RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 PCDHA4Q9UN74 947 aa17.69■□□□□ 0.42
MED28-204ENST00000506409 TANC1Q9C0D5 1861 aa17.69■□□□□ 0.42
MED28-204ENST00000506409 STK36Q9NRP7 1315 aa17.69■□□□□ 0.42
MED28-204ENST00000506409 IGLV3-22A0A075B6J6 115 aa17.68■□□□□ 0.42
MED28-204ENST00000506409 SELPP16109 830 aa17.68■□□□□ 0.42
MED28-204ENST00000506409 HOXC8P31273 242 aa17.68■□□□□ 0.42
MED28-204ENST00000506409 SETQ01105 290 aaPredicted RBP17.68■□□□□ 0.42
MED28-204ENST00000506409 RBL2Q08999 1139 aa17.68■□□□□ 0.42
MED28-204ENST00000506409 ME3Q16798 604 aa17.68■□□□□ 0.42
MED28-204ENST00000506409 RASIP1Q5U651 963 aa17.68■□□□□ 0.42
MED28-204ENST00000506409 Q7L0L9 218 aa17.68■□□□□ 0.42
MED28-204ENST00000506409 OTOP2Q7RTS6 562 aa17.68■□□□□ 0.42
MED28-204ENST00000506409 NECAB1Q8N987 351 aa17.68■□□□□ 0.42
MED28-204ENST00000506409 HERVK_113Q902F9 699 aa17.68■□□□□ 0.42
MED28-204ENST00000506409 GLG1Q92896 1179 aa17.68■□□□□ 0.42
MED28-204ENST00000506409 ATP6V0A1Q93050 837 aa17.68■□□□□ 0.42
MED28-204ENST00000506409 RNPEPQ9H4A4 650 aa17.68■□□□□ 0.42
MED28-204ENST00000506409 ERAP1Q9NZ08 941 aa17.68■□□□□ 0.42
MED28-204ENST00000506409 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.67■□□□□ 0.42
MED28-204ENST00000506409 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.67■□□□□ 0.42
MED28-204ENST00000506409 LARGE1O95461 756 aa17.67■□□□□ 0.42
MED28-204ENST00000506409 GNAT1P11488 350 aa17.67■□□□□ 0.42
MED28-204ENST00000506409 CKBP12277 381 aa17.67■□□□□ 0.42
MED28-204ENST00000506409 MARK3P27448 753 aa17.67■□□□□ 0.42
MED28-204ENST00000506409 ACTR2P61160 394 aa17.67■□□□□ 0.42
MED28-204ENST00000506409 GALNT17Q6IS24 598 aa17.67■□□□□ 0.42
MED28-204ENST00000506409 LRRC8DQ7L1W4 858 aa17.67■□□□□ 0.42
MED28-204ENST00000506409 SERINC5Q86VE9 423 aa17.67■□□□□ 0.42
MED28-204ENST00000506409 BLIDQ8IZY5 108 aa17.67■□□□□ 0.42
MED28-204ENST00000506409 WNT8BQ93098 351 aa17.67■□□□□ 0.42
MED28-204ENST00000506409 GTF3C6Q969F1 213 aa17.67■□□□□ 0.42
MED28-204ENST00000506409 VWCEQ96DN2 955 aa17.67■□□□□ 0.42
MED28-204ENST00000506409 C22orf23Q9BZE7 217 aa17.67■□□□□ 0.42
MED28-204ENST00000506409 SMARCAD1Q9H4L7 1026 aa17.67■□□□□ 0.42
MED28-204ENST00000506409 SETD4Q9NVD3 440 aa17.67■□□□□ 0.42
MED28-204ENST00000506409 CXXC1Q9P0U4 656 aaPredicted RBP17.67■□□□□ 0.42
MED28-204ENST00000506409 TRIP12Q14669 1992 aaPredicted RBP17.67■□□□□ 0.42
MED28-204ENST00000506409 EMSYQ7Z589 1322 aa17.67■□□□□ 0.42
MED28-204ENST00000506409 SCN5AQ14524 2016 aa17.66■□□□□ 0.42
MED28-204ENST00000506409 DDX39AO00148 427 aaKnown RBP17.66■□□□□ 0.42
MED28-204ENST00000506409 IPO5O00410 1097 aaKnown RBP17.66■□□□□ 0.42
MED28-204ENST00000506409 TREHO43280 583 aa17.66■□□□□ 0.42
MED28-204ENST00000506409 DTNBO60941 627 aa17.66■□□□□ 0.42
MED28-204ENST00000506409 CTDNEP1O95476 244 aa17.66■□□□□ 0.42
MED28-204ENST00000506409 XBP1P17861 261 aa17.66■□□□□ 0.42
MED28-204ENST00000506409 CIITAP33076 1130 aa17.66■□□□□ 0.42
MED28-204ENST00000506409 TRIM71Q2Q1W2 868 aaKnown RBP17.66■□□□□ 0.42
MED28-204ENST00000506409 PRR16Q569H4 304 aa17.66■□□□□ 0.42
MED28-204ENST00000506409 FAM109BQ6ICB4 259 aaPredicted RBP17.66■□□□□ 0.42
MED28-204ENST00000506409 DAGLBQ8NCG7 672 aa17.66■□□□□ 0.42
MED28-204ENST00000506409 ZNF577Q9BSK1 485 aa17.66■□□□□ 0.42
MED28-204ENST00000506409 FTOQ9C0B1 505 aaKnown RBP eCLIP17.66■□□□□ 0.42
MED28-204ENST00000506409 AZI2Q9H6S1 392 aa17.66■□□□□ 0.42
MED28-204ENST00000506409 ORC3Q9UBD5 711 aaPredicted RBP17.66■□□□□ 0.42
MED28-204ENST00000506409 KCNJ14Q9UNX9 436 aa17.66■□□□□ 0.42
MED28-204ENST00000506409 LGR5O75473 907 aa17.65■□□□□ 0.42
MED28-204ENST00000506409 PARNO95453 639 aaKnown RBP17.65■□□□□ 0.42
MED28-204ENST00000506409 ACTN1P12814 892 aa17.65■□□□□ 0.42
MED28-204ENST00000506409 THPOP40225 353 aa17.65■□□□□ 0.42
MED28-204ENST00000506409 USP11P51784 963 aa17.65■□□□□ 0.42
MED28-204ENST00000506409 NPY5RQ15761 445 aa17.65■□□□□ 0.42
MED28-204ENST00000506409 ZNF697Q5TEC3 545 aa17.65■□□□□ 0.42
MED28-204ENST00000506409 TBCKQ8TEA7 893 aa17.65■□□□□ 0.42
MED28-204ENST00000506409 LMBR1Q8WVP7 490 aa17.65■□□□□ 0.42
MED28-204ENST00000506409 WASF1Q92558 559 aa17.65■□□□□ 0.42
MED28-204ENST00000506409 UIMC1Q96RL1 719 aa17.65■□□□□ 0.42
MED28-204ENST00000506409 NRCAMQ92823 1304 aa17.65■□□□□ 0.42
MED28-204ENST00000506409 ZBBXA8MT70 800 aa17.64■□□□□ 0.41
MED28-204ENST00000506409 M0R2N6 131 aa17.64■□□□□ 0.41
MED28-204ENST00000506409 DHX15O43143 795 aaKnown RBP17.64■□□□□ 0.41
MED28-204ENST00000506409 CCNE2O96020 404 aa17.64■□□□□ 0.41
MED28-204ENST00000506409 PPFIA1Q13136 1202 aa17.64■□□□□ 0.41
MED28-204ENST00000506409 ZNF618Q5T7W0 954 aa17.64■□□□□ 0.41
MED28-204ENST00000506409 PCYT2Q99447 389 aa17.64■□□□□ 0.41
MED28-204ENST00000506409 PHF20Q9BVI0 1012 aa17.64■□□□□ 0.41
MED28-204ENST00000506409 TBC1D22BQ9NU19 505 aa17.64■□□□□ 0.41
MED28-204ENST00000506409 MTMR10Q9NXD2 777 aa17.64■□□□□ 0.41
MED28-204ENST00000506409 SLC4A7Q9Y6M7 1214 aa17.64■□□□□ 0.41
MED28-204ENST00000506409 GRXCR1A8MXD5 290 aa17.63■□□□□ 0.41
MED28-204ENST00000506409 ATG7O95352 703 aa17.63■□□□□ 0.41
MED28-204ENST00000506409 DNAJB2P25686 324 aa17.63■□□□□ 0.41
MED28-204ENST00000506409 STAT5BP51692 787 aa17.63■□□□□ 0.41
MED28-204ENST00000506409 ADAM17P78536 824 aa17.63■□□□□ 0.41
MED28-204ENST00000506409 GPNMBQ14956 572 aa17.63■□□□□ 0.41
MED28-204ENST00000506409 GRIK4Q16099 956 aa17.63■□□□□ 0.41
MED28-204ENST00000506409 TRAF7Q6Q0C0 670 aa17.63■□□□□ 0.41
MED28-204ENST00000506409 KRT25Q7Z3Z0 450 aa17.63■□□□□ 0.41
MED28-204ENST00000506409 LENG9Q96B70 501 aa17.63■□□□□ 0.41
MED28-204ENST00000506409 FAM161BQ96MY7 647 aa17.63■□□□□ 0.41
MED28-204ENST00000506409 GJB4Q9NTQ9 266 aa17.63■□□□□ 0.41
MED28-204ENST00000506409 TCEAL9Q9UHQ7 104 aa17.63■□□□□ 0.41
MED28-204ENST00000506409 BACH1O14867 736 aa17.62■□□□□ 0.41
MED28-204ENST00000506409 EDIL3O43854 480 aa17.62■□□□□ 0.41
MED28-204ENST00000506409 NBNO60934 754 aa17.62■□□□□ 0.41
MED28-204ENST00000506409 CAND2O75155 1236 aa17.62■□□□□ 0.41
MED28-204ENST00000506409 FDPSP14324 419 aaKnown RBP17.62■□□□□ 0.41
MED28-204ENST00000506409 NONOQ15233 471 aaKnown RBP eCLIP17.62■□□□□ 0.41
MED28-204ENST00000506409 MIS18BP1Q6P0N0 1132 aa17.62■□□□□ 0.41
MED28-204ENST00000506409 PLPPR4Q7Z2D5 763 aa17.62■□□□□ 0.41
MED28-204ENST00000506409 NSUN7Q8NE18 718 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms