RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 SEPT1Q8WYJ6 367 aa10.69□□□□□ -0.7
DDX41-209ENST00000508279 DHX38Q92620 1227 aaKnown RBP10.69□□□□□ -0.7
DDX41-209ENST00000508279 ATP6V0A1Q93050 837 aa10.69□□□□□ -0.7
DDX41-209ENST00000508279 MTIF3Q9H2K0 278 aaKnown RBP10.69□□□□□ -0.7
DDX41-209ENST00000508279 JPH1Q9HDC5 661 aaPredicted RBP10.69□□□□□ -0.7
DDX41-209ENST00000508279 SLC9A2Q9UBY0 812 aa10.69□□□□□ -0.7
DDX41-209ENST00000508279 WDR81Q562E7 1941 aa10.68□□□□□ -0.7
DDX41-209ENST00000508279 GSTTP1A0A1W2PQM5 241 aa10.68□□□□□ -0.7
DDX41-209ENST00000508279 FAM86B1E9PN63 330 aa10.68□□□□□ -0.7
DDX41-209ENST00000508279 MAFGO15525 162 aa10.68□□□□□ -0.7
DDX41-209ENST00000508279 TREHO43280 583 aa10.68□□□□□ -0.7
DDX41-209ENST00000508279 PFKFB2O60825 505 aa10.68□□□□□ -0.7
DDX41-209ENST00000508279 LARGE1O95461 756 aa10.68□□□□□ -0.7
DDX41-209ENST00000508279 FAM86B2P0C5J1 330 aa10.68□□□□□ -0.7
DDX41-209ENST00000508279 THPOP40225 353 aa10.68□□□□□ -0.7
DDX41-209ENST00000508279 IGBP1P78318 339 aa10.68□□□□□ -0.7
DDX41-209ENST00000508279 PTK7Q13308 1070 aa10.68□□□□□ -0.7
DDX41-209ENST00000508279 HIC1Q14526 733 aa10.68□□□□□ -0.7
DDX41-209ENST00000508279 C8orf34Q49A92 452 aa10.68□□□□□ -0.7
DDX41-209ENST00000508279 PRR16Q569H4 304 aa10.68□□□□□ -0.7
DDX41-209ENST00000508279 FAM109BQ6ICB4 259 aaPredicted RBP10.68□□□□□ -0.7
DDX41-209ENST00000508279 LRRC8DQ7L1W4 858 aa10.68□□□□□ -0.7
DDX41-209ENST00000508279 CAGE1Q8TC20 777 aa10.68□□□□□ -0.7
DDX41-209ENST00000508279 WNT8BQ93098 351 aa10.68□□□□□ -0.7
DDX41-209ENST00000508279 CTAGE1Q96RT6 745 aa10.68□□□□□ -0.7
DDX41-209ENST00000508279 RNPEPQ9H4A4 650 aa10.68□□□□□ -0.7
DDX41-209ENST00000508279 AZI2Q9H6S1 392 aa10.68□□□□□ -0.7
DDX41-209ENST00000508279 AGO4Q9HCK5 861 aaKnown RBP10.68□□□□□ -0.7
DDX41-209ENST00000508279 SH3GLB2Q9NR46 395 aa10.68□□□□□ -0.7
DDX41-209ENST00000508279 SETD4Q9NVD3 440 aa10.68□□□□□ -0.7
DDX41-209ENST00000508279 CXXC1Q9P0U4 656 aaPredicted RBP10.68□□□□□ -0.7
DDX41-209ENST00000508279 ORC3Q9UBD5 711 aaPredicted RBP10.68□□□□□ -0.7
DDX41-209ENST00000508279 TCEAL9Q9UHQ7 104 aa10.68□□□□□ -0.7
DDX41-209ENST00000508279 KCNJ14Q9UNX9 436 aa10.68□□□□□ -0.7
DDX41-209ENST00000508279 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.67□□□□□ -0.7
DDX41-209ENST00000508279 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.67□□□□□ -0.7
DDX41-209ENST00000508279 MEIS1O00470 390 aa10.67□□□□□ -0.7
DDX41-209ENST00000508279 PITPNM1O00562 1244 aa10.67□□□□□ -0.7
DDX41-209ENST00000508279 CTSHP09668 335 aa10.67□□□□□ -0.7
DDX41-209ENST00000508279 GNAT1P11488 350 aa10.67□□□□□ -0.7
DDX41-209ENST00000508279 CKBP12277 381 aa10.67□□□□□ -0.7
DDX41-209ENST00000508279 ACTN1P12814 892 aa10.67□□□□□ -0.7
DDX41-209ENST00000508279 SELPP16109 830 aa10.67□□□□□ -0.7
DDX41-209ENST00000508279 ACTR2P61160 394 aa10.67□□□□□ -0.7
DDX41-209ENST00000508279 SMAD3P84022 425 aaKnown RBP10.67□□□□□ -0.7
DDX41-209ENST00000508279 ITGB3BPQ13352 177 aaPredicted RBP10.67□□□□□ -0.7
DDX41-209ENST00000508279 ME3Q16798 604 aa10.67□□□□□ -0.7
DDX41-209ENST00000508279 ZNF618Q5T7W0 954 aa10.67□□□□□ -0.7
DDX41-209ENST00000508279 MCTP2Q6DN12 878 aa10.67□□□□□ -0.7
DDX41-209ENST00000508279 TRMT1LQ7Z2T5 733 aaKnown RBP10.67□□□□□ -0.7
DDX41-209ENST00000508279 TEX2Q8IWB9 1127 aa10.67□□□□□ -0.7
DDX41-209ENST00000508279 BLIDQ8IZY5 108 aa10.67□□□□□ -0.7
DDX41-209ENST00000508279 AFAP1L1Q8TED9 768 aa10.67□□□□□ -0.7
DDX41-209ENST00000508279 HERVK_113Q902F9 699 aa10.67□□□□□ -0.7
DDX41-209ENST00000508279 ZNF577Q9BSK1 485 aa10.67□□□□□ -0.7
DDX41-209ENST00000508279 SMARCAD1Q9H4L7 1026 aa10.67□□□□□ -0.7
DDX41-209ENST00000508279 GJB4Q9NTQ9 266 aa10.67□□□□□ -0.7
DDX41-209ENST00000508279 PCDHA4Q9UN74 947 aa10.67□□□□□ -0.7
DDX41-209ENST00000508279 SLC4A7Q9Y6M7 1214 aa10.67□□□□□ -0.7
DDX41-209ENST00000508279 EVPLQ92817 2033 aa10.67□□□□□ -0.7
DDX41-209ENST00000508279 LOXHD1Q8IVV2 1947 aa10.66□□□□□ -0.7
DDX41-209ENST00000508279 NFASCO94856 1347 aa10.66□□□□□ -0.7
DDX41-209ENST00000508279 IPO5O00410 1097 aaKnown RBP10.66□□□□□ -0.7
DDX41-209ENST00000508279 BACH1O14867 736 aa10.66□□□□□ -0.7
DDX41-209ENST00000508279 CYP3A4P08684 503 aa10.66□□□□□ -0.7
DDX41-209ENST00000508279 XBP1P17861 261 aa10.66□□□□□ -0.7
DDX41-209ENST00000508279 RFC2P35250 354 aa10.66□□□□□ -0.7
DDX41-209ENST00000508279 PBX2P40425 430 aa10.66□□□□□ -0.7
DDX41-209ENST00000508279 PPFIA1Q13136 1202 aa10.66□□□□□ -0.7
DDX41-209ENST00000508279 TBCKQ8TEA7 893 aa10.66□□□□□ -0.7
DDX41-209ENST00000508279 LMBR1Q8WVP7 490 aa10.66□□□□□ -0.7
DDX41-209ENST00000508279 ERAP1Q9NZ08 941 aa10.66□□□□□ -0.7
DDX41-209ENST00000508279 TRPC6Q9Y210 931 aa10.66□□□□□ -0.7
DDX41-209ENST00000508279 SAMM50Q9Y512 469 aa10.66□□□□□ -0.7
DDX41-209ENST00000508279 IGLV3-22A0A075B6J6 115 aa10.65□□□□□ -0.7
DDX41-209ENST00000508279 CTDNEP1O95476 244 aa10.65□□□□□ -0.7
DDX41-209ENST00000508279 PFKMP08237 780 aa10.65□□□□□ -0.7
DDX41-209ENST00000508279 DNAJB2P25686 324 aa10.65□□□□□ -0.7
DDX41-209ENST00000508279 STAT5BP51692 787 aa10.65□□□□□ -0.7
DDX41-209ENST00000508279 RABGGTBP53611 331 aa10.65□□□□□ -0.7
DDX41-209ENST00000508279 SETQ01105 290 aaPredicted RBP10.65□□□□□ -0.7
DDX41-209ENST00000508279 GRIK4Q16099 956 aa10.65□□□□□ -0.7
DDX41-209ENST00000508279 GPR153Q6NV75 609 aa10.65□□□□□ -0.7
DDX41-209ENST00000508279 NIPA1Q7RTP0 329 aa10.65□□□□□ -0.7
DDX41-209ENST00000508279 SERINC5Q86VE9 423 aa10.65□□□□□ -0.7
DDX41-209ENST00000508279 GTF3C6Q969F1 213 aa10.65□□□□□ -0.7
DDX41-209ENST00000508279 TIFAQ96CG3 184 aa10.65□□□□□ -0.7
DDX41-209ENST00000508279 ZBTB10Q96DT7 871 aa10.65□□□□□ -0.7
DDX41-209ENST00000508279 PCYT2Q99447 389 aa10.65□□□□□ -0.7
DDX41-209ENST00000508279 C22orf23Q9BZE7 217 aa10.65□□□□□ -0.7
DDX41-209ENST00000508279 MTMR10Q9NXD2 777 aa10.65□□□□□ -0.7
DDX41-209ENST00000508279 MSRAQ9UJ68 235 aa10.65□□□□□ -0.7
DDX41-209ENST00000508279 NRCAMQ92823 1304 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 STK36Q9NRP7 1315 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 CCDC194A0A1B0GVG4 234 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 RSPH10B2B2RC85 870 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 CHMP2AO43633 222 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 JAK2O60674 1132 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 NBNO60934 754 aa10.64□□□□□ -0.71
DDX41-209ENST00000508279 CCNE2O96020 404 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms