RNA–Protein interactions for RNA: ENST00000504223.1

SH3TC1-208, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 3

Gene SH3TC1, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-208ENST00000504223 SMIM10L2AP0DMW4 78 aa20.57■□□□□ 0.88
SH3TC1-208ENST00000504223 SMIM10L2BP0DMW5 78 aa20.57■□□□□ 0.88
SH3TC1-208ENST00000504223 ARP10275 920 aa20.57■□□□□ 0.88
SH3TC1-208ENST00000504223 RAB30Q15771 203 aa20.57■□□□□ 0.88
SH3TC1-208ENST00000504223 SERINC5Q86VE9 423 aa20.57■□□□□ 0.88
SH3TC1-208ENST00000504223 EHMT1Q9H9B1 1298 aa20.57■□□□□ 0.88
SH3TC1-208ENST00000504223 KCNH7Q9NS40 1196 aa20.57■□□□□ 0.88
SH3TC1-208ENST00000504223 YBX2Q9Y2T7 364 aaKnown RBP20.57■□□□□ 0.88
SH3TC1-208ENST00000504223 C17orf102A2RUQ5 167 aa20.56■□□□□ 0.88
SH3TC1-208ENST00000504223 MAFGO15525 162 aa20.56■□□□□ 0.88
SH3TC1-208ENST00000504223 EDIL3O43854 480 aa20.56■□□□□ 0.88
SH3TC1-208ENST00000504223 CXCL10P02778 98 aa20.56■□□□□ 0.88
SH3TC1-208ENST00000504223 ACTN1P12814 892 aa20.56■□□□□ 0.88
SH3TC1-208ENST00000504223 ATP2A2P16615 1042 aaKnown RBP20.56■□□□□ 0.88
SH3TC1-208ENST00000504223 ARHGAP4P98171 946 aa20.56■□□□□ 0.88
SH3TC1-208ENST00000504223 SCRN1Q12765 414 aa20.56■□□□□ 0.88
SH3TC1-208ENST00000504223 UTP14CQ5TAP6 766 aaKnown RBP20.56■□□□□ 0.88
SH3TC1-208ENST00000504223 AIFM3Q96NN9 605 aa20.56■□□□□ 0.88
SH3TC1-208ENST00000504223 FTOQ9C0B1 505 aaKnown RBP eCLIP20.56■□□□□ 0.88
SH3TC1-208ENST00000504223 GLT8D2Q9H1C3 349 aa20.56■□□□□ 0.88
SH3TC1-208ENST00000504223 RNPEPQ9H4A4 650 aa20.56■□□□□ 0.88
SH3TC1-208ENST00000504223 MSRAQ9UJ68 235 aa20.56■□□□□ 0.88
SH3TC1-208ENST00000504223 FAM86B1E9PN63 330 aa20.55■□□□□ 0.88
SH3TC1-208ENST00000504223 MEIS1O00470 390 aa20.55■□□□□ 0.88
SH3TC1-208ENST00000504223 NBNO60934 754 aa20.55■□□□□ 0.88
SH3TC1-208ENST00000504223 PARNO95453 639 aaKnown RBP20.55■□□□□ 0.88
SH3TC1-208ENST00000504223 FAM86B2P0C5J1 330 aa20.55■□□□□ 0.88
SH3TC1-208ENST00000504223 RABGGTBP53611 331 aa20.55■□□□□ 0.88
SH3TC1-208ENST00000504223 AK2P54819 239 aa20.55■□□□□ 0.88
SH3TC1-208ENST00000504223 AKAP17AQ02040 695 aaKnown RBP20.55■□□□□ 0.88
SH3TC1-208ENST00000504223 ITGB3BPQ13352 177 aaPredicted RBP20.55■□□□□ 0.88
SH3TC1-208ENST00000504223 MBTPS1Q14703 1052 aa20.55■□□□□ 0.88
SH3TC1-208ENST00000504223 CEP55Q53EZ4 464 aa20.55■□□□□ 0.88
SH3TC1-208ENST00000504223 ZNF618Q5T7W0 954 aa20.55■□□□□ 0.88
SH3TC1-208ENST00000504223 SLC17A8Q8NDX2 589 aa20.55■□□□□ 0.88
SH3TC1-208ENST00000504223 PTPRSQ13332 1948 aa20.55■□□□□ 0.88
SH3TC1-208ENST00000504223 IGLV3-22A0A075B6J6 115 aa20.54■□□□□ 0.88
SH3TC1-208ENST00000504223 TREHO43280 583 aa20.54■□□□□ 0.88
SH3TC1-208ENST00000504223 BAIAP3O94812 1187 aa20.54■□□□□ 0.88
SH3TC1-208ENST00000504223 LARGE1O95461 756 aa20.54■□□□□ 0.88
SH3TC1-208ENST00000504223 TCF7P36402 384 aaPredicted RBP20.54■□□□□ 0.88
SH3TC1-208ENST00000504223 C8orf34Q49A92 452 aa20.54■□□□□ 0.88
SH3TC1-208ENST00000504223 REXO1Q8N1G1 1221 aaKnown RBP20.54■□□□□ 0.88
SH3TC1-208ENST00000504223 ATP6V0A1Q93050 837 aa20.54■□□□□ 0.88
SH3TC1-208ENST00000504223 PCYT2Q99447 389 aa20.54■□□□□ 0.88
SH3TC1-208ENST00000504223 NKX2-4Q9H2Z4 354 aa20.54■□□□□ 0.88
SH3TC1-208ENST00000504223 AGO4Q9HCK5 861 aaKnown RBP20.54■□□□□ 0.88
SH3TC1-208ENST00000504223 C6orf50Q9HD87 102 aa20.54■□□□□ 0.88
SH3TC1-208ENST00000504223 ZNF215Q9UL58 517 aaPredicted RBP20.54■□□□□ 0.88
SH3TC1-208ENST00000504223 PCDHA11Q9Y5I1 949 aa20.54■□□□□ 0.88
SH3TC1-208ENST00000504223 CYP3A4P08684 503 aa20.53■□□□□ 0.88
SH3TC1-208ENST00000504223 FOSL2P15408 326 aa20.53■□□□□ 0.88
SH3TC1-208ENST00000504223 ADAM17P78536 824 aa20.53■□□□□ 0.88
SH3TC1-208ENST00000504223 SSRP1Q08945 709 aaKnown RBP20.53■□□□□ 0.88
SH3TC1-208ENST00000504223 NPY5RQ15761 445 aa20.53■□□□□ 0.88
SH3TC1-208ENST00000504223 TCTN1Q2MV58 587 aa20.53■□□□□ 0.88
SH3TC1-208ENST00000504223 PHOSPHO2Q8TCD6 241 aa20.53■□□□□ 0.88
SH3TC1-208ENST00000504223 CCDC12Q8WUD4 166 aaPredicted RBP20.53■□□□□ 0.88
SH3TC1-208ENST00000504223 UIMC1Q96RL1 719 aa20.53■□□□□ 0.88
SH3TC1-208ENST00000504223 SLC9A7Q96T83 725 aa20.53■□□□□ 0.88
SH3TC1-208ENST00000504223 SETD4Q9NVD3 440 aa20.53■□□□□ 0.88
SH3TC1-208ENST00000504223 PRUNE2Q8WUY3 3088 aa20.52■□□□□ 0.88
SH3TC1-208ENST00000504223 PFKFB2O60825 505 aa20.52■□□□□ 0.88
SH3TC1-208ENST00000504223 CTDNEP1O95476 244 aa20.52■□□□□ 0.88
SH3TC1-208ENST00000504223 MYOGP15173 224 aa20.52■□□□□ 0.88
SH3TC1-208ENST00000504223 MAFAQ8NHW3 353 aaPredicted RBP20.52■□□□□ 0.88
SH3TC1-208ENST00000504223 SEPT1Q8WYJ6 367 aa20.52■□□□□ 0.88
SH3TC1-208ENST00000504223 JPH1Q9HDC5 661 aaPredicted RBP20.52■□□□□ 0.88
SH3TC1-208ENST00000504223 WDR81Q562E7 1941 aa20.52■□□□□ 0.88
SH3TC1-208ENST00000504223 NFASCO94856 1347 aa20.52■□□□□ 0.87
SH3TC1-208ENST00000504223 CPLX1O14810 134 aa20.51■□□□□ 0.87
SH3TC1-208ENST00000504223 DEXIO95424 95 aa20.51■□□□□ 0.87
SH3TC1-208ENST00000504223 GNA11P29992 359 aa20.51■□□□□ 0.87
SH3TC1-208ENST00000504223 THPOP40225 353 aa20.51■□□□□ 0.87
SH3TC1-208ENST00000504223 CNKSR3Q6P9H4 555 aa20.51■□□□□ 0.87
SH3TC1-208ENST00000504223 TRIM22Q8IYM9 498 aa20.51■□□□□ 0.87
SH3TC1-208ENST00000504223 CCDC148Q8NFR7 591 aa20.51■□□□□ 0.87
SH3TC1-208ENST00000504223 LMBR1Q8WVP7 490 aa20.51■□□□□ 0.87
SH3TC1-208ENST00000504223 SLC28A3Q9HAS3 691 aa20.51■□□□□ 0.87
SH3TC1-208ENST00000504223 SH3GLB2Q9NR46 395 aa20.51■□□□□ 0.87
SH3TC1-208ENST00000504223 SLC9A2Q9UBY0 812 aa20.51■□□□□ 0.87
SH3TC1-208ENST00000504223 EMSYQ7Z589 1322 aa20.51■□□□□ 0.87
SH3TC1-208ENST00000504223 NRCAMQ92823 1304 aa20.51■□□□□ 0.87
SH3TC1-208ENST00000504223 VCANP13611 3396 aa20.5■□□□□ 0.87
SH3TC1-208ENST00000504223 TRANK1O15050 2925 aa20.5■□□□□ 0.87
SH3TC1-208ENST00000504223 DHX15O43143 795 aaKnown RBP20.5■□□□□ 0.87
SH3TC1-208ENST00000504223 LGR5O75473 907 aa20.5■□□□□ 0.87
SH3TC1-208ENST00000504223 CCNE2O96020 404 aa20.5■□□□□ 0.87
SH3TC1-208ENST00000504223 GNAT1P11488 350 aa20.5■□□□□ 0.87
SH3TC1-208ENST00000504223 WDR5P61964 334 aaKnown RBP20.5■□□□□ 0.87
SH3TC1-208ENST00000504223 ME3Q16798 604 aa20.5■□□□□ 0.87
SH3TC1-208ENST00000504223 NIPA1Q7RTP0 329 aa20.5■□□□□ 0.87
SH3TC1-208ENST00000504223 PLA2G4DQ86XP0 818 aa20.5■□□□□ 0.87
SH3TC1-208ENST00000504223 HERC6Q8IVU3 1022 aa20.5■□□□□ 0.87
SH3TC1-208ENST00000504223 LENG9Q96B70 501 aa20.5■□□□□ 0.87
SH3TC1-208ENST00000504223 OSBPL7Q9BZF2 842 aa20.5■□□□□ 0.87
SH3TC1-208ENST00000504223 SLKQ9H2G2 1235 aaPredicted RBP20.5■□□□□ 0.87
SH3TC1-208ENST00000504223 PRDM12Q9H4Q4 367 aa20.5■□□□□ 0.87
SH3TC1-208ENST00000504223 SIP14410 1827 aa20.5■□□□□ 0.87
SH3TC1-208ENST00000504223 RSPH10B2B2RC85 870 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms