RNA–Protein interactions for RNA: ENST00000504487.5

CCDC149-204, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC149, Length 3,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-204ENST00000504487 MFSD14BQ5SR56 506 aa9.4□□□□□ -0.9
CCDC149-204ENST00000504487 WLSQ5T9L3 541 aa9.4□□□□□ -0.9
CCDC149-204ENST00000504487 STAG2Q8N3U4 1231 aa9.4□□□□□ -0.9
CCDC149-204ENST00000504487 FAM133AQ8N9E0 248 aa9.4□□□□□ -0.9
CCDC149-204ENST00000504487 PARD3BQ8TEW8 1205 aa9.4□□□□□ -0.9
CCDC149-204ENST00000504487 MTMR8Q96EF0 704 aa9.4□□□□□ -0.9
CCDC149-204ENST00000504487 TLR10Q9BXR5 811 aa9.4□□□□□ -0.9
CCDC149-204ENST00000504487 TBC1D7Q9P0N9 293 aa9.4□□□□□ -0.9
CCDC149-204ENST00000504487 PLAGL2Q9UPG8 496 aa9.4□□□□□ -0.9
CCDC149-204ENST00000504487 ATF5Q9Y2D1 282 aaPredicted RBP9.4□□□□□ -0.9
CCDC149-204ENST00000504487 SLIT1O75093 1534 aa9.4□□□□□ -0.9
CCDC149-204ENST00000504487 SPDYE3A6NKU9 549 aa9.4□□□□□ -0.91
CCDC149-204ENST00000504487 H0Y3Z8 333 aa9.4□□□□□ -0.91
CCDC149-204ENST00000504487 SNUPNO95149 360 aaKnown RBP9.4□□□□□ -0.91
CCDC149-204ENST00000504487 ATP2A2P16615 1042 aaKnown RBP9.4□□□□□ -0.91
CCDC149-204ENST00000504487 TRADDQ15628 312 aa9.4□□□□□ -0.91
CCDC149-204ENST00000504487 ZYXQ15942 572 aaKnown RBP9.4□□□□□ -0.91
CCDC149-204ENST00000504487 EARS2Q5JPH6 523 aaKnown RBP9.4□□□□□ -0.91
CCDC149-204ENST00000504487 SH3RF1Q7Z6J0 888 aa9.4□□□□□ -0.91
CCDC149-204ENST00000504487 KSR1Q8IVT5 923 aa9.4□□□□□ -0.91
CCDC149-204ENST00000504487 NELFCDQ8IXH7 590 aa9.4□□□□□ -0.91
CCDC149-204ENST00000504487 ZSCAN10Q96SZ4 725 aaPredicted RBP9.4□□□□□ -0.91
CCDC149-204ENST00000504487 RAB34Q9BZG1 259 aa9.4□□□□□ -0.91
CCDC149-204ENST00000504487 FAM114A2Q9NRY5 505 aa9.4□□□□□ -0.91
CCDC149-204ENST00000504487 GGA2Q9UJY4 613 aa9.4□□□□□ -0.91
CCDC149-204ENST00000504487 ZC3H4Q9UPT8 1303 aaKnown RBP9.39□□□□□ -0.91
CCDC149-204ENST00000504487 PRPF3O43395 683 aaKnown RBP9.39□□□□□ -0.91
CCDC149-204ENST00000504487 CCNT1O60563 726 aaKnown RBP9.39□□□□□ -0.91
CCDC149-204ENST00000504487 MMP10P09238 476 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 TRAPPC10P48553 1259 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 EIF3BP55884 814 aaKnown RBP9.39□□□□□ -0.91
CCDC149-204ENST00000504487 MEA1Q16626 185 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 KCTD19Q17RG1 926 aaPredicted RBP9.39□□□□□ -0.91
CCDC149-204ENST00000504487 MAEAQ7L5Y9 396 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 C3orf20Q8ND61 904 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 HPS3Q969F9 1004 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 KDM4CQ9H3R0 1056 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 GOLPH3Q9H4A6 298 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 MLXIPLQ9NP71 852 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 GJA3Q9Y6H8 435 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 UBR1Q8IWV7 1749 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 MROH5Q6ZUA9 1318 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 CCDC189A1A4V9 331 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 GRID2IPA4D2P6 1211 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 TMEM110-MUSTN1A8MSY1 372 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 FCER1AP12319 257 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 STX2P32856 288 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 TECP42680 631 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 PDE6CP51160 858 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 PRKG1Q13976 671 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 LRRC14Q15048 493 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 LRRC41Q15345 812 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 THEMIS2Q5TEJ8 643 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 NEK9Q8TD19 979 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 RBM17Q96I25 401 aaKnown RBP9.39□□□□□ -0.91
CCDC149-204ENST00000504487 FAXDC2Q96IV6 333 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 RAB3IPQ96QF0 476 aaPredicted RBP9.39□□□□□ -0.91
CCDC149-204ENST00000504487 ANKRD2Q9GZV1 360 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 DBNDD1Q9H9R9 158 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 NKIRAS1Q9NYS0 192 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 IGF2BP3O00425 579 aaKnown RBP eCLIP9.39□□□□□ -0.91
CCDC149-204ENST00000504487 PLCG1P19174 1290 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 FECHP22830 423 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 KLRC1P26715 233 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 ADCY1Q08828 1119 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 OTUD6AQ7L8S5 288 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 LCORLQ8N3X6 602 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 LINC00116Q8NCU8 138 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 PRMT1Q99873 361 aaKnown RBP9.39□□□□□ -0.91
CCDC149-204ENST00000504487 ZMYND12Q9H0C1 365 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 ISCUQ9H1K1 167 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 DAAM1Q9Y4D1 1078 aa9.39□□□□□ -0.91
CCDC149-204ENST00000504487 ABCC12Q96J65 1359 aa9.38□□□□□ -0.91
CCDC149-204ENST00000504487 SERPING1P05155 500 aa9.38□□□□□ -0.91
CCDC149-204ENST00000504487 CCND1P24385 295 aa9.38□□□□□ -0.91
CCDC149-204ENST00000504487 RANBP1P43487 201 aa9.38□□□□□ -0.91
CCDC149-204ENST00000504487 NAPAP54920 295 aa9.38□□□□□ -0.91
CCDC149-204ENST00000504487 STK4Q13043 487 aa9.38□□□□□ -0.91
CCDC149-204ENST00000504487 ZFYVE27Q5T4F4 411 aa9.38□□□□□ -0.91
CCDC149-204ENST00000504487 AGBL2Q5U5Z8 902 aa9.38□□□□□ -0.91
CCDC149-204ENST00000504487 KLHDC7AQ5VTJ3 777 aa9.38□□□□□ -0.91
CCDC149-204ENST00000504487 LRRC34Q8IZ02 419 aa9.38□□□□□ -0.91
CCDC149-204ENST00000504487 AGAP11Q8TF27 550 aa9.38□□□□□ -0.91
CCDC149-204ENST00000504487 ARHGEF2Q92974 986 aaKnown RBP9.38□□□□□ -0.91
CCDC149-204ENST00000504487 PBKQ96KB5 322 aa9.38□□□□□ -0.91
CCDC149-204ENST00000504487 AZI2Q9H6S1 392 aa9.38□□□□□ -0.91
CCDC149-204ENST00000504487 GDF3Q9NR23 364 aa9.38□□□□□ -0.91
CCDC149-204ENST00000504487 ITSN1Q15811 1721 aa9.38□□□□□ -0.91
CCDC149-204ENST00000504487 FLOT1O75955 427 aa9.38□□□□□ -0.91
CCDC149-204ENST00000504487 CTCFP49711 727 aaPredicted RBP9.38□□□□□ -0.91
CCDC149-204ENST00000504487 EN1Q05925 392 aaPredicted RBP9.38□□□□□ -0.91
CCDC149-204ENST00000504487 CALCOCO2Q13137 446 aa9.38□□□□□ -0.91
CCDC149-204ENST00000504487 BZW1Q7L1Q6 419 aaKnown RBP9.38□□□□□ -0.91
CCDC149-204ENST00000504487 USP38Q8NB14 1042 aa9.38□□□□□ -0.91
CCDC149-204ENST00000504487 ETAA1Q9NY74 926 aa9.38□□□□□ -0.91
CCDC149-204ENST00000504487 AMFRQ9UKV5 643 aa9.38□□□□□ -0.91
CCDC149-204ENST00000504487 RASSF10A6NK89 507 aa9.38□□□□□ -0.91
CCDC149-204ENST00000504487 HSPA9P38646 679 aaKnown RBP9.38□□□□□ -0.91
CCDC149-204ENST00000504487 ZNF844Q08AG5 666 aa9.38□□□□□ -0.91
CCDC149-204ENST00000504487 SEPT2Q15019 361 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms