RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 HAUS3Q68CZ6 603 aa11.56□□□□□ -0.56
RFC1-210ENST00000505077 B3GNT9Q6UX72 402 aa11.56□□□□□ -0.56
RFC1-210ENST00000505077 KCTD17Q8N5Z5 321 aa11.56□□□□□ -0.56
RFC1-210ENST00000505077 PPTC7Q8NI37 304 aa11.56□□□□□ -0.56
RFC1-210ENST00000505077 ERMNQ8TAM6 284 aa11.56□□□□□ -0.56
RFC1-210ENST00000505077 NEK9Q8TD19 979 aa11.56□□□□□ -0.56
RFC1-210ENST00000505077 ARMC5Q96C12 935 aa11.56□□□□□ -0.56
RFC1-210ENST00000505077 PDGFCQ9NRA1 345 aa11.56□□□□□ -0.56
RFC1-210ENST00000505077 TFIP11Q9UBB9 837 aaKnown RBP11.56□□□□□ -0.56
RFC1-210ENST00000505077 FBXO2Q9UK22 296 aaPredicted RBP11.56□□□□□ -0.56
RFC1-210ENST00000505077 VWA3AA6NCI4 1184 aa11.55□□□□□ -0.56
RFC1-210ENST00000505077 NOP56O00567 594 aaKnown RBP11.55□□□□□ -0.56
RFC1-210ENST00000505077 ATP9AO75110 1047 aa11.55□□□□□ -0.56
RFC1-210ENST00000505077 HOXD8P13378 290 aaPredicted RBP11.55□□□□□ -0.56
RFC1-210ENST00000505077 SMPD1P17405 629 aa11.55□□□□□ -0.56
RFC1-210ENST00000505077 MUTP22033 750 aa11.55□□□□□ -0.56
RFC1-210ENST00000505077 TXLNAP40222 546 aa11.55□□□□□ -0.56
RFC1-210ENST00000505077 CPT1AP50416 773 aa11.55□□□□□ -0.56
RFC1-210ENST00000505077 ARHGAP1Q07960 439 aa11.55□□□□□ -0.56
RFC1-210ENST00000505077 LY6KQ17RY6 165 aa11.55□□□□□ -0.56
RFC1-210ENST00000505077 CYFIP1Q7L576 1253 aa11.55□□□□□ -0.56
RFC1-210ENST00000505077 TLK2Q86UE8 772 aa11.55□□□□□ -0.56
RFC1-210ENST00000505077 DHX37Q8IY37 1157 aaKnown RBP11.55□□□□□ -0.56
RFC1-210ENST00000505077 TRPV1Q8NER1 839 aa11.55□□□□□ -0.56
RFC1-210ENST00000505077 ZFP91Q96JP5 570 aaPredicted RBP11.55□□□□□ -0.56
RFC1-210ENST00000505077 UPF3AQ9H1J1 476 aaKnown RBP11.55□□□□□ -0.56
RFC1-210ENST00000505077 MLXIPQ9HAP2 919 aa11.55□□□□□ -0.56
RFC1-210ENST00000505077 SPC25Q9HBM1 224 aa11.55□□□□□ -0.56
RFC1-210ENST00000505077 GNEQ9Y223 722 aaKnown RBP11.55□□□□□ -0.56
RFC1-210ENST00000505077 EMSYQ7Z589 1322 aa11.55□□□□□ -0.56
RFC1-210ENST00000505077 KDM3AQ9Y4C1 1321 aa11.55□□□□□ -0.56
RFC1-210ENST00000505077 A0A1W2PQ27 194 aa11.54□□□□□ -0.56
RFC1-210ENST00000505077 A0A1W2PQ64 194 aa11.54□□□□□ -0.56
RFC1-210ENST00000505077 A0A1W2PQD8 194 aa11.54□□□□□ -0.56
RFC1-210ENST00000505077 DKC1O60832 514 aaKnown RBP eCLIP11.54□□□□□ -0.56
RFC1-210ENST00000505077 MARCKSP29966 332 aaPredicted RBP11.54□□□□□ -0.56
RFC1-210ENST00000505077 CNGA1P29973 690 aa11.54□□□□□ -0.56
RFC1-210ENST00000505077 CCND3P30281 292 aaPredicted RBP11.54□□□□□ -0.56
RFC1-210ENST00000505077 TRIM32Q13049 653 aa11.54□□□□□ -0.56
RFC1-210ENST00000505077 PRAMEF19Q5SWL8 479 aa11.54□□□□□ -0.56
RFC1-210ENST00000505077 ADALQ6DHV7 355 aa11.54□□□□□ -0.56
RFC1-210ENST00000505077 MIS18BP1Q6P0N0 1132 aa11.54□□□□□ -0.56
RFC1-210ENST00000505077 OR6J1Q8NGC5 347 aa11.54□□□□□ -0.56
RFC1-210ENST00000505077 ZNF333Q96JL9 665 aa11.54□□□□□ -0.56
RFC1-210ENST00000505077 SPATA33Q96N06 139 aa11.54□□□□□ -0.56
RFC1-210ENST00000505077 PYM1Q9BRP8 204 aaKnown RBP11.54□□□□□ -0.56
RFC1-210ENST00000505077 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.54□□□□□ -0.56
RFC1-210ENST00000505077 AP5M1Q9H0R1 490 aa11.54□□□□□ -0.56
RFC1-210ENST00000505077 UNC45AQ9H3U1 944 aa11.54□□□□□ -0.56
RFC1-210ENST00000505077 PAK6Q9NQU5 681 aaPredicted RBP11.54□□□□□ -0.56
RFC1-210ENST00000505077 PKD2L1Q9P0L9 805 aa11.54□□□□□ -0.56
RFC1-210ENST00000505077 LRWD1Q9UFC0 647 aa11.54□□□□□ -0.56
RFC1-210ENST00000505077 DDX20Q9UHI6 824 aaKnown RBP11.54□□□□□ -0.56
RFC1-210ENST00000505077 PCDHA10Q9Y5I2 948 aa11.54□□□□□ -0.56
RFC1-210ENST00000505077 SYNRGQ9UMZ2 1314 aa11.54□□□□□ -0.56
RFC1-210ENST00000505077 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.53□□□□□ -0.56
RFC1-210ENST00000505077 GOLGA6L4A6NEF3 574 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 POTEMA6NI47 508 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 A6NJR5 290 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 ADCY6O43306 1168 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 KPNA6O60684 536 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 PPFIA4O75335 1185 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 ATG7O95352 703 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 CCNE2O96020 404 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 PSAPP07602 524 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 PTMSP20962 102 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 CST5P28325 142 aaPredicted RBP11.53□□□□□ -0.56
RFC1-210ENST00000505077 UBA7P41226 1012 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 TECP42680 631 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 SLC26A2P50443 739 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 GJA9P57773 515 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 ACTR2P61160 394 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 IL17AQ16552 155 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 AXDND1Q5T1B0 1012 aaPredicted RBP11.53□□□□□ -0.56
RFC1-210ENST00000505077 KRT79Q5XKE5 535 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 MIER3Q7Z3K6 550 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 SH3TC2Q8TF17 1288 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 ATP6V0A1Q93050 837 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 TUFT1Q9NNX1 390 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 XPNPEP3Q9NQH7 507 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 DISC1Q9NRI5 854 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 PCDHA7Q9UN72 937 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 SAMM50Q9Y512 469 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 IGSF9BQ9UPX0 1349 aa11.53□□□□□ -0.56
RFC1-210ENST00000505077 IGKV6D-21A0A0A0MT36 114 aa11.52□□□□□ -0.57
RFC1-210ENST00000505077 DDX11L8A8MPP1 907 aa11.52□□□□□ -0.57
RFC1-210ENST00000505077 DDX39AO00148 427 aaKnown RBP11.52□□□□□ -0.57
RFC1-210ENST00000505077 CHMP2AO43633 222 aa11.52□□□□□ -0.57
RFC1-210ENST00000505077 ZEB2O60315 1214 aa11.52□□□□□ -0.57
RFC1-210ENST00000505077 LGR5O75473 907 aa11.52□□□□□ -0.57
RFC1-210ENST00000505077 MMP3P08254 477 aa11.52□□□□□ -0.57
RFC1-210ENST00000505077 SUPT20HL2P0C7V6 817 aa11.52□□□□□ -0.57
RFC1-210ENST00000505077 CHRM1P11229 460 aaPredicted RBP11.52□□□□□ -0.57
RFC1-210ENST00000505077 CMA1P23946 247 aa11.52□□□□□ -0.57
RFC1-210ENST00000505077 RPA1P27694 616 aa11.52□□□□□ -0.57
RFC1-210ENST00000505077 EPHA7Q15375 998 aa11.52□□□□□ -0.57
RFC1-210ENST00000505077 FSCN1Q16658 493 aaKnown RBP11.52□□□□□ -0.57
RFC1-210ENST00000505077 DGKDQ16760 1214 aa11.52□□□□□ -0.57
RFC1-210ENST00000505077 FAM160B1Q5W0V3 765 aa11.52□□□□□ -0.57
RFC1-210ENST00000505077 RESP18Q5W5W9 173 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms