RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 USP17L21D6R901 530 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 GCOM1H8Y6P7 765 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 CHUKO15111 745 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 ZNF185O15231 689 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 COBLO75128 1261 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 MOCS3O95396 460 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 FAM107AO95990 144 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 TFRCP02786 760 aaKnown RBP5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 CCDC172P0C7W6 258 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 MYZAPP0CAP1 466 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 MYBL2P10244 700 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 PLCG1P19174 1290 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 NR1D1P20393 614 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 HNRNPH1P31943 449 aaKnown RBP5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 LSP1P33241 339 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 HSPA9P38646 679 aaKnown RBP5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 MDH1P40925 334 aaKnown RBP5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 MATR3P43243 847 aaKnown RBP eCLIP5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 PMS1P54277 932 aaKnown RBP5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 GSCP56915 257 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 CYP27A1Q02318 531 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 SKIV2LQ15477 1246 aaKnown RBP5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 NAB2Q15742 525 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 PPP2R5EQ16537 467 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 CDC37Q16543 378 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 PTGISQ16647 500 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 QPCTQ16769 361 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 TDRD12Q587J7 1177 aaKnown RBP5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 NAALADL2Q58DX5 795 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 MIIPQ5JXC2 388 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 SPDYCQ5MJ68 293 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 AGBL2Q5U5Z8 902 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 SFMBT2Q5VUG0 894 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 ANKRD40Q6AI12 368 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 UNC13DQ70J99 1090 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 RRAGAQ7L523 313 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 NEK8Q86SG6 692 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 FMNL3Q8IVF7 1028 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 GSPT2Q8IYD1 628 aaKnown RBP5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 IQCKQ8N0W5 287 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 SYNE4Q8N205 404 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 GIMAP7Q8NHV1 300 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 SNIP1Q8TAD8 396 aaKnown RBP5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 RIN2Q8WYP3 895 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 SHISA4Q96DD7 197 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 CALR3Q96L12 384 aaKnown RBP5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 MRGPRX2Q96LB1 330 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 CEP63Q96MT8 703 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 CCDC43Q96MW1 224 aaKnown RBP5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 NAP1L4Q99733 375 aaKnown RBP5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 UNC93B1Q9H1C4 597 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 MMRN2Q9H8L6 949 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 CNOT10Q9H9A5 744 aaKnown RBP5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 PLCB1Q9NQ66 1216 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 TOR4AQ9NXH8 423 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 BARHL2Q9NY43 387 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 SEC63Q9UGP8 760 aaKnown RBP5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 DMGDHQ9UI17 866 aaKnown RBP5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 ASAP1Q9ULH1 1129 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 PCDHA6Q9UN73 950 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 SIK3Q9Y2K2 1263 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 PCDHA8Q9Y5H6 950 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 CAPN7Q9Y6W3 813 aa5.46□□□□□ -1.54
HMGB3P16-201ENST00000508037 MYH13Q9UKX3 1938 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 hCG_1642624A0A1W2PR95 340 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 ESYT2A0FGR8 921 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 LRRC53A6NM62 1247 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 CCDC188H7C350 402 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 M0R2N6 131 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 HEXIM1O94992 359 aaKnown RBP5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 ADAMTS2O95450 1211 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 SLC8A1P32418 973 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 EPS15P42566 896 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 SMTNP53814 917 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 EIF3BP55884 814 aaKnown RBP5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 GSTO1P78417 241 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 FKBP3Q00688 224 aaKnown RBP5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 GUCY2DQ02846 1103 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 ACTN3Q08043 901 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 NEDD9Q14511 834 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 PDIA5Q14554 519 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 INF2Q27J81 1249 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 NBPF9Q3BBW0 867 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 CCDC40Q4G0X9 1142 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 TTMPQ5BVD1 217 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 SH3D19Q5HYK7 790 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 RNF187Q5TA31 235 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 NAA35Q5VZE5 725 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 NFRKBQ6P4R8 1299 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 HEATR3Q7Z4Q2 680 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 MAATS1Q7Z4T9 603 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 VPS36Q86VN1 386 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 NLRP14Q86W24 1093 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 SYCE1Q8N0S2 351 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 PNMA1Q8ND90 353 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 CCDC26Q8TAB7 109 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 MAGEC3Q8TD91 643 aa5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 ZNF473Q8WTR7 871 aaKnown RBP5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 RRP36Q96EU6 259 aaKnown RBP5.45□□□□□ -1.54
HMGB3P16-201ENST00000508037 GDAP1L1Q96MZ0 367 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms