RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 NLRC5Q86WI3 1866 aa18.6■□□□□ 0.57
LMNA-222ENST00000508500 LCHNA4D1U4 455 aa18.6■□□□□ 0.57
LMNA-222ENST00000508500 GOLGA8AA7E2F4 631 aa18.6■□□□□ 0.57
LMNA-222ENST00000508500 GOLGA8BA8MQT2 603 aa18.6■□□□□ 0.57
LMNA-222ENST00000508500 STXBP3O00186 592 aa18.6■□□□□ 0.57
LMNA-222ENST00000508500 TNFRSF10AO00220 468 aa18.6■□□□□ 0.57
LMNA-222ENST00000508500 ADAMTS3O15072 1205 aa18.6■□□□□ 0.57
LMNA-222ENST00000508500 PARNO95453 639 aaKnown RBP18.6■□□□□ 0.57
LMNA-222ENST00000508500 POU3F3P20264 500 aaPredicted RBP18.6■□□□□ 0.57
LMNA-222ENST00000508500 ADD1P35611 737 aaKnown RBP18.6■□□□□ 0.57
LMNA-222ENST00000508500 TAP1Q03518 808 aa18.6■□□□□ 0.57
LMNA-222ENST00000508500 KRT32Q14532 448 aa18.6■□□□□ 0.57
LMNA-222ENST00000508500 CYP2W1Q8TAV3 490 aa18.6■□□□□ 0.57
LMNA-222ENST00000508500 RIC8AQ9NPQ8 531 aa18.6■□□□□ 0.57
LMNA-222ENST00000508500 JADE2Q9NQC1 790 aa18.6■□□□□ 0.57
LMNA-222ENST00000508500 PKD2L1Q9P0L9 805 aa18.6■□□□□ 0.57
LMNA-222ENST00000508500 SPDYE3A6NKU9 549 aa18.59■□□□□ 0.57
LMNA-222ENST00000508500 IGFBP4P22692 258 aa18.59■□□□□ 0.57
LMNA-222ENST00000508500 TCF7P36402 384 aaPredicted RBP18.59■□□□□ 0.57
LMNA-222ENST00000508500 THPOP40225 353 aa18.59■□□□□ 0.57
LMNA-222ENST00000508500 NAPAP54920 295 aa18.59■□□□□ 0.57
LMNA-222ENST00000508500 APOBRQ0VD83 1088 aa18.59■□□□□ 0.57
LMNA-222ENST00000508500 CCDC85BQ15834 202 aaPredicted RBP18.59■□□□□ 0.57
LMNA-222ENST00000508500 Q6ZUG5 572 aa18.59■□□□□ 0.57
LMNA-222ENST00000508500 TMEM260Q9NX78 707 aa18.59■□□□□ 0.57
LMNA-222ENST00000508500 RSPH10B2B2RC85 870 aa18.58■□□□□ 0.56
LMNA-222ENST00000508500 LGR5O75473 907 aa18.58■□□□□ 0.56
LMNA-222ENST00000508500 RSPH10BP0C881 870 aa18.58■□□□□ 0.56
LMNA-222ENST00000508500 KCNJ6P48051 423 aa18.58■□□□□ 0.56
LMNA-222ENST00000508500 CLK2P49760 499 aaKnown RBP18.58■□□□□ 0.56
LMNA-222ENST00000508500 MTMR1Q13613 665 aa18.58■□□□□ 0.56
LMNA-222ENST00000508500 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.58■□□□□ 0.56
LMNA-222ENST00000508500 GIMAP8Q8ND71 665 aaPredicted RBP18.58■□□□□ 0.56
LMNA-222ENST00000508500 DBF4BQ8NFT6 615 aa18.58■□□□□ 0.56
LMNA-222ENST00000508500 LMBR1Q8WVP7 490 aa18.58■□□□□ 0.56
LMNA-222ENST00000508500 JAKMIP1Q96N16 626 aaKnown RBP18.58■□□□□ 0.56
LMNA-222ENST00000508500 PCYT2Q99447 389 aa18.58■□□□□ 0.56
LMNA-222ENST00000508500 MXRA8Q9BRK3 442 aa18.58■□□□□ 0.56
LMNA-222ENST00000508500 BARHL2Q9NY43 387 aa18.58■□□□□ 0.56
LMNA-222ENST00000508500 ABHD14A-ACY1A0A1B0GW23 586 aa18.57■□□□□ 0.56
LMNA-222ENST00000508500 SMCO2A6NFE2 343 aa18.57■□□□□ 0.56
LMNA-222ENST00000508500 HMGB1P09429 215 aaKnown RBP18.57■□□□□ 0.56
LMNA-222ENST00000508500 ARP10275 920 aa18.57■□□□□ 0.56
LMNA-222ENST00000508500 RCAN1P53805 252 aa18.57■□□□□ 0.56
LMNA-222ENST00000508500 PLEKHG4Q58EX7 1191 aa18.57■□□□□ 0.56
LMNA-222ENST00000508500 PPP1R18Q6NYC8 613 aa18.57■□□□□ 0.56
LMNA-222ENST00000508500 BRF1Q92994 677 aa18.57■□□□□ 0.56
LMNA-222ENST00000508500 CDHR1Q96JP9 859 aa18.57■□□□□ 0.56
LMNA-222ENST00000508500 ANO3Q9BYT9 981 aa18.57■□□□□ 0.56
LMNA-222ENST00000508500 AGXT2Q9BYV1 514 aa18.57■□□□□ 0.56
LMNA-222ENST00000508500 KCNH7Q9NS40 1196 aa18.57■□□□□ 0.56
LMNA-222ENST00000508500 BRWD1Q9NSI6 2320 aa18.57■□□□□ 0.56
LMNA-222ENST00000508500 NID2Q14112 1375 aa18.56■□□□□ 0.56
LMNA-222ENST00000508500 MAFGO15525 162 aa18.56■□□□□ 0.56
LMNA-222ENST00000508500 TLL1O43897 1013 aa18.56■□□□□ 0.56
LMNA-222ENST00000508500 GJB5O95377 273 aa18.56■□□□□ 0.56
LMNA-222ENST00000508500 MRPS5P82675 430 aaKnown RBP18.56■□□□□ 0.56
LMNA-222ENST00000508500 IKBKEQ14164 716 aa18.56■□□□□ 0.56
LMNA-222ENST00000508500 PKN1Q16512 942 aa18.56■□□□□ 0.56
LMNA-222ENST00000508500 KRT40Q6A162 431 aa18.56■□□□□ 0.56
LMNA-222ENST00000508500 ADAMTS19Q8TE59 1207 aa18.56■□□□□ 0.56
LMNA-222ENST00000508500 SEPT1Q8WYJ6 367 aa18.56■□□□□ 0.56
LMNA-222ENST00000508500 ZNF215Q9UL58 517 aaPredicted RBP18.56■□□□□ 0.56
LMNA-222ENST00000508500 ATG2AQ2TAZ0 1938 aa18.56■□□□□ 0.56
LMNA-222ENST00000508500 KIF28PB7ZC32 967 aa18.55■□□□□ 0.56
LMNA-222ENST00000508500 hCG_1984214I3L0E3 225 aa18.55■□□□□ 0.56
LMNA-222ENST00000508500 CTSHP09668 335 aa18.55■□□□□ 0.56
LMNA-222ENST00000508500 RPS6KB1P23443 525 aa18.55■□□□□ 0.56
LMNA-222ENST00000508500 ADCY7P51828 1080 aa18.55■□□□□ 0.56
LMNA-222ENST00000508500 ARHGAP4P98171 946 aa18.55■□□□□ 0.56
LMNA-222ENST00000508500 PFKFB3Q16875 520 aaPredicted RBP18.55■□□□□ 0.56
LMNA-222ENST00000508500 MARCH8Q5T0T0 291 aa18.55■□□□□ 0.56
LMNA-222ENST00000508500 RUFY4Q6ZNE9 571 aa18.55■□□□□ 0.56
LMNA-222ENST00000508500 FBXL16Q8N461 479 aa18.55■□□□□ 0.56
LMNA-222ENST00000508500 ZNF713Q8N859 430 aaPredicted RBP18.55■□□□□ 0.56
LMNA-222ENST00000508500 CRYGNQ8WXF5 182 aa18.55■□□□□ 0.56
LMNA-222ENST00000508500 NAP1L2Q9ULW6 460 aaPredicted RBP18.55■□□□□ 0.56
LMNA-222ENST00000508500 MTCH2Q9Y6C9 303 aa18.55■□□□□ 0.56
LMNA-222ENST00000508500 EMSYQ7Z589 1322 aa18.54■□□□□ 0.56
LMNA-222ENST00000508500 NRCAMQ92823 1304 aa18.54■□□□□ 0.56
LMNA-222ENST00000508500 LPXNO60711 386 aa18.54■□□□□ 0.56
LMNA-222ENST00000508500 BMP1P13497 986 aa18.54■□□□□ 0.56
LMNA-222ENST00000508500 MARK3P27448 753 aa18.54■□□□□ 0.56
LMNA-222ENST00000508500 SREBF1P36956 1147 aa18.54■□□□□ 0.56
LMNA-222ENST00000508500 METAP2P50579 478 aaKnown RBP eCLIP18.54■□□□□ 0.56
LMNA-222ENST00000508500 ITGB3BPQ13352 177 aaPredicted RBP18.54■□□□□ 0.56
LMNA-222ENST00000508500 NTRK3Q16288 839 aa18.54■□□□□ 0.56
LMNA-222ENST00000508500 FAM26DQ5JW98 314 aa18.54■□□□□ 0.56
LMNA-222ENST00000508500 BLOC1S2Q6QNY1 142 aa18.54■□□□□ 0.56
LMNA-222ENST00000508500 ARNTL2Q8WYA1 636 aa18.54■□□□□ 0.56
LMNA-222ENST00000508500 ZBTB10Q96DT7 871 aa18.54■□□□□ 0.56
LMNA-222ENST00000508500 TTC3P53804 2025 aa18.54■□□□□ 0.56
LMNA-222ENST00000508500 MEIS1O00470 390 aa18.53■□□□□ 0.56
LMNA-222ENST00000508500 PPFIA3O75145 1194 aa18.53■□□□□ 0.56
LMNA-222ENST00000508500 CAND2O75155 1236 aa18.53■□□□□ 0.56
LMNA-222ENST00000508500 FOSP01100 380 aaPredicted RBP18.53■□□□□ 0.56
LMNA-222ENST00000508500 CHRNA1P02708 482 aa18.53■□□□□ 0.56
LMNA-222ENST00000508500 GNAT1P11488 350 aa18.53■□□□□ 0.56
LMNA-222ENST00000508500 CEP55Q53EZ4 464 aa18.53■□□□□ 0.56
LMNA-222ENST00000508500 FAM117BQ6P1L5 589 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms