RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 RPL6Q02878 288 aaKnown RBP4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 PPATQ06203 517 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 TCP10Q12799 353 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 PICALMQ13492 652 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 VGLL4Q14135 290 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 NFKBIBQ15653 356 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 CCDC158Q5M9N0 1113 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 FKBP1CQ5VVH2 108 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 FBXL19Q6PCT2 694 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 HHIPL2Q6UWX4 724 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 GADL1Q6ZQY3 521 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 PRR23CQ6ZRP0 262 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 BEND4Q6ZU67 534 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 MIGA2Q7L4E1 593 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 OTOP1Q7RTM1 612 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 KRTAP1-3Q8IUG1 177 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 CRACR2BQ8N4Y2 399 aaPredicted RBP4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 GATAD2BQ8WXI9 593 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 COA7Q96BR5 231 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 FAM84BQ96KN1 310 aaPredicted RBP4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 ZDHHC15Q96MV8 337 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 AS3MTQ9HBK9 375 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 ZCCHC17Q9NP64 241 aaKnown RBP4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 SSU72Q9NP77 194 aaKnown RBP4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 DISC1Q9NRI5 854 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 RAI14Q9P0K7 980 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 LRP2BPQ9P2M1 347 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 ADAMTS1Q9UHI8 967 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 FZD1Q9UP38 647 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 PTPN22Q9Y2R2 807 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 RAXQ9Y2V3 346 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 SUPT16HQ9Y5B9 1047 aaKnown RBP4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 NR2E3Q9Y5X4 410 aa4.59□□□□□ -1.67
HMGN1P11-201ENST00000508668 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 FAM95CA0A1B0GW59 222 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 HMX2A2RU54 273 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 WTIPA6NIX2 430 aaPredicted RBP4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 PDHXO00330 501 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 TNPO2O14787 897 aaKnown RBP4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 SRGAP3O43295 1099 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 CIAO1O76071 339 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 NFICP08651 508 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 FURINP09958 794 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 GARTP22102 1010 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 ERCC5P28715 1186 aaPredicted RBP4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 PSMC4P43686 418 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 CACNB3P54284 484 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 CASP7P55210 303 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 PPIL2Q13356 520 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 RSPO4Q2I0M5 234 aaPredicted RBP4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 TTC39AQ5SRH9 613 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 AMOTL1Q8IY63 956 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 CERS5Q8N5B7 392 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 RNF214Q8ND24 703 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 FBXO27Q8NI29 283 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 FAM151AQ8WW52 585 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 ZKSCAN4Q969J2 545 aaPredicted RBP4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 SPON2Q9BUD6 331 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 MRIQ9BWK5 157 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 KRTAP9-2Q9BYQ4 174 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 PUS3Q9BZE2 481 aaKnown RBP4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 SEMA6CQ9H3T2 930 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 CHMP4BQ9H444 224 aaKnown RBP4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 GSX1Q9H4S2 264 aaPredicted RBP4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 TMOD4Q9NZQ9 345 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 STOML1Q9UBI4 398 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 DDX41Q9UJV9 622 aaKnown RBP4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 SNCAIPQ9Y6H5 919 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 CACNA1FO60840 1977 aa4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 POLR2AP24928 1970 aaKnown RBP4.58□□□□□ -1.68
HMGN1P11-201ENST00000508668 PCNTO95613 3336 aa4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 MYPNQ86TC9 1320 aa4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 FAM221AA4D161 298 aa4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 IGF2BP3O00425 579 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 CXCL11O14625 94 aa4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 TLR2O60603 784 aa4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 CILPO75339 1184 aa4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 ENTPD3O75355 529 aa4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 GLRX3O76003 335 aaKnown RBP4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 MAP4K4O95819 1239 aaPredicted RBP4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 TFRCP02786 760 aaKnown RBP4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 GNAI2P04899 355 aa4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 HLA-DOAP06340 250 aa4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 UQCRFS1P1P0C7P4 283 aa4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 CAPN2P17655 700 aa4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 ETF1P62495 437 aaKnown RBP4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 LRRC24Q50LG9 513 aa4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 CCDC184Q52MB2 194 aa4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 EPHA10Q5JZY3 1008 aa4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 NKAPLQ5M9Q1 402 aa4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 ZBTB37Q5TC79 503 aa4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 ANKRD23Q86SG2 305 aa4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 CCDC84Q86UT8 332 aaPredicted RBP4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 CLEC10AQ8IUN9 316 aa4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 SMYD4Q8IYR2 804 aaPredicted RBP4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 ZNF654Q8IZM8 581 aa4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGN1P11-201ENST00000508668 KLHDC4Q8TBB5 520 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 877.4 ms