RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 MMP16P51512 607 aa9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 LAMC2Q13753 1193 aa9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 COL9A3Q14050 684 aaPredicted RBP9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 LY6KQ17RY6 165 aa9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 NBPF20Q3BBV1 942 aa9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 PSRC1Q6PGN9 363 aaPredicted RBP9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 SESTD1Q86VW0 696 aa9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 HOMER1Q86YM7 354 aa9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 PPTC7Q8NI37 304 aa9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 AFG1LQ8WV93 481 aa9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 RRP36Q96EU6 259 aaKnown RBP9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 POM121Q96HA1 1249 aa9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 SEMA6BQ9H3T3 888 aa9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 IL23AQ9NPF7 189 aa9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 ANO2Q9NQ90 1003 aa9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 CDH23Q9H251 3354 aa9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 BRWD1Q9NSI6 2320 aa9.19□□□□□ -0.94
UBE2D3-222ENST00000508238 PPFIA4O75335 1185 aa9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 CDC45O75419 566 aa9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 STAM2O75886 525 aa9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 MMP3P08254 477 aa9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 CASTP20810 708 aaKnown RBP9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 EXOSC10Q01780 885 aaKnown RBP9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 FRMPD4Q14CM0 1322 aa9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 PGM5Q15124 567 aa9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 DGKDQ16760 1214 aa9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 ZNF697Q5TEC3 545 aa9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 XRRA1Q6P2D8 792 aa9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 ZNF365Q70YC5 407 aa9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 SKAP1Q86WV1 359 aa9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 TEX2Q8IWB9 1127 aa9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 RPUSD2Q8IZ73 545 aaKnown RBP9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 SRBD1Q8N5C6 995 aaKnown RBP9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 FANCBQ8NB91 859 aa9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 HERVK_113Q902F9 699 aa9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 KAT6AQ92794 2004 aa9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 KAT2BQ92831 832 aa9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 KCNB2Q92953 911 aa9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 VWCEQ96DN2 955 aa9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 GUCD1Q96NT3 240 aa9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 PPP1R12CQ9BZL4 782 aa9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 WNT8AQ9H1J5 351 aa9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 TRMT13Q9NUP7 481 aaKnown RBP9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 SLC12A7Q9Y666 1083 aa9.18□□□□□ -0.94
UBE2D3-222ENST00000508238 UMODL1Q5DID0 1318 aa9.17□□□□□ -0.94
UBE2D3-222ENST00000508238 CCDC69A6NI79 296 aa9.17□□□□□ -0.94
UBE2D3-222ENST00000508238 S1PR4O95977 384 aa9.17□□□□□ -0.94
UBE2D3-222ENST00000508238 FGBP02675 491 aa9.17□□□□□ -0.94
UBE2D3-222ENST00000508238 PFKMP08237 780 aa9.17□□□□□ -0.94
UBE2D3-222ENST00000508238 MYCLP12524 364 aaPredicted RBP9.17□□□□□ -0.94
UBE2D3-222ENST00000508238 CCND2P30279 289 aa9.17□□□□□ -0.94
UBE2D3-222ENST00000508238 ICAM3P32942 547 aa9.17□□□□□ -0.94
UBE2D3-222ENST00000508238 KRT32Q14532 448 aa9.17□□□□□ -0.94
UBE2D3-222ENST00000508238 PTPRNQ16849 979 aa9.17□□□□□ -0.94
UBE2D3-222ENST00000508238 CELF3Q5SZQ8 465 aaKnown RBP9.17□□□□□ -0.94
UBE2D3-222ENST00000508238 NFXL1Q6ZNB6 911 aa9.17□□□□□ -0.94
UBE2D3-222ENST00000508238 DHX32Q7L7V1 743 aaKnown RBP9.17□□□□□ -0.94
UBE2D3-222ENST00000508238 FCHSD1Q86WN1 690 aa9.17□□□□□ -0.94
UBE2D3-222ENST00000508238 DHX37Q8IY37 1157 aaKnown RBP9.17□□□□□ -0.94
UBE2D3-222ENST00000508238 IL31RAQ8NI17 732 aa9.17□□□□□ -0.94
UBE2D3-222ENST00000508238 INPP4AQ96PE3 977 aaPredicted RBP9.17□□□□□ -0.94
UBE2D3-222ENST00000508238 NEK1Q96PY6 1258 aa9.17□□□□□ -0.94
UBE2D3-222ENST00000508238 MYL10Q9BUA6 226 aa9.17□□□□□ -0.94
UBE2D3-222ENST00000508238 TTYH1Q9H313 450 aaPredicted RBP9.17□□□□□ -0.94
UBE2D3-222ENST00000508238 SEC63Q9UGP8 760 aaKnown RBP9.17□□□□□ -0.94
UBE2D3-222ENST00000508238 MRVI1Q9Y6F6 885 aa9.17□□□□□ -0.94
UBE2D3-222ENST00000508238 PRRC2BQ5JSZ5 2229 aaKnown RBP9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 SPATA31C2B4DYI2 1134 aa9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 HAS3O00219 553 aa9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 MEIS2O14770 477 aa9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 PLEKHA8P1O95397 391 aa9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 F2P00734 622 aa9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 HMGB1P09429 215 aaKnown RBP9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 ACRP10323 421 aa9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 CYP2C9P11712 490 aa9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 RFC2P35250 354 aa9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 RCAN1P53805 252 aa9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 CCL23P55773 120 aa9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 MRPS9P82933 396 aaKnown RBP9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 SP2Q02086 613 aa9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 RBL2Q08999 1139 aa9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 NR6A1Q15406 480 aa9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 PCNX4Q63HM2 1172 aa9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 TMTC3Q6ZXV5 915 aa9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 FBXL16Q8N461 479 aa9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 EPS8L1Q8TE68 723 aa9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 CCDC136Q96JN2 1154 aa9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 CTAGE1Q96RT6 745 aa9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 CDX2Q99626 313 aaPredicted RBP9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 KATNAL1Q9BW62 490 aa9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 MTIF3Q9H2K0 278 aaKnown RBP9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 PSTPIP2Q9H939 334 aa9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 GDPD2Q9HCC8 539 aa9.16□□□□□ -0.94
UBE2D3-222ENST00000508238 IQCF3P0C7M6 154 aa9.15□□□□□ -0.94
UBE2D3-222ENST00000508238 UBA1P22314 1058 aaKnown RBP9.15□□□□□ -0.94
UBE2D3-222ENST00000508238 BFSP2Q13515 415 aa9.15□□□□□ -0.94
UBE2D3-222ENST00000508238 NEDD9Q14511 834 aa9.15□□□□□ -0.94
UBE2D3-222ENST00000508238 PTGISQ16647 500 aa9.15□□□□□ -0.94
UBE2D3-222ENST00000508238 HSDL1Q3SXM5 330 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms