RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 BTBD8Q5XKL5 378 aa7.38□□□□□ -1.23
COPS4-203ENST00000504274 CNKSR3Q6P9H4 555 aa7.38□□□□□ -1.23
COPS4-203ENST00000504274 HHIPL2Q6UWX4 724 aa7.38□□□□□ -1.23
COPS4-203ENST00000504274 ANKLE2Q86XL3 938 aa7.38□□□□□ -1.23
COPS4-203ENST00000504274 PROSER1Q86XN7 944 aa7.38□□□□□ -1.23
COPS4-203ENST00000504274 NOSTRINQ8IVI9 506 aa7.38□□□□□ -1.23
COPS4-203ENST00000504274 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.37□□□□□ -1.23
COPS4-203ENST00000504274 KPNA6O60684 536 aa7.37□□□□□ -1.23
COPS4-203ENST00000504274 CYP2C8P10632 490 aa7.37□□□□□ -1.23
COPS4-203ENST00000504274 FAHP16930 419 aa7.37□□□□□ -1.23
COPS4-203ENST00000504274 FIGNQ5HY92 759 aa7.37□□□□□ -1.23
COPS4-203ENST00000504274 CPZQ66K79 652 aa7.37□□□□□ -1.23
COPS4-203ENST00000504274 LIPIQ6XZB0 460 aa7.37□□□□□ -1.23
COPS4-203ENST00000504274 NLGN4XQ8N0W4 816 aa7.37□□□□□ -1.23
COPS4-203ENST00000504274 C2orf69Q8N8R5 385 aa7.37□□□□□ -1.23
COPS4-203ENST00000504274 PWWP2AQ96N64 755 aa7.37□□□□□ -1.23
COPS4-203ENST00000504274 NUB1Q9Y5A7 615 aa7.37□□□□□ -1.23
COPS4-203ENST00000504274 ATP23Q9Y6H3 246 aa7.37□□□□□ -1.23
COPS4-203ENST00000504274 CBX4O00257 560 aa7.36□□□□□ -1.23
COPS4-203ENST00000504274 SCDO00767 359 aa7.36□□□□□ -1.23
COPS4-203ENST00000504274 C4BPAP04003 597 aaKnown RBP7.36□□□□□ -1.23
COPS4-203ENST00000504274 ZBTB48P10074 688 aaPredicted RBP7.36□□□□□ -1.23
COPS4-203ENST00000504274 MYCLP1P12525 358 aaPredicted RBP7.36□□□□□ -1.23
COPS4-203ENST00000504274 PTPN1P18031 435 aaKnown RBP7.36□□□□□ -1.23
COPS4-203ENST00000504274 THBS2P35442 1172 aa7.36□□□□□ -1.23
COPS4-203ENST00000504274 NEK4P51957 841 aa7.36□□□□□ -1.23
COPS4-203ENST00000504274 NKX3-2P78367 333 aa7.36□□□□□ -1.23
COPS4-203ENST00000504274 HTRA3P83110 453 aa7.36□□□□□ -1.23
COPS4-203ENST00000504274 SKOR2Q2VWA4 1001 aaPredicted RBP7.36□□□□□ -1.23
COPS4-203ENST00000504274 UBE2R2Q712K3 238 aaPredicted RBP7.36□□□□□ -1.23
COPS4-203ENST00000504274 ZC3H18Q86VM9 953 aaKnown RBP7.36□□□□□ -1.23
COPS4-203ENST00000504274 FNIP1Q8TF40 1166 aa7.36□□□□□ -1.23
COPS4-203ENST00000504274 DACT3Q96B18 629 aaPredicted RBP7.36□□□□□ -1.23
COPS4-203ENST00000504274 WNK4Q96J92 1243 aa7.36□□□□□ -1.23
COPS4-203ENST00000504274 IRF2BPLQ9H1B7 796 aa7.36□□□□□ -1.23
COPS4-203ENST00000504274 RIC8BQ9NVN3 520 aa7.36□□□□□ -1.23
COPS4-203ENST00000504274 GSG1L2A8MUP6 293 aa7.35□□□□□ -1.23
COPS4-203ENST00000504274 CLASP2O75122 1294 aaKnown RBP7.35□□□□□ -1.23
COPS4-203ENST00000504274 YBX3P16989 372 aaKnown RBP eCLIP7.35□□□□□ -1.23
COPS4-203ENST00000504274 POU3F2P20265 443 aaPredicted RBP7.35□□□□□ -1.23
COPS4-203ENST00000504274 CFPP27918 469 aa7.35□□□□□ -1.23
COPS4-203ENST00000504274 FLT3P36888 993 aa7.35□□□□□ -1.23
COPS4-203ENST00000504274 ITGA1P56199 1179 aa7.35□□□□□ -1.23
COPS4-203ENST00000504274 SMAD4Q13485 552 aaKnown RBP7.35□□□□□ -1.23
COPS4-203ENST00000504274 TMC5Q6UXY8 1006 aa7.35□□□□□ -1.23
COPS4-203ENST00000504274 EP400NLQ6ZTU2 488 aa7.35□□□□□ -1.23
COPS4-203ENST00000504274 OTOP1Q7RTM1 612 aa7.35□□□□□ -1.23
COPS4-203ENST00000504274 CHST14Q8NCH0 376 aa7.35□□□□□ -1.23
COPS4-203ENST00000504274 C11orf84Q9BUA3 381 aaPredicted RBP7.35□□□□□ -1.23
COPS4-203ENST00000504274 HSPBP1Q9NZL4 362 aa7.35□□□□□ -1.23
COPS4-203ENST00000504274 PMF1-BGLAPU3KQ54 211 aa7.35□□□□□ -1.23
COPS4-203ENST00000504274 SLC12A8A0AV02 714 aa7.34□□□□□ -1.23
COPS4-203ENST00000504274 PTPDC1A2A3K4 754 aa7.34□□□□□ -1.23
COPS4-203ENST00000504274 KRT37O76014 449 aa7.34□□□□□ -1.23
COPS4-203ENST00000504274 DLX2Q07687 328 aaPredicted RBP7.34□□□□□ -1.23
COPS4-203ENST00000504274 ADAM9Q13443 819 aa7.34□□□□□ -1.23
COPS4-203ENST00000504274 RTP5Q14D33 572 aa7.34□□□□□ -1.23
COPS4-203ENST00000504274 SEPT7Q16181 437 aaKnown RBP7.34□□□□□ -1.23
COPS4-203ENST00000504274 VMACQ2NL98 169 aa7.34□□□□□ -1.23
COPS4-203ENST00000504274 ZNF385BQ569K4 471 aa7.34□□□□□ -1.23
COPS4-203ENST00000504274 PKN3Q6P5Z2 889 aa7.34□□□□□ -1.23
COPS4-203ENST00000504274 C1QL4Q86Z23 238 aa7.34□□□□□ -1.23
COPS4-203ENST00000504274 KRTAP19-1Q8IUB9 90 aa7.34□□□□□ -1.23
COPS4-203ENST00000504274 LINC00482Q8N8I6 264 aa7.34□□□□□ -1.23
COPS4-203ENST00000504274 DLG3Q92796 817 aa7.34□□□□□ -1.23
COPS4-203ENST00000504274 KRTAP9-2Q9BYQ4 174 aa7.34□□□□□ -1.23
COPS4-203ENST00000504274 NGRNQ9NPE2 291 aaKnown RBP7.34□□□□□ -1.23
COPS4-203ENST00000504274 SPATA6Q9NWH7 488 aaPredicted RBP7.34□□□□□ -1.23
COPS4-203ENST00000504274 LOC105371045A0A1W2PR82 267 aa7.33□□□□□ -1.24
COPS4-203ENST00000504274 DBX1A6NMT0 343 aa7.33□□□□□ -1.24
COPS4-203ENST00000504274 ZNF891A8MT65 544 aaPredicted RBP7.33□□□□□ -1.24
COPS4-203ENST00000504274 RFXAPO00287 272 aa7.33□□□□□ -1.24
COPS4-203ENST00000504274 DVL2O14641 736 aa7.33□□□□□ -1.24
COPS4-203ENST00000504274 NUAK1O60285 661 aa7.33□□□□□ -1.24
COPS4-203ENST00000504274 PDE8AO60658 829 aa7.33□□□□□ -1.24
COPS4-203ENST00000504274 MASP1P48740 699 aa7.33□□□□□ -1.24
COPS4-203ENST00000504274 IRF9Q00978 393 aa7.33□□□□□ -1.24
COPS4-203ENST00000504274 VWA3BQ502W6 1294 aa7.33□□□□□ -1.24
COPS4-203ENST00000504274 PHF19Q5T6S3 580 aa7.33□□□□□ -1.24
COPS4-203ENST00000504274 CD276Q5ZPR3 534 aa7.33□□□□□ -1.24
COPS4-203ENST00000504274 ZNF662Q6ZS27 426 aa7.33□□□□□ -1.24
COPS4-203ENST00000504274 THNSL2Q86YJ6 484 aa7.33□□□□□ -1.24
COPS4-203ENST00000504274 LRRC56Q8IYG6 542 aaPredicted RBP7.33□□□□□ -1.24
COPS4-203ENST00000504274 ADGRG2Q8IZP9 1017 aa7.33□□□□□ -1.24
COPS4-203ENST00000504274 NXPE1Q8N323 547 aa7.33□□□□□ -1.24
COPS4-203ENST00000504274 ZNF526Q8TF50 670 aaPredicted RBP7.33□□□□□ -1.24
COPS4-203ENST00000504274 ZBTB8AQ96BR9 441 aa7.33□□□□□ -1.24
COPS4-203ENST00000504274 ZSWIM3Q96MP5 696 aa7.33□□□□□ -1.24
COPS4-203ENST00000504274 SLKQ9H2G2 1235 aaPredicted RBP7.33□□□□□ -1.24
COPS4-203ENST00000504274 B4GALT6Q9UBX8 382 aa7.33□□□□□ -1.24
COPS4-203ENST00000504274 B3GALT1Q9Y5Z6 326 aa7.33□□□□□ -1.24
COPS4-203ENST00000504274 FFAR3O14843 346 aa7.32□□□□□ -1.24
COPS4-203ENST00000504274 AFF3P51826 1226 aaKnown RBP7.32□□□□□ -1.24
COPS4-203ENST00000504274 CREB3L3Q68CJ9 461 aa7.32□□□□□ -1.24
COPS4-203ENST00000504274 CIAPIN1Q6FI81 312 aa7.32□□□□□ -1.24
COPS4-203ENST00000504274 KRTAP4-12Q9BQ66 201 aa7.32□□□□□ -1.24
COPS4-203ENST00000504274 ORAI3Q9BRQ5 295 aa7.32□□□□□ -1.24
COPS4-203ENST00000504274 BOCQ9BWV1 1114 aa7.32□□□□□ -1.24
COPS4-203ENST00000504274 GOLGA2P5Q9HBQ8 144 aa7.32□□□□□ -1.24
COPS4-203ENST00000504274 CABP5Q9NP86 173 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms