RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 LRRC1Q9BTT6 524 aa12.06□□□□□ -0.48
LIN54-207ENST00000508171 C10orf71Q711Q0 1435 aa12.06□□□□□ -0.48
LIN54-207ENST00000508171 MMP10P09238 476 aa12.05□□□□□ -0.48
LIN54-207ENST00000508171 SPATA31C1P0DKV0 1188 aa12.05□□□□□ -0.48
LIN54-207ENST00000508171 HOXA13P31271 388 aaPredicted RBP12.05□□□□□ -0.48
LIN54-207ENST00000508171 ICA1Q05084 483 aa12.05□□□□□ -0.48
LIN54-207ENST00000508171 CCNI2Q6ZMN8 369 aaPredicted RBP12.05□□□□□ -0.48
LIN54-207ENST00000508171 PODNQ7Z5L7 613 aa12.05□□□□□ -0.48
LIN54-207ENST00000508171 DCAF4Q8WV16 495 aa12.05□□□□□ -0.48
LIN54-207ENST00000508171 LENG9Q96B70 501 aa12.05□□□□□ -0.48
LIN54-207ENST00000508171 MBOAT7Q96N66 472 aa12.05□□□□□ -0.48
LIN54-207ENST00000508171 DHX36Q9H2U1 1008 aaKnown RBP12.05□□□□□ -0.48
LIN54-207ENST00000508171 CEP72Q9P209 647 aa12.05□□□□□ -0.48
LIN54-207ENST00000508171 DMGDHQ9UI17 866 aaKnown RBP12.05□□□□□ -0.48
LIN54-207ENST00000508171 PJA2O43164 708 aa12.05□□□□□ -0.48
LIN54-207ENST00000508171 SYF2O95926 243 aaKnown RBP12.05□□□□□ -0.48
LIN54-207ENST00000508171 NAP1L1P55209 391 aaKnown RBP12.05□□□□□ -0.48
LIN54-207ENST00000508171 SLC7A5Q01650 507 aa12.05□□□□□ -0.48
LIN54-207ENST00000508171 IKQ13123 557 aaPredicted RBP12.05□□□□□ -0.48
LIN54-207ENST00000508171 MAPK8IP2Q13387 824 aaPredicted RBP12.05□□□□□ -0.48
LIN54-207ENST00000508171 SFMBT2Q5VUG0 894 aa12.05□□□□□ -0.48
LIN54-207ENST00000508171 MSL1Q68DK7 614 aa12.05□□□□□ -0.48
LIN54-207ENST00000508171 TATDN1Q6P1N9 297 aa12.05□□□□□ -0.48
LIN54-207ENST00000508171 SLC30A10Q6XR72 485 aa12.05□□□□□ -0.48
LIN54-207ENST00000508171 KRT27Q7Z3Y8 459 aa12.05□□□□□ -0.48
LIN54-207ENST00000508171 TXLNBQ8N3L3 684 aa12.05□□□□□ -0.48
LIN54-207ENST00000508171 SPATA4Q8NEY3 305 aa12.05□□□□□ -0.48
LIN54-207ENST00000508171 RIN2Q8WYP3 895 aaPredicted RBP12.05□□□□□ -0.48
LIN54-207ENST00000508171 CEP63Q96MT8 703 aa12.05□□□□□ -0.48
LIN54-207ENST00000508171 TLR10Q9BXR5 811 aa12.05□□□□□ -0.48
LIN54-207ENST00000508171 EDEM3Q9BZQ6 932 aa12.05□□□□□ -0.48
LIN54-207ENST00000508171 TMX4Q9H1E5 349 aaPredicted RBP12.05□□□□□ -0.48
LIN54-207ENST00000508171 BRWD3Q6RI45 1802 aa12.05□□□□□ -0.48
LIN54-207ENST00000508171 COL11A2P13942 1736 aaPredicted RBP12.05□□□□□ -0.48
LIN54-207ENST00000508171 SSU72P8A0A1W2PR75 194 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 HOXD13P35453 343 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 GIT2Q14161 759 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 RRP1BQ14684 758 aaKnown RBP12.04□□□□□ -0.48
LIN54-207ENST00000508171 SLC9C1Q4G0N8 1177 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 HSP90B2PQ58FF3 399 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 DACT2Q5SW24 774 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 KLHDC7AQ5VTJ3 777 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.04□□□□□ -0.48
LIN54-207ENST00000508171 SLFN12Q8IYM2 578 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 SPICE1Q8N0Z3 855 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 TBC1D5Q92609 795 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 MASTLQ96GX5 879 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 MS4A14Q96JA4 679 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 NAP1L4Q99733 375 aaKnown RBP12.04□□□□□ -0.48
LIN54-207ENST00000508171 AMNQ9BXJ7 453 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 GLT8D2Q9H1C3 349 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 HPCAL4Q9UM19 191 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 FRMD3A2A2Y4 597 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 NDUFB10O96000 172 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 ACTN1P12814 892 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 PRLRP16471 622 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 NR2F2P24468 414 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 PDE6BP35913 854 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 MARSP56192 900 aaKnown RBP12.04□□□□□ -0.48
LIN54-207ENST00000508171 CYP4A11Q02928 519 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 KCNH2Q12809 1159 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 ALS2CR12Q96Q35 445 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 REEP2Q9BRK0 252 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 IDI2Q9BXS1 227 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 TRIM34Q9BYJ4 488 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 TDRD3Q9H7E2 651 aaKnown RBP12.04□□□□□ -0.48
LIN54-207ENST00000508171 ADAMTS1Q9UHI8 967 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 ZC3H4Q9UPT8 1303 aaKnown RBP12.04□□□□□ -0.48
LIN54-207ENST00000508171 A0A087X0T9 212 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 RSPH10B2B2RC85 870 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 RBAK-RBAKDNI3L0D1 243 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 OPLAHO14841 1288 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 SERPING1P05155 500 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 FAM228BP0C875 321 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 RSPH10BP0C881 870 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 MCM3P25205 808 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 HOXA7P31268 230 aaPredicted RBP12.04□□□□□ -0.48
LIN54-207ENST00000508171 RAPGEF1Q13905 1077 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 ABCB5Q2M3G0 1257 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 TAF3Q5VWG9 929 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 FBXO11Q86XK2 927 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 MMGT1Q8N4V1 131 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 FAM133AQ8N9E0 248 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 FAM71BQ8TC56 605 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.04□□□□□ -0.48
LIN54-207ENST00000508171 SELENOOQ9BVL4 669 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 PSD3Q9NYI0 1048 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 CALCOCO1Q9P1Z2 691 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 DNM3Q9UQ16 869 aa12.04□□□□□ -0.48
LIN54-207ENST00000508171 ATAD5Q96QE3 1844 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 ECE2O60344 883 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 PRPF6O94906 941 aaKnown RBP12.03□□□□□ -0.48
LIN54-207ENST00000508171 GNA14O95837 355 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 SLC9A1P19634 815 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 KLRC1P26715 233 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 RPA1P27694 616 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 HSPA1LP34931 641 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 DNA2P51530 1060 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 AP3B2Q13367 1082 aa12.03□□□□□ -0.48
LIN54-207ENST00000508171 MAP9Q49MG5 647 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms