RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 TBC1D10CQ8IV04 446 aa10.94□□□□□ -0.66
NEDD9-211ENST00000508546 ADSSL1Q8N142 457 aa10.94□□□□□ -0.66
NEDD9-211ENST00000508546 IL17RAQ96F46 866 aa10.94□□□□□ -0.66
NEDD9-211ENST00000508546 FAM227BQ96M60 508 aa10.94□□□□□ -0.66
NEDD9-211ENST00000508546 C11orf84Q9BUA3 381 aaPredicted RBP10.94□□□□□ -0.66
NEDD9-211ENST00000508546 IFIH1Q9BYX4 1025 aaKnown RBP10.94□□□□□ -0.66
NEDD9-211ENST00000508546 RNPEPQ9H4A4 650 aa10.94□□□□□ -0.66
NEDD9-211ENST00000508546 TUT1Q9H6E5 874 aaKnown RBP10.94□□□□□ -0.66
NEDD9-211ENST00000508546 JMJD4Q9H9V9 463 aa10.94□□□□□ -0.66
NEDD9-211ENST00000508546 RWDD3Q9Y3V2 267 aa10.94□□□□□ -0.66
NEDD9-211ENST00000508546 WDR87Q6ZQQ6 2873 aa10.93□□□□□ -0.66
NEDD9-211ENST00000508546 NEDD4P46934 1319 aa10.93□□□□□ -0.66
NEDD9-211ENST00000508546 GALR2O43603 387 aaPredicted RBP10.93□□□□□ -0.66
NEDD9-211ENST00000508546 PDGFBP01127 241 aaPredicted RBP10.93□□□□□ -0.66
NEDD9-211ENST00000508546 SMIM10L2AP0DMW4 78 aa10.93□□□□□ -0.66
NEDD9-211ENST00000508546 SMIM10L2BP0DMW5 78 aa10.93□□□□□ -0.66
NEDD9-211ENST00000508546 UBA1P22314 1058 aaKnown RBP10.93□□□□□ -0.66
NEDD9-211ENST00000508546 CTNNB1P35222 781 aa10.93□□□□□ -0.66
NEDD9-211ENST00000508546 BMPR1AP36894 532 aa10.93□□□□□ -0.66
NEDD9-211ENST00000508546 SP2Q02086 613 aa10.93□□□□□ -0.66
NEDD9-211ENST00000508546 SIGLEC14Q08ET2 396 aa10.93□□□□□ -0.66
NEDD9-211ENST00000508546 HYAL1Q12794 435 aa10.93□□□□□ -0.66
NEDD9-211ENST00000508546 FAM26DQ5JW98 314 aa10.93□□□□□ -0.66
NEDD9-211ENST00000508546 DGLUCYQ7Z3D6 616 aa10.93□□□□□ -0.66
NEDD9-211ENST00000508546 FRMD5Q7Z6J6 570 aa10.93□□□□□ -0.66
NEDD9-211ENST00000508546 ZNF589Q86UQ0 364 aaPredicted RBP10.93□□□□□ -0.66
NEDD9-211ENST00000508546 IQCA1Q86XH1 822 aa10.93□□□□□ -0.66
NEDD9-211ENST00000508546 FIBCD1Q8N539 461 aa10.93□□□□□ -0.66
NEDD9-211ENST00000508546 CLP1Q92989 425 aaKnown RBP10.93□□□□□ -0.66
NEDD9-211ENST00000508546 ZKSCAN3Q9BRR0 538 aa10.93□□□□□ -0.66
NEDD9-211ENST00000508546 OSBPL7Q9BZF2 842 aa10.93□□□□□ -0.66
NEDD9-211ENST00000508546 CCDC171Q6TFL3 1326 aa10.92□□□□□ -0.66
NEDD9-211ENST00000508546 GRM6O15303 877 aa10.92□□□□□ -0.66
NEDD9-211ENST00000508546 LGALS2P05162 132 aa10.92□□□□□ -0.66
NEDD9-211ENST00000508546 PARP1P09874 1014 aaKnown RBP10.92□□□□□ -0.66
NEDD9-211ENST00000508546 GNAT1P11488 350 aa10.92□□□□□ -0.66
NEDD9-211ENST00000508546 MYCLP12524 364 aaPredicted RBP10.92□□□□□ -0.66
NEDD9-211ENST00000508546 ADAM17P78536 824 aa10.92□□□□□ -0.66
NEDD9-211ENST00000508546 PGM5Q15124 567 aa10.92□□□□□ -0.66
NEDD9-211ENST00000508546 MTMR8Q96EF0 704 aa10.92□□□□□ -0.66
NEDD9-211ENST00000508546 AMNQ9BXJ7 453 aa10.92□□□□□ -0.66
NEDD9-211ENST00000508546 USP26Q9BXU7 913 aa10.92□□□□□ -0.66
NEDD9-211ENST00000508546 KAT14Q9H8E8 782 aa10.92□□□□□ -0.66
NEDD9-211ENST00000508546 MLXIPQ9HAP2 919 aa10.92□□□□□ -0.66
NEDD9-211ENST00000508546 RC3H2Q9HBD1 1191 aaKnown RBP10.92□□□□□ -0.66
NEDD9-211ENST00000508546 PCDHB15Q9Y5E8 787 aa10.92□□□□□ -0.66
NEDD9-211ENST00000508546 PLXNA4Q9HCM2 1894 aa10.91□□□□□ -0.66
NEDD9-211ENST00000508546 ADGRA3Q8IWK6 1321 aa10.91□□□□□ -0.66
NEDD9-211ENST00000508546 DHX16O60231 1041 aaKnown RBP10.91□□□□□ -0.66
NEDD9-211ENST00000508546 SORBS3O60504 671 aa10.91□□□□□ -0.66
NEDD9-211ENST00000508546 EYA4O95677 639 aa10.91□□□□□ -0.66
NEDD9-211ENST00000508546 MMP1P03956 469 aa10.91□□□□□ -0.66
NEDD9-211ENST00000508546 CTSHP09668 335 aa10.91□□□□□ -0.66
NEDD9-211ENST00000508546 CCND2P30279 289 aa10.91□□□□□ -0.66
NEDD9-211ENST00000508546 PDE1AP54750 535 aa10.91□□□□□ -0.66
NEDD9-211ENST00000508546 MFAP1P55081 439 aaKnown RBP10.91□□□□□ -0.66
NEDD9-211ENST00000508546 ADAM15Q13444 863 aa10.91□□□□□ -0.66
NEDD9-211ENST00000508546 ENAHQ8N8S7 591 aaPredicted RBP10.91□□□□□ -0.66
NEDD9-211ENST00000508546 IL31RAQ8NI17 732 aa10.91□□□□□ -0.66
NEDD9-211ENST00000508546 NKD2Q969F2 451 aaPredicted RBP10.91□□□□□ -0.66
NEDD9-211ENST00000508546 MSLNLQ96KJ4 702 aa10.91□□□□□ -0.66
NEDD9-211ENST00000508546 YTHDC1Q96MU7 727 aaKnown RBP10.91□□□□□ -0.66
NEDD9-211ENST00000508546 PLVAPQ9BX97 442 aa10.91□□□□□ -0.66
NEDD9-211ENST00000508546 VAT1LQ9HCJ6 419 aa10.91□□□□□ -0.66
NEDD9-211ENST00000508546 CD207Q9UJ71 328 aa10.91□□□□□ -0.66
NEDD9-211ENST00000508546 MYO10Q9HD67 2058 aa10.91□□□□□ -0.66
NEDD9-211ENST00000508546 LOC730098B7Z3J9 87 aa10.9□□□□□ -0.66
NEDD9-211ENST00000508546 ZNF213O14771 459 aa10.9□□□□□ -0.66
NEDD9-211ENST00000508546 LINC01565O15544 149 aa10.9□□□□□ -0.66
NEDD9-211ENST00000508546 ICAM3P32942 547 aa10.9□□□□□ -0.66
NEDD9-211ENST00000508546 GTF2F1P35269 517 aaKnown RBP eCLIP10.9□□□□□ -0.66
NEDD9-211ENST00000508546 NMIQ13287 307 aaPredicted RBP10.9□□□□□ -0.66
NEDD9-211ENST00000508546 GPKOWQ92917 476 aaPredicted RBP eCLIP10.9□□□□□ -0.66
NEDD9-211ENST00000508546 P2RX5Q93086 422 aa10.9□□□□□ -0.66
NEDD9-211ENST00000508546 PPP2R3CQ969Q6 453 aa10.9□□□□□ -0.66
NEDD9-211ENST00000508546 ZNF689Q96CS4 500 aaPredicted RBP10.9□□□□□ -0.66
NEDD9-211ENST00000508546 ZSCAN10Q96SZ4 725 aaPredicted RBP10.9□□□□□ -0.66
NEDD9-211ENST00000508546 EHMT1Q9H9B1 1298 aa10.9□□□□□ -0.66
NEDD9-211ENST00000508546 SETD4Q9NVD3 440 aa10.9□□□□□ -0.66
NEDD9-211ENST00000508546 PCDHA1Q9Y5I3 950 aa10.9□□□□□ -0.66
NEDD9-211ENST00000508546 B4E1Z4 1266 aa10.89□□□□□ -0.67
NEDD9-211ENST00000508546 NOP56O00567 594 aaKnown RBP10.89□□□□□ -0.67
NEDD9-211ENST00000508546 ZBTB5O15062 677 aa10.89□□□□□ -0.67
NEDD9-211ENST00000508546 PPP1R11O60927 126 aaPredicted RBP10.89□□□□□ -0.67
NEDD9-211ENST00000508546 STAM2O75886 525 aa10.89□□□□□ -0.67
NEDD9-211ENST00000508546 CHRNA1P02708 482 aa10.89□□□□□ -0.67
NEDD9-211ENST00000508546 HOXA13P31271 388 aaPredicted RBP10.89□□□□□ -0.67
NEDD9-211ENST00000508546 TRAF1Q13077 416 aa10.89□□□□□ -0.67
NEDD9-211ENST00000508546 CAMK1Q14012 370 aa10.89□□□□□ -0.67
NEDD9-211ENST00000508546 NEDD9Q14511 834 aa10.89□□□□□ -0.67
NEDD9-211ENST00000508546 CBX2Q14781 532 aaPredicted RBP10.89□□□□□ -0.67
NEDD9-211ENST00000508546 GNPTABQ3T906 1256 aa10.89□□□□□ -0.67
NEDD9-211ENST00000508546 NAALADL2Q58DX5 795 aa10.89□□□□□ -0.67
NEDD9-211ENST00000508546 METTL7BQ6UX53 244 aa10.89□□□□□ -0.67
NEDD9-211ENST00000508546 STAG2Q8N3U4 1231 aa10.89□□□□□ -0.67
NEDD9-211ENST00000508546 SMRP1Q8NCR6 262 aa10.89□□□□□ -0.67
NEDD9-211ENST00000508546 LMBR1Q8WVP7 490 aa10.89□□□□□ -0.67
NEDD9-211ENST00000508546 INPP4AQ96PE3 977 aaPredicted RBP10.89□□□□□ -0.67
NEDD9-211ENST00000508546 GPR20Q99678 358 aa10.89□□□□□ -0.67
NEDD9-211ENST00000508546 BCAS3Q9H6U6 928 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms