RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 CD109Q6YHK3 1445 aa7.89□□□□□ -1.15
UBE2D3-224ENST00000508474 TTC37Q6PGP7 1564 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 STK36Q9NRP7 1315 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 hCG_2014768A0A024R1R8 64 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 A0A1B0GTH6 734 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 ACSL3O95573 720 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 NR2F2P24468 414 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 PSMC2P35998 433 aaKnown RBP7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 POLA2Q14181 598 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 ITIH4Q14624 930 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 KRT39Q6A163 491 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 RINT1Q6NUQ1 792 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 NFRKBQ6P4R8 1299 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 FAM47EQ6ZV65 393 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 BZW1Q7L1Q6 419 aaKnown RBP7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 NFATC2IPQ8NCF5 419 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 MAML3Q96JK9 1138 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 NLRP3Q96P20 1036 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 CSRNP1Q96S65 589 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 LRRC1Q9BTT6 524 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 ITGB1BP2Q9UKP3 347 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 CAPN11Q9UMQ6 739 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 PCDHA4Q9UN74 947 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 PCDHA12Q9UN75 941 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 APOBEC2Q9Y235 224 aaKnown RBP7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 SNX24Q9Y343 169 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 WDR7Q9Y4E6 1490 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 SGK1O00141 431 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 SH2B2O14492 632 aaPredicted RBP7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 PDE8AO60658 829 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 GAP43P17677 238 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 VHLP40337 213 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 CYP2J2P51589 502 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 RGS9BPQ6ZS82 235 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 ZCRB1Q8TBF4 217 aaKnown RBP7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 SPC25Q9HBM1 224 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 ETAA1Q9NY74 926 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 EHD2Q9NZN4 543 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 HDAC6Q9UBN7 1215 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 NUB1Q9Y5A7 615 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 LRRIQ3A6PVS8 624 aaPredicted RBP7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 PRDM1O75626 825 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 KRT37O76014 449 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 SCP2P22307 547 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 LIFRP42702 1097 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 KPNA2P52292 529 aaKnown RBP7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 KLHL38Q2WGJ6 581 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 SRRM1Q8IYB3 904 aaKnown RBP7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 PROM2Q8N271 834 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 SCYL1Q96KG9 808 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 GPCPD1Q9NPB8 672 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 TRPC6Q9Y210 931 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 SLC4A7Q9Y6M7 1214 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 ATP10BO94823 1461 aa7.88□□□□□ -1.15
UBE2D3-224ENST00000508474 hCG_1642624A0A1W2PR95 340 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 KRT10P13645 584 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 KRT81Q14533 505 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 CDC37Q16543 378 aaPredicted RBP7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 SWT1Q5T5J6 900 aaKnown RBP7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 RASSF3Q86WH2 238 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 MFN1Q8IWA4 741 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 CDAN1Q8IWY9 1227 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 SLC17A8Q8NDX2 589 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 NYXQ9GZU5 481 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 KDM4CQ9H3R0 1056 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 MRPL47Q9HD33 250 aaKnown RBP7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 TRPC5Q9UL62 973 aaPredicted RBP7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 L1RE1Q9UN81 338 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 TSC22D4Q9Y3Q8 395 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 PITPNM2Q9BZ72 1349 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 EIF4G3O43432 1585 aaKnown RBP7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 COBLO75128 1261 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 ECM2O94769 699 aaPredicted RBP7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 GHRP10912 638 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 PTK2Q05397 1052 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 DNAL1Q4LDG9 190 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 CCDC125Q86Z20 511 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 PAPOLBQ9NRJ5 636 aaKnown RBP7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 LIMA1Q9UHB6 759 aaKnown RBP7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 CFAP74Q9C0B2 1584 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 CDHR2Q9BYE9 1310 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 H0YCG3 227 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 PRPF3O43395 683 aaKnown RBP7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 CHN1P15882 459 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 SERPINB3P29508 390 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 PDZD4Q76G19 769 aaPredicted RBP7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 PCGF5Q86SE9 256 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 PACS2Q86VP3 889 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 TTLL11Q8NHH1 800 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 TTC1Q99614 292 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 C10orf88Q9H8K7 445 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 MLXIPQ9HAP2 919 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 DLGAP2Q9P1A6 1054 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 LCMT1Q9UIC8 334 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 MAD1L1Q9Y6D9 718 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 AATKQ6ZMQ8 1374 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 PRDM15P57071 1507 aaPredicted RBP7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 hCG_1984214I3L0E3 225 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 CHMP2AO43633 222 aa7.87□□□□□ -1.15
UBE2D3-224ENST00000508474 SH3BP5O60239 455 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms