RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 Q7L0L9 218 aa16.09■□□□□ 0.17
CCHCR1-222ENST00000507459 NIPA1Q7RTP0 329 aa16.09■□□□□ 0.17
CCHCR1-222ENST00000507459 OTOP2Q7RTS6 562 aa16.09■□□□□ 0.17
CCHCR1-222ENST00000507459 BLIDQ8IZY5 108 aa16.09■□□□□ 0.17
CCHCR1-222ENST00000507459 CAGE1Q8TC20 777 aa16.09■□□□□ 0.17
CCHCR1-222ENST00000507459 DHX38Q92620 1227 aaKnown RBP16.09■□□□□ 0.17
CCHCR1-222ENST00000507459 ATP6V0A1Q93050 837 aa16.09■□□□□ 0.17
CCHCR1-222ENST00000507459 GTF3C6Q969F1 213 aa16.09■□□□□ 0.17
CCHCR1-222ENST00000507459 C22orf23Q9BZE7 217 aa16.09■□□□□ 0.17
CCHCR1-222ENST00000507459 SETD4Q9NVD3 440 aa16.09■□□□□ 0.17
CCHCR1-222ENST00000507459 ORC3Q9UBD5 711 aaPredicted RBP16.09■□□□□ 0.17
CCHCR1-222ENST00000507459 LAMA2P24043 3122 aaKnown RBP16.08■□□□□ 0.17
CCHCR1-222ENST00000507459 IGLV3-22A0A075B6J6 115 aa16.08■□□□□ 0.16
CCHCR1-222ENST00000507459 XBP1P17861 261 aa16.08■□□□□ 0.16
CCHCR1-222ENST00000507459 ACTR2P61160 394 aa16.08■□□□□ 0.16
CCHCR1-222ENST00000507459 PTK7Q13308 1070 aa16.08■□□□□ 0.16
CCHCR1-222ENST00000507459 AFAP1L1Q8TED9 768 aa16.08■□□□□ 0.16
CCHCR1-222ENST00000507459 WNT8BQ93098 351 aa16.08■□□□□ 0.16
CCHCR1-222ENST00000507459 ZNF577Q9BSK1 485 aa16.08■□□□□ 0.16
CCHCR1-222ENST00000507459 FTOQ9C0B1 505 aaKnown RBP eCLIP16.08■□□□□ 0.16
CCHCR1-222ENST00000507459 SMARCAD1Q9H4L7 1026 aa16.08■□□□□ 0.16
CCHCR1-222ENST00000507459 GJB4Q9NTQ9 266 aa16.08■□□□□ 0.16
CCHCR1-222ENST00000507459 NFASCO94856 1347 aa16.08■□□□□ 0.16
CCHCR1-222ENST00000507459 STK36Q9NRP7 1315 aa16.08■□□□□ 0.16
CCHCR1-222ENST00000507459 IPO5O00410 1097 aaKnown RBP16.07■□□□□ 0.16
CCHCR1-222ENST00000507459 TREHO43280 583 aa16.07■□□□□ 0.16
CCHCR1-222ENST00000507459 CKBP12277 381 aa16.07■□□□□ 0.16
CCHCR1-222ENST00000507459 SELPP16109 830 aa16.07■□□□□ 0.16
CCHCR1-222ENST00000507459 GALNT17Q6IS24 598 aa16.07■□□□□ 0.16
CCHCR1-222ENST00000507459 DEFB123Q8N688 67 aa16.07■□□□□ 0.16
CCHCR1-222ENST00000507459 TBCKQ8TEA7 893 aa16.07■□□□□ 0.16
CCHCR1-222ENST00000507459 HERVK_113Q902F9 699 aa16.07■□□□□ 0.16
CCHCR1-222ENST00000507459 AZI2Q9H6S1 392 aa16.07■□□□□ 0.16
CCHCR1-222ENST00000507459 ERAP1Q9NZ08 941 aa16.07■□□□□ 0.16
CCHCR1-222ENST00000507459 CXXC1Q9P0U4 656 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-222ENST00000507459 SCN5AQ14524 2016 aa16.07■□□□□ 0.16
CCHCR1-222ENST00000507459 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.06■□□□□ 0.16
CCHCR1-222ENST00000507459 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.06■□□□□ 0.16
CCHCR1-222ENST00000507459 ZBBXA8MT70 800 aa16.06■□□□□ 0.16
CCHCR1-222ENST00000507459 GRXCR1A8MXD5 290 aa16.06■□□□□ 0.16
CCHCR1-222ENST00000507459 GNAT1P11488 350 aa16.06■□□□□ 0.16
CCHCR1-222ENST00000507459 CIITAP33076 1130 aa16.06■□□□□ 0.16
CCHCR1-222ENST00000507459 RFC2P35250 354 aa16.06■□□□□ 0.16
CCHCR1-222ENST00000507459 THPOP40225 353 aa16.06■□□□□ 0.16
CCHCR1-222ENST00000507459 SETQ01105 290 aaPredicted RBP16.06■□□□□ 0.16
CCHCR1-222ENST00000507459 NPY5RQ15761 445 aa16.06■□□□□ 0.16
CCHCR1-222ENST00000507459 FAM109BQ6ICB4 259 aaPredicted RBP16.06■□□□□ 0.16
CCHCR1-222ENST00000507459 GPR153Q6NV75 609 aa16.06■□□□□ 0.16
CCHCR1-222ENST00000507459 LRRC8DQ7L1W4 858 aa16.06■□□□□ 0.16
CCHCR1-222ENST00000507459 SERINC5Q86VE9 423 aa16.06■□□□□ 0.16
CCHCR1-222ENST00000507459 DAGLBQ8NCG7 672 aa16.06■□□□□ 0.16
CCHCR1-222ENST00000507459 NSUN7Q8NE18 718 aaKnown RBP16.06■□□□□ 0.16
CCHCR1-222ENST00000507459 WASF1Q92558 559 aa16.06■□□□□ 0.16
CCHCR1-222ENST00000507459 VWCEQ96DN2 955 aa16.06■□□□□ 0.16
CCHCR1-222ENST00000507459 FAM161BQ96MY7 647 aa16.06■□□□□ 0.16
CCHCR1-222ENST00000507459 PCYT2Q99447 389 aa16.06■□□□□ 0.16
CCHCR1-222ENST00000507459 KIF2CQ99661 725 aa16.06■□□□□ 0.16
CCHCR1-222ENST00000507459 PHF20Q9BVI0 1012 aa16.06■□□□□ 0.16
CCHCR1-222ENST00000507459 MTIF3Q9H2K0 278 aaKnown RBP16.06■□□□□ 0.16
CCHCR1-222ENST00000507459 LIMCH1Q9UPQ0 1083 aa16.06■□□□□ 0.16
CCHCR1-222ENST00000507459 RBAK-RBAKDNI3L0D1 243 aa16.05■□□□□ 0.16
CCHCR1-222ENST00000507459 M0R2N6 131 aa16.05■□□□□ 0.16
CCHCR1-222ENST00000507459 BACH1O14867 736 aa16.05■□□□□ 0.16
CCHCR1-222ENST00000507459 DHX15O43143 795 aaKnown RBP16.05■□□□□ 0.16
CCHCR1-222ENST00000507459 EDIL3O43854 480 aa16.05■□□□□ 0.16
CCHCR1-222ENST00000507459 JAK2O60674 1132 aa16.05■□□□□ 0.16
CCHCR1-222ENST00000507459 LGR5O75473 907 aa16.05■□□□□ 0.16
CCHCR1-222ENST00000507459 CCNE2O96020 404 aa16.05■□□□□ 0.16
CCHCR1-222ENST00000507459 PFKMP08237 780 aa16.05■□□□□ 0.16
CCHCR1-222ENST00000507459 FDPSP14324 419 aaKnown RBP16.05■□□□□ 0.16
CCHCR1-222ENST00000507459 STAT5BP51692 787 aa16.05■□□□□ 0.16
CCHCR1-222ENST00000507459 USP11P51784 963 aa16.05■□□□□ 0.16
CCHCR1-222ENST00000507459 FOSBP53539 338 aa16.05■□□□□ 0.16
CCHCR1-222ENST00000507459 IGBP1P78318 339 aa16.05■□□□□ 0.16
CCHCR1-222ENST00000507459 SMAD3P84022 425 aaKnown RBP16.05■□□□□ 0.16
CCHCR1-222ENST00000507459 PPFIA1Q13136 1202 aa16.05■□□□□ 0.16
CCHCR1-222ENST00000507459 TRIM71Q2Q1W2 868 aaKnown RBP16.05■□□□□ 0.16
CCHCR1-222ENST00000507459 ZNF618Q5T7W0 954 aa16.05■□□□□ 0.16
CCHCR1-222ENST00000507459 RASIP1Q5U651 963 aa16.05■□□□□ 0.16
CCHCR1-222ENST00000507459 FAM177A1Q8N128 213 aaPredicted RBP16.05■□□□□ 0.16
CCHCR1-222ENST00000507459 LMBR1Q8WVP7 490 aa16.05■□□□□ 0.16
CCHCR1-222ENST00000507459 KAT6AQ92794 2004 aa16.04■□□□□ 0.16
CCHCR1-222ENST00000507459 EMSYQ7Z589 1322 aa16.04■□□□□ 0.16
CCHCR1-222ENST00000507459 NRCAMQ92823 1304 aa16.04■□□□□ 0.16
CCHCR1-222ENST00000507459 CCDC194A0A1B0GVG4 234 aa16.04■□□□□ 0.16
CCHCR1-222ENST00000507459 ACTN1P12814 892 aa16.04■□□□□ 0.16
CCHCR1-222ENST00000507459 HOXC8P31273 242 aa16.04■□□□□ 0.16
CCHCR1-222ENST00000507459 RBL2Q08999 1139 aa16.04■□□□□ 0.16
CCHCR1-222ENST00000507459 NONOQ15233 471 aaKnown RBP eCLIP16.04■□□□□ 0.16
CCHCR1-222ENST00000507459 GRIK4Q16099 956 aa16.04■□□□□ 0.16
CCHCR1-222ENST00000507459 INF2Q27J81 1249 aa16.04■□□□□ 0.16
CCHCR1-222ENST00000507459 ZNF697Q5TEC3 545 aa16.04■□□□□ 0.16
CCHCR1-222ENST00000507459 KRT25Q7Z3Z0 450 aa16.04■□□□□ 0.16
CCHCR1-222ENST00000507459 CCDC83Q8IWF9 413 aa16.04■□□□□ 0.16
CCHCR1-222ENST00000507459 OXER1Q8TDS5 423 aa16.04■□□□□ 0.16
CCHCR1-222ENST00000507459 LENG9Q96B70 501 aa16.04■□□□□ 0.16
CCHCR1-222ENST00000507459 UPF2Q9HAU5 1272 aaKnown RBP16.04■□□□□ 0.16
CCHCR1-222ENST00000507459 TBC1D22BQ9NU19 505 aa16.04■□□□□ 0.16
CCHCR1-222ENST00000507459 TCEAL9Q9UHQ7 104 aa16.04■□□□□ 0.16
CCHCR1-222ENST00000507459 TRPC6Q9Y210 931 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms