RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 SUGCTQ9HAC7 445 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 HDAC6Q9UBN7 1215 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 GTF2IRD1Q9UHL9 959 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 MRVI1Q9Y6F6 885 aa10.58□□□□□ -0.72
DHFR-202ENST00000504396 ABCB11O95342 1321 aa10.57□□□□□ -0.72
DHFR-202ENST00000504396 A0A0D9SFI3 127 aa10.57□□□□□ -0.72
DHFR-202ENST00000504396 LINC01553A4QN01 128 aa10.57□□□□□ -0.72
DHFR-202ENST00000504396 GPR37L1O60883 481 aa10.57□□□□□ -0.72
DHFR-202ENST00000504396 EFCAB14O75071 495 aa10.57□□□□□ -0.72
DHFR-202ENST00000504396 CD2BP2O95400 341 aaKnown RBP10.57□□□□□ -0.72
DHFR-202ENST00000504396 SNHG28P0DPA3 235 aa10.57□□□□□ -0.72
DHFR-202ENST00000504396 KIAA0753Q2KHM9 967 aa10.57□□□□□ -0.72
DHFR-202ENST00000504396 MCMDC2Q4G0Z9 681 aa10.57□□□□□ -0.72
DHFR-202ENST00000504396 ANKRD45Q5TZF3 282 aa10.57□□□□□ -0.72
DHFR-202ENST00000504396 SESTD1Q86VW0 696 aa10.57□□□□□ -0.72
DHFR-202ENST00000504396 MCF2L2Q86YR7 1114 aa10.57□□□□□ -0.72
DHFR-202ENST00000504396 MYOCDQ8IZQ8 938 aa10.57□□□□□ -0.72
DHFR-202ENST00000504396 PRR7Q8TB68 274 aa10.57□□□□□ -0.72
DHFR-202ENST00000504396 ESR2Q92731 530 aa10.57□□□□□ -0.72
DHFR-202ENST00000504396 KAT2BQ92831 832 aa10.57□□□□□ -0.72
DHFR-202ENST00000504396 TAAR1Q96RJ0 339 aa10.57□□□□□ -0.72
DHFR-202ENST00000504396 RMDN3Q96TC7 470 aa10.57□□□□□ -0.72
DHFR-202ENST00000504396 RNF41Q9H4P4 317 aaPredicted RBP10.57□□□□□ -0.72
DHFR-202ENST00000504396 LMCD1Q9NZU5 365 aa10.57□□□□□ -0.72
DHFR-202ENST00000504396 TRANK1O15050 2925 aa10.57□□□□□ -0.72
DHFR-202ENST00000504396 SALL3Q9BXA9 1300 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 MYH6P13533 1939 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 RBAK-RBAKDNI3L0D1 243 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 GDF9O60383 454 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 CFBP00751 764 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 AMHP03971 560 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 HSPD1P10809 573 aaKnown RBP10.56□□□□□ -0.72
DHFR-202ENST00000504396 IL9P15248 144 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 ERVK-21P61565 698 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 RBL2Q08999 1139 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 FOXC1Q12948 553 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 PTK7Q13308 1070 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 CCDC178Q5BJE1 867 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 ZNF618Q5T7W0 954 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 PTCRAQ6ISU1 281 aaPredicted RBP10.56□□□□□ -0.72
DHFR-202ENST00000504396 CCDC62Q6P9F0 684 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 TBC1D10CQ8IV04 446 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 GJD3Q8N144 294 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 SYTL5Q8TDW5 730 aaPredicted RBP10.56□□□□□ -0.72
DHFR-202ENST00000504396 TBC1D5Q92609 795 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 CTAGE1Q96RT6 745 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 C17orf80Q9BSJ5 609 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 KDM4CQ9H3R0 1056 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 KAT14Q9H8E8 782 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 VAT1LQ9HCJ6 419 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 CD320Q9NPF0 282 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 C11orf16Q9NQ32 467 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 LIMD1Q9UGP4 676 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 NEDD4P46934 1319 aa10.56□□□□□ -0.72
DHFR-202ENST00000504396 PI4K2BG5E9Z4 385 aa10.55□□□□□ -0.72
DHFR-202ENST00000504396 LGR5O75473 907 aa10.55□□□□□ -0.72
DHFR-202ENST00000504396 CXCL10P02778 98 aa10.55□□□□□ -0.72
DHFR-202ENST00000504396 MYCLP12524 364 aaPredicted RBP10.55□□□□□ -0.72
DHFR-202ENST00000504396 THPOP40225 353 aa10.55□□□□□ -0.72
DHFR-202ENST00000504396 PRR20EP86478 221 aa10.55□□□□□ -0.72
DHFR-202ENST00000504396 PRR20CP86479 221 aa10.55□□□□□ -0.72
DHFR-202ENST00000504396 PRR20DP86480 221 aa10.55□□□□□ -0.72
DHFR-202ENST00000504396 PRR20BP86481 221 aa10.55□□□□□ -0.72
DHFR-202ENST00000504396 PRR20AP86496 221 aa10.55□□□□□ -0.72
DHFR-202ENST00000504396 ZNF200P98182 395 aaPredicted RBP10.55□□□□□ -0.72
DHFR-202ENST00000504396 NMIQ13287 307 aaPredicted RBP10.55□□□□□ -0.72
DHFR-202ENST00000504396 LAMC2Q13753 1193 aa10.55□□□□□ -0.72
DHFR-202ENST00000504396 GPNMBQ14956 572 aa10.55□□□□□ -0.72
DHFR-202ENST00000504396 PTPROQ16827 1216 aa10.55□□□□□ -0.72
DHFR-202ENST00000504396 TCTN1Q2MV58 587 aa10.55□□□□□ -0.72
DHFR-202ENST00000504396 LEXMQ3ZCV2 418 aa10.55□□□□□ -0.72
DHFR-202ENST00000504396 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.55□□□□□ -0.72
DHFR-202ENST00000504396 ZNF589Q86UQ0 364 aaPredicted RBP10.55□□□□□ -0.72
DHFR-202ENST00000504396 IQCA1Q86XH1 822 aa10.55□□□□□ -0.72
DHFR-202ENST00000504396 PNMA1Q8ND90 353 aa10.55□□□□□ -0.72
DHFR-202ENST00000504396 RILPL2Q969X0 211 aa10.55□□□□□ -0.72
DHFR-202ENST00000504396 IWS1Q96ST2 819 aa10.55□□□□□ -0.72
DHFR-202ENST00000504396 YME1L1Q96TA2 773 aa10.55□□□□□ -0.72
DHFR-202ENST00000504396 COL20A1Q9P218 1284 aa10.55□□□□□ -0.72
DHFR-202ENST00000504396 DDX41Q9UJV9 622 aaKnown RBP10.55□□□□□ -0.72
DHFR-202ENST00000504396 MRPL11Q9Y3B7 192 aaKnown RBP10.55□□□□□ -0.72
DHFR-202ENST00000504396 INSL6Q9Y581 213 aa10.55□□□□□ -0.72
DHFR-202ENST00000504396 CCDC171Q6TFL3 1326 aa10.55□□□□□ -0.72
DHFR-202ENST00000504396 EMSYQ7Z589 1322 aa10.55□□□□□ -0.72
DHFR-202ENST00000504396 LAMA4Q16363 1823 aa10.55□□□□□ -0.72
DHFR-202ENST00000504396 MYH7BA7E2Y1 1941 aa10.54□□□□□ -0.72
DHFR-202ENST00000504396 H3BQ06 376 aaPredicted RBP10.54□□□□□ -0.72
DHFR-202ENST00000504396 UPP2O95045 317 aa10.54□□□□□ -0.72
DHFR-202ENST00000504396 F2P00734 622 aa10.54□□□□□ -0.72
DHFR-202ENST00000504396 MFAP1P55081 439 aaKnown RBP10.54□□□□□ -0.72
DHFR-202ENST00000504396 QRICH1Q2TAL8 776 aa10.54□□□□□ -0.72
DHFR-202ENST00000504396 ALYREFQ86V81 257 aaKnown RBP10.54□□□□□ -0.72
DHFR-202ENST00000504396 FBXO11Q86XK2 927 aa10.54□□□□□ -0.72
DHFR-202ENST00000504396 DGKHQ86XP1 1220 aa10.54□□□□□ -0.72
DHFR-202ENST00000504396 FAM178BQ8IXR5 827 aa10.54□□□□□ -0.72
DHFR-202ENST00000504396 ADGRF4Q8IZF3 695 aa10.54□□□□□ -0.72
DHFR-202ENST00000504396 PPTC7Q8NI37 304 aa10.54□□□□□ -0.72
DHFR-202ENST00000504396 WNT8BQ93098 351 aa10.54□□□□□ -0.72
DHFR-202ENST00000504396 SPATA33Q96N06 139 aa10.54□□□□□ -0.72
DHFR-202ENST00000504396 PKD2L1Q9P0L9 805 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms