RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 KCNH7Q9NS40 1196 aa28.95■■■□□ 2.22
PVT1-201ENST00000504719 CXCL10P02778 98 aa28.94■■■□□ 2.22
PVT1-201ENST00000504719 TCF7P36402 384 aaPredicted RBP28.94■■■□□ 2.22
PVT1-201ENST00000504719 AKAP17AQ02040 695 aaKnown RBP28.94■■■□□ 2.22
PVT1-201ENST00000504719 GRIN2CQ14957 1233 aa28.94■■■□□ 2.22
PVT1-201ENST00000504719 CEP55Q53EZ4 464 aa28.94■■■□□ 2.22
PVT1-201ENST00000504719 ZNF618Q5T7W0 954 aa28.94■■■□□ 2.22
PVT1-201ENST00000504719 JAKMIP3Q5VZ66 844 aa28.94■■■□□ 2.22
PVT1-201ENST00000504719 NCOA5Q9HCD5 579 aaKnown RBP28.94■■■□□ 2.22
PVT1-201ENST00000504719 TREHO43280 583 aa28.93■■■□□ 2.22
PVT1-201ENST00000504719 NBNO60934 754 aa28.93■■■□□ 2.22
PVT1-201ENST00000504719 ATP2A2P16615 1042 aaKnown RBP28.93■■■□□ 2.22
PVT1-201ENST00000504719 ZNF274Q96GC6 653 aaPredicted RBP28.93■■■□□ 2.22
PVT1-201ENST00000504719 SLC26A6Q9BXS9 759 aa28.93■■■□□ 2.22
PVT1-201ENST00000504719 C6orf50Q9HD87 102 aa28.93■■■□□ 2.22
PVT1-201ENST00000504719 YBX2Q9Y2T7 364 aaKnown RBP28.93■■■□□ 2.22
PVT1-201ENST00000504719 ADAMTS3O15072 1205 aa28.92■■■□□ 2.22
PVT1-201ENST00000504719 PPFIA3O75145 1194 aa28.92■■■□□ 2.22
PVT1-201ENST00000504719 ARP10275 920 aa28.92■■■□□ 2.22
PVT1-201ENST00000504719 RABGGTBP53611 331 aa28.92■■■□□ 2.22
PVT1-201ENST00000504719 NKX2-4Q9H2Z4 354 aa28.92■■■□□ 2.22
PVT1-201ENST00000504719 SETD4Q9NVD3 440 aa28.92■■■□□ 2.22
PVT1-201ENST00000504719 CDH23Q9H251 3354 aa28.92■■■□□ 2.22
PVT1-201ENST00000504719 NFASCO94856 1347 aa28.92■■■□□ 2.22
PVT1-201ENST00000504719 MYO9BQ13459 2157 aa28.91■■■□□ 2.22
PVT1-201ENST00000504719 PTPRSQ13332 1948 aa28.91■■■□□ 2.22
PVT1-201ENST00000504719 MEIS1O00470 390 aa28.91■■■□□ 2.22
PVT1-201ENST00000504719 BAIAP3O94812 1187 aa28.91■■■□□ 2.22
PVT1-201ENST00000504719 GNAT1P11488 350 aa28.91■■■□□ 2.22
PVT1-201ENST00000504719 ARHGAP4P98171 946 aa28.91■■■□□ 2.22
PVT1-201ENST00000504719 SLC17A8Q8NDX2 589 aa28.91■■■□□ 2.22
PVT1-201ENST00000504719 PHOSPHO2Q8TCD6 241 aa28.91■■■□□ 2.22
PVT1-201ENST00000504719 SLC9A7Q96T83 725 aa28.91■■■□□ 2.22
PVT1-201ENST00000504719 JPH1Q9HDC5 661 aaPredicted RBP28.91■■■□□ 2.22
PVT1-201ENST00000504719 SLC9A2Q9UBY0 812 aa28.91■■■□□ 2.22
PVT1-201ENST00000504719 PCDHA11Q9Y5I1 949 aa28.91■■■□□ 2.22
PVT1-201ENST00000504719 GNA11P29992 359 aa28.9■■■□□ 2.22
PVT1-201ENST00000504719 ZNF76P36508 570 aa28.9■■■□□ 2.22
PVT1-201ENST00000504719 THPOP40225 353 aa28.9■■■□□ 2.22
PVT1-201ENST00000504719 ADAM17P78536 824 aa28.9■■■□□ 2.22
PVT1-201ENST00000504719 MCTP2Q6DN12 878 aa28.9■■■□□ 2.22
PVT1-201ENST00000504719 CNKSR3Q6P9H4 555 aa28.9■■■□□ 2.22
PVT1-201ENST00000504719 NIPA1Q7RTP0 329 aa28.9■■■□□ 2.22
PVT1-201ENST00000504719 CRYGNQ8WXF5 182 aa28.9■■■□□ 2.22
PVT1-201ENST00000504719 AGO4Q9HCK5 861 aaKnown RBP28.9■■■□□ 2.22
PVT1-201ENST00000504719 CYP3A4P08684 503 aa28.89■■■□□ 2.22
PVT1-201ENST00000504719 MBTPS1Q14703 1052 aa28.89■■■□□ 2.22
PVT1-201ENST00000504719 REXO1Q8N1G1 1221 aaKnown RBP28.89■■■□□ 2.22
PVT1-201ENST00000504719 SDF4Q9BRK5 362 aa28.89■■■□□ 2.22
PVT1-201ENST00000504719 SMARCAD1Q9H4L7 1026 aa28.89■■■□□ 2.22
PVT1-201ENST00000504719 ERAP1Q9NZ08 941 aa28.89■■■□□ 2.22
PVT1-201ENST00000504719 NRCAMQ92823 1304 aa28.89■■■□□ 2.21
PVT1-201ENST00000504719 LGR5O75473 907 aa28.88■■■□□ 2.21
PVT1-201ENST00000504719 MYOGP15173 224 aa28.88■■■□□ 2.21
PVT1-201ENST00000504719 FOSL2P15408 326 aa28.88■■■□□ 2.21
PVT1-201ENST00000504719 AK2P54819 239 aa28.88■■■□□ 2.21
PVT1-201ENST00000504719 STK3Q13188 491 aa28.88■■■□□ 2.21
PVT1-201ENST00000504719 ITGB3BPQ13352 177 aaPredicted RBP28.88■■■□□ 2.21
PVT1-201ENST00000504719 CCDC148Q8NFR7 591 aa28.88■■■□□ 2.21
PVT1-201ENST00000504719 LMBR1Q8WVP7 490 aa28.88■■■□□ 2.21
PVT1-201ENST00000504719 C22orf23Q9BZE7 217 aa28.88■■■□□ 2.21
PVT1-201ENST00000504719 SLC28A3Q9HAS3 691 aa28.88■■■□□ 2.21
PVT1-201ENST00000504719 EMSYQ7Z589 1322 aa28.88■■■□□ 2.21
PVT1-201ENST00000504719 RSPH10B2B2RC85 870 aa28.87■■■□□ 2.21
PVT1-201ENST00000504719 FAM86B1E9PN63 330 aa28.87■■■□□ 2.21
PVT1-201ENST00000504719 FAM86B2P0C5J1 330 aa28.87■■■□□ 2.21
PVT1-201ENST00000504719 RSPH10BP0C881 870 aa28.87■■■□□ 2.21
PVT1-201ENST00000504719 NEK4P51957 841 aa28.87■■■□□ 2.21
PVT1-201ENST00000504719 SSRP1Q08945 709 aaKnown RBP28.87■■■□□ 2.21
PVT1-201ENST00000504719 TCTN1Q2MV58 587 aa28.87■■■□□ 2.21
PVT1-201ENST00000504719 BICD2Q8TD16 824 aa28.87■■■□□ 2.21
PVT1-201ENST00000504719 GLG1Q92896 1179 aa28.87■■■□□ 2.21
PVT1-201ENST00000504719 PCYT2Q99447 389 aa28.87■■■□□ 2.21
PVT1-201ENST00000504719 SH3GLB2Q9NR46 395 aa28.87■■■□□ 2.21
PVT1-201ENST00000504719 VPS54Q9P1Q0 977 aa28.87■■■□□ 2.21
PVT1-201ENST00000504719 CAND2O75155 1236 aa28.86■■■□□ 2.21
PVT1-201ENST00000504719 ANKRD1Q15327 319 aa28.86■■■□□ 2.21
PVT1-201ENST00000504719 PLA2G4DQ86XP0 818 aa28.86■■■□□ 2.21
PVT1-201ENST00000504719 TRIM22Q8IYM9 498 aa28.86■■■□□ 2.21
PVT1-201ENST00000504719 TPCN1Q9ULQ1 816 aa28.86■■■□□ 2.21
PVT1-201ENST00000504719 IGLV3-22A0A075B6J6 115 aa28.85■■■□□ 2.21
PVT1-201ENST00000504719 MARK3P27448 753 aa28.85■■■□□ 2.21
PVT1-201ENST00000504719 KCNJ6P48051 423 aa28.85■■■□□ 2.21
PVT1-201ENST00000504719 ACTR2P61160 394 aa28.85■■■□□ 2.21
PVT1-201ENST00000504719 WDR5P61964 334 aaKnown RBP28.85■■■□□ 2.21
PVT1-201ENST00000504719 HERC6Q8IVU3 1022 aa28.85■■■□□ 2.21
PVT1-201ENST00000504719 MAFAQ8NHW3 353 aaPredicted RBP28.85■■■□□ 2.21
PVT1-201ENST00000504719 RASGRP4Q8TDF6 673 aa28.85■■■□□ 2.21
PVT1-201ENST00000504719 ABHD14A-ACY1A0A1B0GW23 586 aa28.84■■■□□ 2.21
PVT1-201ENST00000504719 CPLX1O14810 134 aa28.84■■■□□ 2.21
PVT1-201ENST00000504719 ATG7O95352 703 aa28.84■■■□□ 2.21
PVT1-201ENST00000504719 PPFIA1Q13136 1202 aa28.84■■■□□ 2.21
PVT1-201ENST00000504719 PRDM12Q9H4Q4 367 aa28.84■■■□□ 2.21
PVT1-201ENST00000504719 MICAL3Q7RTP6 2002 aa28.83■■■□□ 2.21
PVT1-201ENST00000504719 RBAK-RBAKDNI3L0D1 243 aa28.83■■■□□ 2.21
PVT1-201ENST00000504719 GRIK4Q16099 956 aa28.83■■■□□ 2.21
PVT1-201ENST00000504719 AZI2Q9H6S1 392 aa28.83■■■□□ 2.21
PVT1-201ENST00000504719 DEXIO95424 95 aa28.82■■■□□ 2.2
PVT1-201ENST00000504719 RBM25P49756 843 aaKnown RBP28.82■■■□□ 2.2
PVT1-201ENST00000504719 IKBKEQ14164 716 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms