RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 ECM29Q5VYK3 1845 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 MAST2Q6P0Q8 1798 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 GAKO14976 1311 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 GPR75-ASB3A0A0A6YYF3 556 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 PRR19A6NJB7 356 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 IDH1O75874 414 aaKnown RBP6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 TGFB1P01137 390 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 F13BP05160 661 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 SLFN14P0C7P3 912 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 YY1P25490 414 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 EPHX2P34913 555 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 CRKP46108 304 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 MECOMQ03112 1051 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 RING1Q06587 406 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 CFAP100Q494V2 611 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 SLC9C2Q5TAH2 1124 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 FKBP1CQ5VVH2 108 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 LRFN4Q6PJG9 635 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 AGMOQ6ZNB7 445 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 ZDHHC13Q8IUH4 622 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 FBXL6Q8N531 539 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 SHKBP1Q8TBC3 707 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 ZBED3Q96IU2 234 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 FSD1Q9BTV5 496 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 TAF1DQ9H5J8 278 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 PIH1D3Q9NQM4 214 aaKnown RBP6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 PRKAG2Q9UGJ0 569 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 PGAP2Q9UHJ9 254 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 PCDHA4Q9UN74 947 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 HIF3AQ9Y2N7 669 aa6.57□□□□□ -1.36
HMGB1P44-201ENST00000508597 MROH7-TTC4A0A0A0MT08 1334 aa6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 PITPNM2Q9BZ72 1349 aa6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 F8W031 263 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 WNT10BO00744 389 aa6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 RNF113AO15541 343 aaKnown RBP6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 PDE6AP16499 860 aa6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 CYP7A1P22680 504 aa6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 ADD2P35612 726 aa6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 EPS15P42566 896 aa6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 TNFAIP1Q13829 316 aa6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 HP1BP3Q5SSJ5 553 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 ZMYM1Q5SVZ6 1142 aa6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 TSHZ3Q63HK5 1081 aa6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 MAGEB6Q8N7X4 407 aa6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 PHC3Q8NDX5 983 aa6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 RUFY2Q8WXA3 655 aa6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 APPBP2Q92624 585 aa6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 RILPL2Q969X0 211 aa6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 ISL2Q96A47 359 aa6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 RSRP1Q9BUV0 290 aa6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 MXD3Q9BW11 206 aa6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 ANTXR1Q9H6X2 564 aa6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 HELLSQ9NRZ9 838 aa6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 TMOD2Q9NZR1 351 aa6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 GGT7Q9UJ14 662 aa6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 DDX41Q9UJV9 622 aaKnown RBP6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 JAG2Q9Y219 1238 aa6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 DAGLAQ9Y4D2 1042 aa6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 POLR2AP24928 1970 aaKnown RBP6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 RPAP1Q9BWH6 1393 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P44-201ENST00000508597 ZNF532Q9HCE3 1301 aa6.55□□□□□ -1.36
HMGB1P44-201ENST00000508597 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P44-201ENST00000508597 TCRBV5S4A2TA0A5A2 114 aa6.55□□□□□ -1.36
HMGB1P44-201ENST00000508597 FAM170BA6NMN3 283 aa6.55□□□□□ -1.36
HMGB1P44-201ENST00000508597 WDR64B1ANS9 1081 aa6.55□□□□□ -1.36
HMGB1P44-201ENST00000508597 GSPT1P15170 499 aaKnown RBP6.55□□□□□ -1.36
HMGB1P44-201ENST00000508597 GNAT2P19087 354 aa6.55□□□□□ -1.36
HMGB1P44-201ENST00000508597 SDSP20132 328 aa6.55□□□□□ -1.36
HMGB1P44-201ENST00000508597 TNNI2P48788 182 aa6.55□□□□□ -1.36
HMGB1P44-201ENST00000508597 RGS3P49796 1198 aa6.55□□□□□ -1.36
HMGB1P44-201ENST00000508597 RBM5P52756 815 aaKnown RBP eCLIP6.55□□□□□ -1.36
HMGB1P44-201ENST00000508597 PWP1Q13610 501 aa6.55□□□□□ -1.36
HMGB1P44-201ENST00000508597 LRRC14Q15048 493 aa6.55□□□□□ -1.36
HMGB1P44-201ENST00000508597 APOBEC3HQ6NTF7 200 aaKnown RBP6.55□□□□□ -1.36
HMGB1P44-201ENST00000508597 GIMAP6Q6P9H5 292 aa6.55□□□□□ -1.36
HMGB1P44-201ENST00000508597 CASC1Q6TDU7 716 aa6.55□□□□□ -1.36
HMGB1P44-201ENST00000508597 USP48Q86UV5 1035 aa6.55□□□□□ -1.36
HMGB1P44-201ENST00000508597 LDHDQ86WU2 507 aa6.55□□□□□ -1.36
HMGB1P44-201ENST00000508597 APOBEC3FQ8IUX4 373 aaKnown RBP6.55□□□□□ -1.36
HMGB1P44-201ENST00000508597 EDC3Q96F86 508 aaKnown RBP6.55□□□□□ -1.36
HMGB1P44-201ENST00000508597 PLPPR2Q96GM1 343 aa6.55□□□□□ -1.36
HMGB1P44-201ENST00000508597 IDI2Q9BXS1 227 aa6.55□□□□□ -1.36
HMGB1P44-201ENST00000508597 CCSER2Q9H7U1 834 aa6.55□□□□□ -1.36
HMGB1P44-201ENST00000508597 PPP2R3BQ9Y5P8 575 aa6.55□□□□□ -1.36
HMGB1P44-201ENST00000508597 RAD50Q92878 1312 aa6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 RNGTTO60942 597 aaKnown RBP6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 ENTPD3O75355 529 aa6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 BTDP43251 543 aa6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 ERVK-24P63145 666 aa6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 CDK5R2Q13319 367 aa6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 MCMDC2Q4G0Z9 681 aa6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 TBC1D10BQ4KMP7 808 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 ZNF394Q53GI3 561 aa6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 BNC2Q6ZN30 1099 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 CDC37L1Q7L3B6 337 aa6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 FAM83AQ86UY5 434 aa6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 SMYD4Q8IYR2 804 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 ZNF654Q8IZM8 581 aa6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 ZNF384Q8TF68 577 aa6.54□□□□□ -1.36
HMGB1P44-201ENST00000508597 DCPSQ96C86 337 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms