RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 RPTNQ6XPR3 784 aa6.75□□□□□ -1.33
TRAPPC13-205ENST00000504243 LHFPL2Q6ZUX7 228 aa6.75□□□□□ -1.33
TRAPPC13-205ENST00000504243 DCP2Q8IU60 420 aaKnown RBP6.75□□□□□ -1.33
TRAPPC13-205ENST00000504243 Q8N1Y9 231 aa6.75□□□□□ -1.33
TRAPPC13-205ENST00000504243 SMC1BQ8NDV3 1235 aa6.75□□□□□ -1.33
TRAPPC13-205ENST00000504243 CD244Q9BZW8 370 aa6.75□□□□□ -1.33
TRAPPC13-205ENST00000504243 PCIF1Q9H4Z3 704 aa6.75□□□□□ -1.33
TRAPPC13-205ENST00000504243 KCNK12Q9HB15 430 aa6.75□□□□□ -1.33
TRAPPC13-205ENST00000504243 NUDT5Q9UKK9 219 aa6.75□□□□□ -1.33
TRAPPC13-205ENST00000504243 APOBEC2Q9Y235 224 aaKnown RBP6.75□□□□□ -1.33
TRAPPC13-205ENST00000504243 SIT1Q9Y3P8 196 aa6.75□□□□□ -1.33
TRAPPC13-205ENST00000504243 ZC3H12DA2A288 527 aaKnown RBP6.74□□□□□ -1.33
TRAPPC13-205ENST00000504243 F8W031 263 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC13-205ENST00000504243 ZNF561-AS1K7EIQ3 104 aa6.74□□□□□ -1.33
TRAPPC13-205ENST00000504243 ETV2O00321 342 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC13-205ENST00000504243 GPR39O43194 453 aa6.74□□□□□ -1.33
TRAPPC13-205ENST00000504243 KATNA1O75449 491 aa6.74□□□□□ -1.33
TRAPPC13-205ENST00000504243 EYA4O95677 639 aa6.74□□□□□ -1.33
TRAPPC13-205ENST00000504243 MED14OSP0DP75 135 aa6.74□□□□□ -1.33
TRAPPC13-205ENST00000504243 ATP2A2P16615 1042 aaKnown RBP6.74□□□□□ -1.33
TRAPPC13-205ENST00000504243 ADCYAP1R1P41586 468 aa6.74□□□□□ -1.33
TRAPPC13-205ENST00000504243 RAP1GAPP47736 663 aa6.74□□□□□ -1.33
TRAPPC13-205ENST00000504243 IRF9Q00978 393 aa6.74□□□□□ -1.33
TRAPPC13-205ENST00000504243 DSG1Q02413 1049 aa6.74□□□□□ -1.33
TRAPPC13-205ENST00000504243 HDGFL2Q7Z4V5 671 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC13-205ENST00000504243 MILR1Q7Z6M3 343 aa6.74□□□□□ -1.33
TRAPPC13-205ENST00000504243 PASD1Q8IV76 773 aa6.74□□□□□ -1.33
TRAPPC13-205ENST00000504243 RBM12BQ8IXT5 1001 aaKnown RBP6.74□□□□□ -1.33
TRAPPC13-205ENST00000504243 NLGN4XQ8N0W4 816 aa6.74□□□□□ -1.33
TRAPPC13-205ENST00000504243 MTMR8Q96EF0 704 aa6.74□□□□□ -1.33
TRAPPC13-205ENST00000504243 ORAI3Q9BRQ5 295 aa6.74□□□□□ -1.33
TRAPPC13-205ENST00000504243 BOCQ9BWV1 1114 aa6.74□□□□□ -1.33
TRAPPC13-205ENST00000504243 GOLGA2P5Q9HBQ8 144 aa6.74□□□□□ -1.33
TRAPPC13-205ENST00000504243 SMURF1Q9HCE7 757 aa6.74□□□□□ -1.33
TRAPPC13-205ENST00000504243 SPTLC3Q9NUV7 552 aa6.74□□□□□ -1.33
TRAPPC13-205ENST00000504243 TCAF2A6NFQ2 919 aa6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 AMY2AP04746 511 aa6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 YBX3P16989 372 aaKnown RBP eCLIP6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 AMY2BP19961 511 aa6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 PMLP29590 882 aa6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 LSSP48449 732 aa6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 MECP2P51608 486 aaKnown RBP6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 DLG4P78352 724 aa6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 TMEM132BQ14DG7 1078 aa6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 PLEKHG6Q3KR16 790 aa6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 PLEKHN1Q494U1 663 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 BRDTQ58F21 947 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 CPZQ66K79 652 aa6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 TMC6Q7Z403 805 aa6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 SPATS2Q86XZ4 545 aaKnown RBP6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 STAG1Q8WVM7 1258 aa6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 SEC14L1Q92503 715 aa6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 PEX11GQ96HA9 241 aa6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 SMAD5Q99717 465 aaKnown RBP6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 METTL14Q9HCE5 456 aaKnown RBP6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 RIC8BQ9NVN3 520 aa6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 OXSMQ9NWU1 459 aa6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 H2AFY2Q9P0M6 372 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 MYOTQ9UBF9 498 aa6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 MBD1Q9UIS9 605 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 G3BP2Q9UN86 482 aaKnown RBP6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 PCDHB4Q9Y5E5 795 aa6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 ATP23Q9Y6H3 246 aa6.73□□□□□ -1.33
TRAPPC13-205ENST00000504243 TCRBV5S4A2TA0A5A2 114 aa6.72□□□□□ -1.33
TRAPPC13-205ENST00000504243 MAN2B1O00754 1011 aa6.72□□□□□ -1.33
TRAPPC13-205ENST00000504243 ZBTB7AO95365 584 aa6.72□□□□□ -1.33
TRAPPC13-205ENST00000504243 BPIP17213 487 aa6.72□□□□□ -1.33
TRAPPC13-205ENST00000504243 SLC9A1P19634 815 aa6.72□□□□□ -1.33
TRAPPC13-205ENST00000504243 SLC9A5Q14940 896 aa6.72□□□□□ -1.33
TRAPPC13-205ENST00000504243 ATG14Q6ZNE5 492 aa6.72□□□□□ -1.33
TRAPPC13-205ENST00000504243 UHMK1Q8TAS1 419 aaKnown RBP6.72□□□□□ -1.33
TRAPPC13-205ENST00000504243 COG1Q8WTW3 980 aa6.72□□□□□ -1.33
TRAPPC13-205ENST00000504243 YIPF4Q9BSR8 244 aa6.72□□□□□ -1.33
TRAPPC13-205ENST00000504243 SMOC1Q9H4F8 434 aa6.72□□□□□ -1.33
TRAPPC13-205ENST00000504243 TOMM22Q9NS69 142 aa6.72□□□□□ -1.33
TRAPPC13-205ENST00000504243 TYW1Q9NV66 732 aaKnown RBP6.72□□□□□ -1.33
TRAPPC13-205ENST00000504243 PALD1Q9ULE6 856 aa6.72□□□□□ -1.33
TRAPPC13-205ENST00000504243 SRPK3Q9UPE1 567 aa6.72□□□□□ -1.33
TRAPPC13-205ENST00000504243 WASHC2CQ9Y4E1 1318 aa6.72□□□□□ -1.33
TRAPPC13-205ENST00000504243 LTFP02788 710 aa6.71□□□□□ -1.34
TRAPPC13-205ENST00000504243 C1QTNF9P0C862 333 aa6.71□□□□□ -1.34
TRAPPC13-205ENST00000504243 SLC6A11P48066 632 aa6.71□□□□□ -1.34
TRAPPC13-205ENST00000504243 KIF11P52732 1056 aa6.71□□□□□ -1.34
TRAPPC13-205ENST00000504243 EXOSC10Q01780 885 aaKnown RBP6.71□□□□□ -1.34
TRAPPC13-205ENST00000504243 GRIN1Q05586 938 aa6.71□□□□□ -1.34
TRAPPC13-205ENST00000504243 TUSC3Q13454 348 aa6.71□□□□□ -1.34
TRAPPC13-205ENST00000504243 ZNF124Q15973 351 aa6.71□□□□□ -1.34
TRAPPC13-205ENST00000504243 FIGNQ5HY92 759 aa6.71□□□□□ -1.34
TRAPPC13-205ENST00000504243 ODR4Q5SWX8 454 aa6.71□□□□□ -1.34
TRAPPC13-205ENST00000504243 BTBD8Q5XKL5 378 aa6.71□□□□□ -1.34
TRAPPC13-205ENST00000504243 HHIPL2Q6UWX4 724 aa6.71□□□□□ -1.34
TRAPPC13-205ENST00000504243 KCTD1Q719H9 257 aa6.71□□□□□ -1.34
TRAPPC13-205ENST00000504243 NECAB2Q7Z6G3 386 aa6.71□□□□□ -1.34
TRAPPC13-205ENST00000504243 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.71□□□□□ -1.34
TRAPPC13-205ENST00000504243 TRIM48Q8IWZ4 208 aa6.71□□□□□ -1.34
TRAPPC13-205ENST00000504243 KIAA1958Q8N8K9 716 aa6.71□□□□□ -1.34
TRAPPC13-205ENST00000504243 CNTD2Q9H8S5 307 aa6.71□□□□□ -1.34
TRAPPC13-205ENST00000504243 EMC7Q9NPA0 242 aa6.71□□□□□ -1.34
TRAPPC13-205ENST00000504243 PHLDB1Q86UU1 1377 aa6.7□□□□□ -1.34
TRAPPC13-205ENST00000504243 N4BP3O15049 544 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms