RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 ABHD14A-ACY1A0A1B0GW23 586 aa16.49■□□□□ 0.23
CDC42SE2-209ENST00000506419 LGR5O75473 907 aa16.49■□□□□ 0.23
CDC42SE2-209ENST00000506419 ARP10275 920 aa16.49■□□□□ 0.23
CDC42SE2-209ENST00000506419 TCF7P36402 384 aaPredicted RBP16.49■□□□□ 0.23
CDC42SE2-209ENST00000506419 KCNJ6P48051 423 aa16.49■□□□□ 0.23
CDC42SE2-209ENST00000506419 MKRN4PQ13434 485 aaPredicted RBP16.49■□□□□ 0.23
CDC42SE2-209ENST00000506419 MTMR1Q13613 665 aa16.49■□□□□ 0.23
CDC42SE2-209ENST00000506419 IKBKEQ14164 716 aa16.49■□□□□ 0.23
CDC42SE2-209ENST00000506419 BRF1Q92994 677 aa16.49■□□□□ 0.23
CDC42SE2-209ENST00000506419 CDHR1Q96JP9 859 aa16.49■□□□□ 0.23
CDC42SE2-209ENST00000506419 PCYT2Q99447 389 aa16.49■□□□□ 0.23
CDC42SE2-209ENST00000506419 KIF28PB7ZC32 967 aa16.48■□□□□ 0.23
CDC42SE2-209ENST00000506419 MAFGO15525 162 aa16.48■□□□□ 0.23
CDC42SE2-209ENST00000506419 TLL1O43897 1013 aa16.48■□□□□ 0.23
CDC42SE2-209ENST00000506419 CLK2P49760 499 aaKnown RBP16.48■□□□□ 0.23
CDC42SE2-209ENST00000506419 RCAN1P53805 252 aa16.48■□□□□ 0.23
CDC42SE2-209ENST00000506419 ARHGAP4P98171 946 aa16.48■□□□□ 0.23
CDC42SE2-209ENST00000506419 PKN1Q16512 942 aa16.48■□□□□ 0.23
CDC42SE2-209ENST00000506419 PLEKHG4Q58EX7 1191 aa16.48■□□□□ 0.23
CDC42SE2-209ENST00000506419 FBXL16Q8N461 479 aa16.48■□□□□ 0.23
CDC42SE2-209ENST00000506419 LMBR1Q8WVP7 490 aa16.48■□□□□ 0.23
CDC42SE2-209ENST00000506419 KCNH7Q9NS40 1196 aa16.48■□□□□ 0.23
CDC42SE2-209ENST00000506419 NAP1L2Q9ULW6 460 aaPredicted RBP16.48■□□□□ 0.23
CDC42SE2-209ENST00000506419 REV3LO60673 3130 aa16.47■□□□□ 0.23
CDC42SE2-209ENST00000506419 MEIS1O00470 390 aa16.47■□□□□ 0.23
CDC42SE2-209ENST00000506419 FOSP01100 380 aaPredicted RBP16.47■□□□□ 0.23
CDC42SE2-209ENST00000506419 GNAT1P11488 350 aa16.47■□□□□ 0.23
CDC42SE2-209ENST00000506419 POU3F3P20264 500 aaPredicted RBP16.47■□□□□ 0.23
CDC42SE2-209ENST00000506419 RPS6KB1P23443 525 aa16.47■□□□□ 0.23
CDC42SE2-209ENST00000506419 METAP2P50579 478 aaKnown RBP eCLIP16.47■□□□□ 0.23
CDC42SE2-209ENST00000506419 ADCY7P51828 1080 aa16.47■□□□□ 0.23
CDC42SE2-209ENST00000506419 PFKFB3Q16875 520 aaPredicted RBP16.47■□□□□ 0.23
CDC42SE2-209ENST00000506419 KRT40Q6A162 431 aa16.47■□□□□ 0.23
CDC42SE2-209ENST00000506419 PPP1R18Q6NYC8 613 aa16.47■□□□□ 0.23
CDC42SE2-209ENST00000506419 BLOC1S2Q6QNY1 142 aa16.47■□□□□ 0.23
CDC42SE2-209ENST00000506419 RUFY4Q6ZNE9 571 aa16.47■□□□□ 0.23
CDC42SE2-209ENST00000506419 ARNTL2Q8WYA1 636 aa16.47■□□□□ 0.23
CDC42SE2-209ENST00000506419 ANO3Q9BYT9 981 aa16.47■□□□□ 0.23
CDC42SE2-209ENST00000506419 AGXT2Q9BYV1 514 aa16.47■□□□□ 0.23
CDC42SE2-209ENST00000506419 ZNF215Q9UL58 517 aaPredicted RBP16.47■□□□□ 0.23
CDC42SE2-209ENST00000506419 MTCH2Q9Y6C9 303 aa16.47■□□□□ 0.23
CDC42SE2-209ENST00000506419 TRANK1O15050 2925 aa16.47■□□□□ 0.23
CDC42SE2-209ENST00000506419 NRCAMQ92823 1304 aa16.46■□□□□ 0.23
CDC42SE2-209ENST00000506419 XIRP2A4UGR9 3374 aa16.46■□□□□ 0.23
CDC42SE2-209ENST00000506419 PPFIA3O75145 1194 aa16.46■□□□□ 0.23
CDC42SE2-209ENST00000506419 GJB5O95377 273 aa16.46■□□□□ 0.23
CDC42SE2-209ENST00000506419 CHRNA1P02708 482 aa16.46■□□□□ 0.23
CDC42SE2-209ENST00000506419 CTSHP09668 335 aa16.46■□□□□ 0.23
CDC42SE2-209ENST00000506419 MARK3P27448 753 aa16.46■□□□□ 0.23
CDC42SE2-209ENST00000506419 FGD1P98174 961 aa16.46■□□□□ 0.23
CDC42SE2-209ENST00000506419 ITGB3BPQ13352 177 aaPredicted RBP16.46■□□□□ 0.23
CDC42SE2-209ENST00000506419 CEP55Q53EZ4 464 aa16.46■□□□□ 0.23
CDC42SE2-209ENST00000506419 FAM26DQ5JW98 314 aa16.46■□□□□ 0.23
CDC42SE2-209ENST00000506419 MARCH8Q5T0T0 291 aa16.46■□□□□ 0.23
CDC42SE2-209ENST00000506419 JAKMIP3Q5VZ66 844 aa16.46■□□□□ 0.23
CDC42SE2-209ENST00000506419 FAM117BQ6P1L5 589 aa16.46■□□□□ 0.23
CDC42SE2-209ENST00000506419 ZBTB10Q96DT7 871 aa16.46■□□□□ 0.23
CDC42SE2-209ENST00000506419 RAD9AQ99638 391 aa16.46■□□□□ 0.23
CDC42SE2-209ENST00000506419 ZBED2Q9BTP6 218 aa16.46■□□□□ 0.23
CDC42SE2-209ENST00000506419 AGO4Q9HCK5 861 aaKnown RBP16.46■□□□□ 0.23
CDC42SE2-209ENST00000506419 PRPF3O43395 683 aaKnown RBP16.45■□□□□ 0.22
CDC42SE2-209ENST00000506419 LPXNO60711 386 aa16.45■□□□□ 0.22
CDC42SE2-209ENST00000506419 SREBF1P36956 1147 aa16.45■□□□□ 0.22
CDC42SE2-209ENST00000506419 NTRK3Q16288 839 aa16.45■□□□□ 0.22
CDC42SE2-209ENST00000506419 TEX2Q8IWB9 1127 aa16.45■□□□□ 0.22
CDC42SE2-209ENST00000506419 GLG1Q92896 1179 aa16.45■□□□□ 0.22
CDC42SE2-209ENST00000506419 PHKBQ93100 1093 aa16.45■□□□□ 0.22
CDC42SE2-209ENST00000506419 SMARCAD1Q9H4L7 1026 aa16.45■□□□□ 0.22
CDC42SE2-209ENST00000506419 EHMT1Q9H9B1 1298 aa16.45■□□□□ 0.22
CDC42SE2-209ENST00000506419 ERAP1Q9NZ08 941 aa16.45■□□□□ 0.22
CDC42SE2-209ENST00000506419 EMSYQ7Z589 1322 aa16.45■□□□□ 0.22
CDC42SE2-209ENST00000506419 TTC28Q96AY4 2481 aa16.44■□□□□ 0.22
CDC42SE2-209ENST00000506419 GBF1Q92538 1859 aa16.44■□□□□ 0.22
CDC42SE2-209ENST00000506419 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.44■□□□□ 0.22
CDC42SE2-209ENST00000506419 hCG_1984214I3L0E3 225 aa16.44■□□□□ 0.22
CDC42SE2-209ENST00000506419 EFCAB14O75071 495 aa16.44■□□□□ 0.22
CDC42SE2-209ENST00000506419 CAND2O75155 1236 aa16.44■□□□□ 0.22
CDC42SE2-209ENST00000506419 SCG2P13521 617 aa16.44■□□□□ 0.22
CDC42SE2-209ENST00000506419 PDIA3P30101 505 aaKnown RBP16.44■□□□□ 0.22
CDC42SE2-209ENST00000506419 EVCP57679 992 aa16.44■□□□□ 0.22
CDC42SE2-209ENST00000506419 PPFIA1Q13136 1202 aa16.44■□□□□ 0.22
CDC42SE2-209ENST00000506419 GRB10Q13322 594 aa16.44■□□□□ 0.22
CDC42SE2-209ENST00000506419 GRIK4Q16099 956 aa16.44■□□□□ 0.22
CDC42SE2-209ENST00000506419 RPAINQ86UA6 219 aa16.44■□□□□ 0.22
CDC42SE2-209ENST00000506419 ZNF713Q8N859 430 aaPredicted RBP16.44■□□□□ 0.22
CDC42SE2-209ENST00000506419 CRYGNQ8WXF5 182 aa16.44■□□□□ 0.22
CDC42SE2-209ENST00000506419 UIMC1Q96RL1 719 aa16.44■□□□□ 0.22
CDC42SE2-209ENST00000506419 JPH1Q9HDC5 661 aaPredicted RBP16.44■□□□□ 0.22
CDC42SE2-209ENST00000506419 SLC9A2Q9UBY0 812 aa16.44■□□□□ 0.22
CDC42SE2-209ENST00000506419 NFASCO94856 1347 aa16.44■□□□□ 0.22
CDC42SE2-209ENST00000506419 CCDC196A0A1B0GTZ2 297 aa16.43■□□□□ 0.22
CDC42SE2-209ENST00000506419 MBLAC1A4D2B0 266 aaPredicted RBP16.43■□□□□ 0.22
CDC42SE2-209ENST00000506419 LINC01553A4QN01 128 aa16.43■□□□□ 0.22
CDC42SE2-209ENST00000506419 FAM86B1E9PN63 330 aa16.43■□□□□ 0.22
CDC42SE2-209ENST00000506419 DHX15O43143 795 aaKnown RBP16.43■□□□□ 0.22
CDC42SE2-209ENST00000506419 EDIL3O43854 480 aa16.43■□□□□ 0.22
CDC42SE2-209ENST00000506419 ATG7O95352 703 aa16.43■□□□□ 0.22
CDC42SE2-209ENST00000506419 FAM86B2P0C5J1 330 aa16.43■□□□□ 0.22
CDC42SE2-209ENST00000506419 INSRRP14616 1297 aa16.43■□□□□ 0.22
CDC42SE2-209ENST00000506419 ACTR2P61160 394 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms