RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 SRGAP2BP0DMP2 458 aa17.9■□□□□ 0.46
PCDHA1-203ENST00000504120 C2orf54Q08AI8 447 aa17.9■□□□□ 0.46
PCDHA1-203ENST00000504120 AP3B2Q13367 1082 aa17.9■□□□□ 0.46
PCDHA1-203ENST00000504120 DNAJC24Q6P3W2 148 aa17.9■□□□□ 0.46
PCDHA1-203ENST00000504120 RSPH3Q86UC2 560 aa17.9■□□□□ 0.46
PCDHA1-203ENST00000504120 ANAPC5Q9UJX4 755 aa17.9■□□□□ 0.46
PCDHA1-203ENST00000504120 DIP2CQ9Y2E4 1556 aa17.9■□□□□ 0.46
PCDHA1-203ENST00000504120 SYNJ2BP-COX16A0A087WUM0 186 aa17.9■□□□□ 0.46
PCDHA1-203ENST00000504120 PLEKHA8P1O95397 391 aa17.9■□□□□ 0.46
PCDHA1-203ENST00000504120 CCT5P48643 541 aa17.9■□□□□ 0.46
PCDHA1-203ENST00000504120 SLMAPQ14BN4 828 aa17.9■□□□□ 0.46
PCDHA1-203ENST00000504120 KRT31Q15323 416 aa17.9■□□□□ 0.46
PCDHA1-203ENST00000504120 COX16Q9P0S2 106 aa17.9■□□□□ 0.46
PCDHA1-203ENST00000504120 RFX7Q2KHR2 1363 aa17.89■□□□□ 0.46
PCDHA1-203ENST00000504120 MCF2LO15068 1137 aa17.89■□□□□ 0.46
PCDHA1-203ENST00000504120 KRT1P04264 644 aa17.89■□□□□ 0.46
PCDHA1-203ENST00000504120 LIG3P49916 1009 aa17.89■□□□□ 0.46
PCDHA1-203ENST00000504120 SURF1Q15526 300 aa17.89■□□□□ 0.46
PCDHA1-203ENST00000504120 ATP8A1Q9Y2Q0 1164 aa17.89■□□□□ 0.46
PCDHA1-203ENST00000504120 NPR1P16066 1061 aa17.89■□□□□ 0.45
PCDHA1-203ENST00000504120 CFAP61Q8NHU2 1237 aa17.89■□□□□ 0.45
PCDHA1-203ENST00000504120 Q9H521 79 aa17.89■□□□□ 0.45
PCDHA1-203ENST00000504120 MFAP3LO75121 409 aa17.89■□□□□ 0.45
PCDHA1-203ENST00000504120 ECE1P42892 770 aa17.89■□□□□ 0.45
PCDHA1-203ENST00000504120 RCAN1P53805 252 aa17.89■□□□□ 0.45
PCDHA1-203ENST00000504120 DBN1Q16643 649 aa17.89■□□□□ 0.45
PCDHA1-203ENST00000504120 APOL6Q9BWW8 343 aa17.89■□□□□ 0.45
PCDHA1-203ENST00000504120 SNX25Q9H3E2 840 aa17.89■□□□□ 0.45
PCDHA1-203ENST00000504120 SPTLC3Q9NUV7 552 aa17.89■□□□□ 0.45
PCDHA1-203ENST00000504120 SATB1Q01826 763 aa17.89■□□□□ 0.45
PCDHA1-203ENST00000504120 GOLGA8QA0A0J9YX86 632 aa17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 GOLGA8OA6NCC3 632 aa17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 GOLGA8NF8WBI6 632 aa17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 RBBP5Q15291 538 aaKnown RBP17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 BBS5Q8N3I7 341 aa17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 WHAMMQ8TF30 809 aa17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 PRPF31Q8WWY3 499 aaKnown RBP17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 GBP5Q96PP8 586 aa17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 MTA3Q9BTC8 594 aa17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 DLC1Q96QB1 1528 aa17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 ZMYND10O75800 440 aa17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 IGKV5-2P06315 115 aa17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 TFAMQ00059 246 aaKnown RBP17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 CCDC93Q567U6 631 aa17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 ARHGEF18Q6ZSZ5 1173 aa17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 TMEM179Q6ZVK1 233 aa17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 PALLDQ8WX93 1383 aa17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 KRT3P12035 628 aa17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 SAT1P21673 171 aa17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 DHX9Q08211 1270 aaKnown RBP17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 PARD6BQ9BYG5 372 aa17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 CNOT10Q9H9A5 744 aaKnown RBP17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 SPDYE16A6NNV3 312 aaPredicted RBP17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 IFNAR2P48551 515 aa17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 ASPHQ12797 758 aa17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 SPDYE2Q495Y8 402 aa17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 ARMC9Q7Z3E5 817 aa17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 DCAF4Q8WV16 495 aa17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 FAM149B1Q96BN6 582 aa17.88■□□□□ 0.45
PCDHA1-203ENST00000504120 GOLGA8SH3BPF8 625 aa17.87■□□□□ 0.45
PCDHA1-203ENST00000504120 SART1O43290 800 aaKnown RBP17.87■□□□□ 0.45
PCDHA1-203ENST00000504120 CXCR5P32302 372 aa17.87■□□□□ 0.45
PCDHA1-203ENST00000504120 SNX1Q13596 522 aa17.87■□□□□ 0.45
PCDHA1-203ENST00000504120 BAG2O95816 211 aa17.87■□□□□ 0.45
PCDHA1-203ENST00000504120 CLTAP09496 248 aa17.87■□□□□ 0.45
PCDHA1-203ENST00000504120 ATP1A3P13637 1013 aa17.87■□□□□ 0.45
PCDHA1-203ENST00000504120 GPR162Q16538 588 aa17.87■□□□□ 0.45
PCDHA1-203ENST00000504120 ALS2CLQ60I27 953 aa17.87■□□□□ 0.45
PCDHA1-203ENST00000504120 TTC19Q6DKK2 380 aaPredicted RBP17.87■□□□□ 0.45
PCDHA1-203ENST00000504120 UNC13DQ70J99 1090 aa17.87■□□□□ 0.45
PCDHA1-203ENST00000504120 BRINP3Q76B58 766 aa17.87■□□□□ 0.45
PCDHA1-203ENST00000504120 MSH2P43246 934 aa17.87■□□□□ 0.45
PCDHA1-203ENST00000504120 TRIM56Q9BRZ2 755 aaKnown RBP17.87■□□□□ 0.45
PCDHA1-203ENST00000504120 GPC4O75487 556 aa17.87■□□□□ 0.45
PCDHA1-203ENST00000504120 CPP00450 1065 aa17.87■□□□□ 0.45
PCDHA1-203ENST00000504120 MAP2K2P36507 400 aa17.87■□□□□ 0.45
PCDHA1-203ENST00000504120 BIRC2Q13490 618 aa17.87■□□□□ 0.45
PCDHA1-203ENST00000504120 METTL23Q86XA0 190 aa17.87■□□□□ 0.45
PCDHA1-203ENST00000504120 ZNF233A6NK53 670 aa17.86■□□□□ 0.45
PCDHA1-203ENST00000504120 ARL4AP40617 200 aa17.86■□□□□ 0.45
PCDHA1-203ENST00000504120 PFKFB3Q16875 520 aaPredicted RBP17.86■□□□□ 0.45
PCDHA1-203ENST00000504120 EPHA10Q5JZY3 1008 aa17.86■□□□□ 0.45
PCDHA1-203ENST00000504120 AP5M1Q9H0R1 490 aa17.86■□□□□ 0.45
PCDHA1-203ENST00000504120 MTERF2Q49AM1 385 aa17.86■□□□□ 0.45
PCDHA1-203ENST00000504120 TBC1D10BQ4KMP7 808 aaPredicted RBP17.86■□□□□ 0.45
PCDHA1-203ENST00000504120 TBC1D10CQ8IV04 446 aa17.86■□□□□ 0.45
PCDHA1-203ENST00000504120 SLC38A10Q9HBR0 1119 aa17.86■□□□□ 0.45
PCDHA1-203ENST00000504120 SRP68Q9UHB9 627 aaKnown RBP17.86■□□□□ 0.45
PCDHA1-203ENST00000504120 SH3BGRP55822 239 aaPredicted RBP17.86■□□□□ 0.45
PCDHA1-203ENST00000504120 SNCBQ16143 134 aa17.86■□□□□ 0.45
PCDHA1-203ENST00000504120 RHOT2Q8IXI1 618 aa17.86■□□□□ 0.45
PCDHA1-203ENST00000504120 BHMT2Q9H2M3 363 aa17.86■□□□□ 0.45
PCDHA1-203ENST00000504120 ZBTB24O43167 697 aaPredicted RBP17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 DDIT3P35638 169 aa17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 CYP27A1Q02318 531 aa17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 MYO1EQ12965 1108 aa17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 ALKBH5Q6P6C2 394 aaKnown RBP17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 AGLP35573 1532 aa17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 CYP27B1O15528 508 aa17.85■□□□□ 0.45
PCDHA1-203ENST00000504120 CYP2E1P05181 493 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms