107 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 GPR182O15218 404 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 P4HA2O15460 535 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 IMPDH2P12268 514 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 KRT5P13647 590 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 PMLP29590 882 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 MRE11P49959 708 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 DDB1Q16531 1140 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 HEATR6Q6AI08 1181 aaKnown RBP4.31□□□□□ -1.72
NEDD4-209ENST00000508871 VASH1Q7L8A9 365 aaPredicted RBP4.31□□□□□ -1.72
NEDD4-209ENST00000508871 KIAA1328Q86T90 577 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 TTC30AQ86WT1 665 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 LILRB2Q8N423 598 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 GABPB2Q8TAK5 448 aaPredicted RBP4.31□□□□□ -1.72
NEDD4-209ENST00000508871 CCDC74AQ96AQ1 378 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 ZC3H12CQ9C0D7 883 aaKnown RBP4.31□□□□□ -1.72
NEDD4-209ENST00000508871 SLAMF7Q9NQ25 335 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 KRT82Q9NSB4 513 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 ANKIB1Q9P2G1 1089 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 PCDHGA4Q9Y5G9 962 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 DISP2A7MBM2 1401 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 GIPC1O14908 333 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 MUSKO15146 869 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 VAMP4O75379 141 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 PDE6AP16499 860 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 TATP17735 454 aaPredicted RBP4.31□□□□□ -1.72
NEDD4-209ENST00000508871 VCAM1P19320 739 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 PRKG2Q13237 762 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 ZNF174Q15697 407 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 GNASQ5JWF2 1037 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 CATSPER4Q7RTX7 472 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 GALNTL5Q7Z4T8 443 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 TREML1Q86YW5 311 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 FAM184AQ8NB25 1140 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 MCUQ8NE86 351 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 FBXO41Q8TF61 875 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 ZFPM2Q8WW38 1151 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 STAMQ92783 540 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 ATP2A3Q93084 1043 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 MRPL9Q9BYD2 267 aaKnown RBP4.31□□□□□ -1.72
NEDD4-209ENST00000508871 KRT23Q9C075 422 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 PCDH10Q9P2E7 1040 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 SUCOQ9UBS9 1254 aaKnown RBP4.31□□□□□ -1.72
NEDD4-209ENST00000508871 GMEB2Q9UKD1 530 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 PCDHB10Q9UN67 800 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 DGKBQ9Y6T7 804 aa4.31□□□□□ -1.72
NEDD4-209ENST00000508871 A6NCN8 305 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 MYO1CO00159 1063 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 KPNA5O15131 536 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 GMFGO60234 142 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 GCP02774 474 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 SPARCP09486 303 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 FAM200BP0CF97 657 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 GYS1P13807 737 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 ITGA6P23229 1130 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 NFKBIAP25963 317 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 MCM7P33993 719 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 CTCFP49711 727 aaPredicted RBP4.3□□□□□ -1.72
NEDD4-209ENST00000508871 ARHGAP4P98171 946 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 KIF23Q02241 960 aaPredicted RBP4.3□□□□□ -1.72
NEDD4-209ENST00000508871 KIF5AQ12840 1032 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 MUM1Q2TAK8 710 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 PPP4R3BQ5MIZ7 849 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 CHD1LQ86WJ1 897 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 MPP5Q8N3R9 675 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 BHMTQ93088 406 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 KIF12Q96FN5 646 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 PHACTR3Q96KR7 559 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 TAOK3Q9H2K8 898 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 STK38LQ9Y2H1 464 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 PCDHB3Q9Y5E6 796 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 KCPQ6ZWJ8 1503 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 ARAP2Q8WZ64 1704 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 TNS2Q63HR2 1409 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 TRAV20A0A0B4J274 112 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 WBP4O75554 376 aaKnown RBP4.3□□□□□ -1.72
NEDD4-209ENST00000508871 HSPA4LO95757 839 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 WEE1P30291 646 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 RCN2Q14257 317 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 GRM3Q14832 879 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 MTHFSDQ2M296 383 aaKnown RBP4.3□□□□□ -1.72
NEDD4-209ENST00000508871 TWISTNBQ3B726 338 aaPredicted RBP4.3□□□□□ -1.72
NEDD4-209ENST00000508871 KAZNQ674X7 775 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 FAM178BQ8IXR5 827 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 CCDC65Q8IXS2 484 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 NBPF15Q8N660 670 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 HVCN1Q96D96 273 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 THAP9Q9H5L6 903 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 ATP6V1HQ9UI12 483 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 COL15A1P39059 1388 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 J3KRW8 73 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 ZBTB43O43298 467 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 ATP6V1G1O75348 118 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 CIB2O75838 187 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 INMTO95050 263 aa4.3□□□□□ -1.72
NEDD4-209ENST00000508871 AFPP02771 609 aaKnown RBP4.3□□□□□ -1.72
NEDD4-209ENST00000508871 HMOX1P09601 288 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms