RNA–Protein interactions for RNA: ENST00000505496.6

CTSB-205, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-205ENST00000505496 MSH4O15457 936 aa9.89□□□□□ -0.83
CTSB-205ENST00000505496 RAG1P15918 1043 aa9.89□□□□□ -0.83
CTSB-205ENST00000505496 KRT2P35908 639 aa9.89□□□□□ -0.83
CTSB-205ENST00000505496 ACTR2P61160 394 aa9.89□□□□□ -0.83
CTSB-205ENST00000505496 ADAM17P78536 824 aa9.89□□□□□ -0.83
CTSB-205ENST00000505496 MDM2Q00987 491 aaPredicted RBP9.89□□□□□ -0.83
CTSB-205ENST00000505496 NR5A1Q13285 461 aa9.89□□□□□ -0.83
CTSB-205ENST00000505496 HIC1Q14526 733 aa9.89□□□□□ -0.83
CTSB-205ENST00000505496 INF2Q27J81 1249 aa9.89□□□□□ -0.83
CTSB-205ENST00000505496 HABP4Q5JVS0 413 aaKnown RBP9.89□□□□□ -0.83
CTSB-205ENST00000505496 GDF6Q6KF10 455 aaPredicted RBP9.89□□□□□ -0.83
CTSB-205ENST00000505496 MFSD5Q6N075 450 aa9.89□□□□□ -0.83
CTSB-205ENST00000505496 ZNF746Q6NUN9 644 aaPredicted RBP9.89□□□□□ -0.83
CTSB-205ENST00000505496 B3GNT9Q6UX72 402 aa9.89□□□□□ -0.83
CTSB-205ENST00000505496 ABHD15Q6UXT9 468 aa9.89□□□□□ -0.83
CTSB-205ENST00000505496 PLPPR4Q7Z2D5 763 aa9.89□□□□□ -0.83
CTSB-205ENST00000505496 TRIM50Q86XT4 487 aa9.89□□□□□ -0.83
CTSB-205ENST00000505496 C7orf31Q8N865 590 aa9.89□□□□□ -0.83
CTSB-205ENST00000505496 FBXO18Q8NFZ0 1043 aa9.89□□□□□ -0.83
CTSB-205ENST00000505496 ETNPPLQ8TBG4 499 aa9.89□□□□□ -0.83
CTSB-205ENST00000505496 SLC5A5Q92911 643 aa9.89□□□□□ -0.83
CTSB-205ENST00000505496 PCYT2Q99447 389 aa9.89□□□□□ -0.83
CTSB-205ENST00000505496 RIT2Q99578 217 aa9.89□□□□□ -0.83
CTSB-205ENST00000505496 LBHD1Q9BQE6 289 aaPredicted RBP9.89□□□□□ -0.83
CTSB-205ENST00000505496 SDF4Q9BRK5 362 aa9.89□□□□□ -0.83
CTSB-205ENST00000505496 ZNF577Q9BSK1 485 aa9.89□□□□□ -0.83
CTSB-205ENST00000505496 PKD2L1Q9P0L9 805 aa9.89□□□□□ -0.83
CTSB-205ENST00000505496 HDAC6Q9UBN7 1215 aa9.89□□□□□ -0.83
CTSB-205ENST00000505496 ZNF215Q9UL58 517 aaPredicted RBP9.89□□□□□ -0.83
CTSB-205ENST00000505496 BTBD18B2RXH4 712 aa9.88□□□□□ -0.83
CTSB-205ENST00000505496 TDP2O95551 362 aa9.88□□□□□ -0.83
CTSB-205ENST00000505496 SMIM10L2AP0DMW4 78 aa9.88□□□□□ -0.83
CTSB-205ENST00000505496 SMIM10L2BP0DMW5 78 aa9.88□□□□□ -0.83
CTSB-205ENST00000505496 GCFC2P16383 781 aaKnown RBP9.88□□□□□ -0.83
CTSB-205ENST00000505496 KRT76Q01546 638 aa9.88□□□□□ -0.83
CTSB-205ENST00000505496 SP4Q02446 784 aa9.88□□□□□ -0.83
CTSB-205ENST00000505496 CUL4AQ13619 759 aa9.88□□□□□ -0.83
CTSB-205ENST00000505496 PTGISQ16647 500 aa9.88□□□□□ -0.83
CTSB-205ENST00000505496 PIK3AP1Q6ZUJ8 805 aa9.88□□□□□ -0.83
CTSB-205ENST00000505496 NEK8Q86SG6 692 aa9.88□□□□□ -0.83
CTSB-205ENST00000505496 SMAP1Q8IYB5 467 aaPredicted RBP9.88□□□□□ -0.83
CTSB-205ENST00000505496 DIS3L2Q8IYB7 885 aaKnown RBP9.88□□□□□ -0.83
CTSB-205ENST00000505496 AFAP1L1Q8TED9 768 aa9.88□□□□□ -0.83
CTSB-205ENST00000505496 PPP1R13LQ8WUF5 828 aa9.88□□□□□ -0.83
CTSB-205ENST00000505496 DHX38Q92620 1227 aaKnown RBP9.88□□□□□ -0.83
CTSB-205ENST00000505496 VWCEQ96DN2 955 aa9.88□□□□□ -0.83
CTSB-205ENST00000505496 C8orf76Q96K31 380 aa9.88□□□□□ -0.83
CTSB-205ENST00000505496 NAP1L4Q99733 375 aaKnown RBP9.88□□□□□ -0.83
CTSB-205ENST00000505496 HIPK3Q9H422 1215 aa9.88□□□□□ -0.83
CTSB-205ENST00000505496 RNPEPQ9H4A4 650 aa9.88□□□□□ -0.83
CTSB-205ENST00000505496 SMARCAD1Q9H4L7 1026 aa9.88□□□□□ -0.83
CTSB-205ENST00000505496 BRMS1Q9HCU9 246 aa9.88□□□□□ -0.83
CTSB-205ENST00000505496 KCNMB3Q9NPA1 279 aa9.88□□□□□ -0.83
CTSB-205ENST00000505496 ERAP1Q9NZ08 941 aa9.88□□□□□ -0.83
CTSB-205ENST00000505496 UMODL1Q5DID0 1318 aa9.87□□□□□ -0.83
CTSB-205ENST00000505496 LTBP2Q14767 1821 aa9.87□□□□□ -0.83
CTSB-205ENST00000505496 MBLAC1A4D2B0 266 aaPredicted RBP9.87□□□□□ -0.83
CTSB-205ENST00000505496 FAM205CA6NFA0 338 aa9.87□□□□□ -0.83
CTSB-205ENST00000505496 TBX3O15119 743 aa9.87□□□□□ -0.83
CTSB-205ENST00000505496 SLC37A4O43826 429 aa9.87□□□□□ -0.83
CTSB-205ENST00000505496 PSMD10O75832 226 aa9.87□□□□□ -0.83
CTSB-205ENST00000505496 CYP2C9P11712 490 aa9.87□□□□□ -0.83
CTSB-205ENST00000505496 CYP2C18P33260 490 aa9.87□□□□□ -0.83
CTSB-205ENST00000505496 SLC26A2P50443 739 aa9.87□□□□□ -0.83
CTSB-205ENST00000505496 EPHB4P54760 987 aa9.87□□□□□ -0.83
CTSB-205ENST00000505496 FPGSQ05932 587 aa9.87□□□□□ -0.83
CTSB-205ENST00000505496 PTK7Q13308 1070 aa9.87□□□□□ -0.83
CTSB-205ENST00000505496 TRIM29Q14134 588 aa9.87□□□□□ -0.83
CTSB-205ENST00000505496 TRIM71Q2Q1W2 868 aaKnown RBP9.87□□□□□ -0.83
CTSB-205ENST00000505496 FAM47CQ5HY64 1035 aa9.87□□□□□ -0.83
CTSB-205ENST00000505496 C16orf59Q7L2K0 433 aa9.87□□□□□ -0.83
CTSB-205ENST00000505496 SERINC5Q86VE9 423 aa9.87□□□□□ -0.83
CTSB-205ENST00000505496 TDHQ8IZJ6 230 aa9.87□□□□□ -0.83
CTSB-205ENST00000505496 CAGE1Q8TC20 777 aa9.87□□□□□ -0.83
CTSB-205ENST00000505496 UBE2OQ9C0C9 1292 aaKnown RBP9.87□□□□□ -0.83
CTSB-205ENST00000505496 WNT8AQ9H1J5 351 aa9.87□□□□□ -0.83
CTSB-205ENST00000505496 FOXP1Q9H334 677 aaPredicted RBP9.87□□□□□ -0.83
CTSB-205ENST00000505496 DDX25Q9UHL0 483 aaKnown RBP9.87□□□□□ -0.83
CTSB-205ENST00000505496 NRCAMQ92823 1304 aa9.86□□□□□ -0.83
CTSB-205ENST00000505496 MYH7BA7E2Y1 1941 aa9.86□□□□□ -0.83
CTSB-205ENST00000505496 C17orf102A2RUQ5 167 aa9.86□□□□□ -0.83
CTSB-205ENST00000505496 GNAT1P11488 350 aa9.86□□□□□ -0.83
CTSB-205ENST00000505496 CSF2RAP15509 400 aa9.86□□□□□ -0.83
CTSB-205ENST00000505496 U2AF2P26368 475 aaKnown RBP eCLIP9.86□□□□□ -0.83
CTSB-205ENST00000505496 STAT5BP51692 787 aa9.86□□□□□ -0.83
CTSB-205ENST00000505496 ZNF200P98182 395 aaPredicted RBP9.86□□□□□ -0.83
CTSB-205ENST00000505496 PPIGQ13427 754 aaKnown RBP eCLIP9.86□□□□□ -0.832e-12■□□□□ 8.5
CTSB-205ENST00000505496 BFSP2Q13515 415 aa9.86□□□□□ -0.83
CTSB-205ENST00000505496 SAFBQ15424 915 aaKnown RBP eCLIP9.86□□□□□ -0.83
CTSB-205ENST00000505496 LETM2Q2VYF4 491 aa9.86□□□□□ -0.83
CTSB-205ENST00000505496 LRIT3Q3SXY7 679 aa9.86□□□□□ -0.83
CTSB-205ENST00000505496 UTP14CQ5TAP6 766 aaKnown RBP9.86□□□□□ -0.83
CTSB-205ENST00000505496 RASIP1Q5U651 963 aa9.86□□□□□ -0.83
CTSB-205ENST00000505496 TRAF7Q6Q0C0 670 aa9.86□□□□□ -0.83
CTSB-205ENST00000505496 RPAINQ86UA6 219 aa9.86□□□□□ -0.83
CTSB-205ENST00000505496 CCDC60Q8IWA6 550 aaPredicted RBP9.86□□□□□ -0.83
CTSB-205ENST00000505496 TMEM199Q8N511 208 aa9.86□□□□□ -0.83
CTSB-205ENST00000505496 FAM184AQ8NB25 1140 aa9.86□□□□□ -0.83
CTSB-205ENST00000505496 RDM1Q8NG50 284 aa9.86□□□□□ -0.83
CTSB-205ENST00000505496 LMBR1Q8WVP7 490 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms