RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 BTG4Q9NY30 223 aa6.47□□□□□ -1.37
UBE3D-205ENST00000503942 CYP7B1O75881 506 aa6.46□□□□□ -1.38
UBE3D-205ENST00000503942 HSD3B2P26439 372 aa6.46□□□□□ -1.38
UBE3D-205ENST00000503942 SCRN1Q12765 414 aa6.46□□□□□ -1.38
UBE3D-205ENST00000503942 SF1Q15637 639 aaKnown RBP6.46□□□□□ -1.38
UBE3D-205ENST00000503942 FAM209AQ5JX71 171 aa6.46□□□□□ -1.38
UBE3D-205ENST00000503942 GTF2IRD2BQ6EKJ0 949 aa6.46□□□□□ -1.38
UBE3D-205ENST00000503942 POMZP3Q6PJE2 187 aa6.46□□□□□ -1.38
UBE3D-205ENST00000503942 ZNF662Q6ZS27 426 aa6.46□□□□□ -1.38
UBE3D-205ENST00000503942 GTF2IRD2Q86UP8 949 aa6.46□□□□□ -1.38
UBE3D-205ENST00000503942 Q8N1Y9 231 aa6.46□□□□□ -1.38
UBE3D-205ENST00000503942 KLHL36Q8N4N3 616 aa6.46□□□□□ -1.38
UBE3D-205ENST00000503942 Q8TCH9 128 aa6.46□□□□□ -1.38
UBE3D-205ENST00000503942 OSBP2Q969R2 916 aa6.46□□□□□ -1.38
UBE3D-205ENST00000503942 AARSD1Q9BTE6 412 aaKnown RBP6.46□□□□□ -1.38
UBE3D-205ENST00000503942 GPRC5CQ9NQ84 441 aa6.46□□□□□ -1.38
UBE3D-205ENST00000503942 TRAV20A0A0B4J274 112 aa6.45□□□□□ -1.38
UBE3D-205ENST00000503942 FPR2P25090 351 aa6.45□□□□□ -1.38
UBE3D-205ENST00000503942 FHL2Q14192 279 aa6.45□□□□□ -1.38
UBE3D-205ENST00000503942 INF2Q27J81 1249 aa6.45□□□□□ -1.38
UBE3D-205ENST00000503942 PLEKHG4Q58EX7 1191 aa6.45□□□□□ -1.38
UBE3D-205ENST00000503942 ZSWIM2Q8NEG5 633 aa6.45□□□□□ -1.38
UBE3D-205ENST00000503942 WRNIP1Q96S55 665 aa6.45□□□□□ -1.38
UBE3D-205ENST00000503942 ZNF341Q9BYN7 854 aa6.45□□□□□ -1.38
UBE3D-205ENST00000503942 NKX2-4Q9H2Z4 354 aa6.45□□□□□ -1.38
UBE3D-205ENST00000503942 FTSJ1Q9UET6 329 aa6.45□□□□□ -1.38
UBE3D-205ENST00000503942 ZNF652Q9Y2D9 606 aa6.45□□□□□ -1.38
UBE3D-205ENST00000503942 B4GALT4O60513 344 aa6.44□□□□□ -1.38
UBE3D-205ENST00000503942 CDC45O75419 566 aa6.44□□□□□ -1.38
UBE3D-205ENST00000503942 FGFR1P11362 822 aa6.44□□□□□ -1.38
UBE3D-205ENST00000503942 PABPC1P11940 636 aaKnown RBP6.44□□□□□ -1.38
UBE3D-205ENST00000503942 TGFB2P61812 414 aa6.44□□□□□ -1.38
UBE3D-205ENST00000503942 TKFCQ3LXA3 575 aa6.44□□□□□ -1.38
UBE3D-205ENST00000503942 HOMER1Q86YM7 354 aa6.44□□□□□ -1.38
UBE3D-205ENST00000503942 CRACR2BQ8N4Y2 399 aaPredicted RBP6.44□□□□□ -1.38
UBE3D-205ENST00000503942 APPBP2Q92624 585 aa6.44□□□□□ -1.38
UBE3D-205ENST00000503942 IER2Q9BTL4 223 aa6.44□□□□□ -1.38
UBE3D-205ENST00000503942 X6R8D5 127 aa6.44□□□□□ -1.38
UBE3D-205ENST00000503942 NPIPB8E9PQR5 432 aa6.43□□□□□ -1.38
UBE3D-205ENST00000503942 PPP1R12AO14974 1030 aaPredicted RBP6.43□□□□□ -1.38
UBE3D-205ENST00000503942 PRODHO43272 600 aa6.43□□□□□ -1.38
UBE3D-205ENST00000503942 DLX3O60479 287 aa6.43□□□□□ -1.38
UBE3D-205ENST00000503942 GFRA1P56159 465 aa6.43□□□□□ -1.38
UBE3D-205ENST00000503942 NFATC3Q12968 1075 aa6.43□□□□□ -1.38
UBE3D-205ENST00000503942 ZC3H12BQ5HYM0 836 aaKnown RBP6.43□□□□□ -1.38
UBE3D-205ENST00000503942 KIAA0907Q7Z7F0 614 aaPredicted RBP6.43□□□□□ -1.38
UBE3D-205ENST00000503942 NLRP10Q86W26 655 aa6.43□□□□□ -1.38
UBE3D-205ENST00000503942 TOE1Q96GM8 510 aaKnown RBP6.43□□□□□ -1.38
UBE3D-205ENST00000503942 TMEM209Q96SK2 561 aa6.43□□□□□ -1.38
UBE3D-205ENST00000503942 DHRS4Q9BTZ2 278 aa6.43□□□□□ -1.38
UBE3D-205ENST00000503942 BARX1Q9HBU1 254 aaPredicted RBP6.43□□□□□ -1.38
UBE3D-205ENST00000503942 CYP26B1Q9NR63 512 aa6.43□□□□□ -1.38
UBE3D-205ENST00000503942 DTLQ9NZJ0 730 aa6.43□□□□□ -1.38
UBE3D-205ENST00000503942 C11orf21Q9P2W6 132 aa6.43□□□□□ -1.38
UBE3D-205ENST00000503942 CROTQ9UKG9 612 aa6.43□□□□□ -1.38
UBE3D-205ENST00000503942 SBNO2Q9Y2G9 1366 aa6.43□□□□□ -1.38
UBE3D-205ENST00000503942 TRBV23-1A0A0A0MS06 115 aa6.42□□□□□ -1.38
UBE3D-205ENST00000503942 SCG5P05408 212 aa6.42□□□□□ -1.38
UBE3D-205ENST00000503942 TGM1P22735 817 aa6.42□□□□□ -1.38
UBE3D-205ENST00000503942 HOXC12P31275 282 aa6.42□□□□□ -1.38
UBE3D-205ENST00000503942 RPL11P62913 178 aaKnown RBP6.42□□□□□ -1.38
UBE3D-205ENST00000503942 PURAQ00577 322 aaKnown RBP6.42□□□□□ -1.38
UBE3D-205ENST00000503942 SMN1Q16637 294 aaKnown RBP6.42□□□□□ -1.38
UBE3D-205ENST00000503942 PRSS53Q2L4Q9 553 aa6.42□□□□□ -1.38
UBE3D-205ENST00000503942 MIIPQ5JXC2 388 aa6.42□□□□□ -1.38
UBE3D-205ENST00000503942 DENND5AQ6IQ26 1287 aa6.42□□□□□ -1.38
UBE3D-205ENST00000503942 TEPPQ6URK8 271 aa6.42□□□□□ -1.38
UBE3D-205ENST00000503942 NSMFQ6X4W1 530 aa6.42□□□□□ -1.38
UBE3D-205ENST00000503942 C16orf86Q6ZW13 317 aa6.42□□□□□ -1.38
UBE3D-205ENST00000503942 SCUBE1Q8IWY4 988 aa6.42□□□□□ -1.38
UBE3D-205ENST00000503942 KREMEN2Q8NCW0 462 aa6.42□□□□□ -1.38
UBE3D-205ENST00000503942 C1orf159Q96HA4 380 aa6.42□□□□□ -1.38
UBE3D-205ENST00000503942 CDC6Q99741 560 aa6.42□□□□□ -1.38
UBE3D-205ENST00000503942 MRPS23Q9Y3D9 190 aaKnown RBP6.42□□□□□ -1.38
UBE3D-205ENST00000503942 TIMM13Q9Y5L4 95 aaPredicted RBP6.42□□□□□ -1.38
UBE3D-205ENST00000503942 ABCC9O60706 1549 aa6.41□□□□□ -1.38
UBE3D-205ENST00000503942 ARNTLO00327 626 aa6.41□□□□□ -1.38
UBE3D-205ENST00000503942 ASMTLO95671 621 aa6.41□□□□□ -1.38
UBE3D-205ENST00000503942 INHBEP58166 350 aa6.41□□□□□ -1.38
UBE3D-205ENST00000503942 FOXE3Q13461 319 aa6.41□□□□□ -1.38
UBE3D-205ENST00000503942 HS1BP3Q53T59 392 aa6.41□□□□□ -1.38
UBE3D-205ENST00000503942 SLC35F1Q5T1Q4 408 aa6.41□□□□□ -1.38
UBE3D-205ENST00000503942 RNF207Q6ZRF8 634 aa6.41□□□□□ -1.38
UBE3D-205ENST00000503942 TMEM145Q8NBT3 493 aa6.41□□□□□ -1.38
UBE3D-205ENST00000503942 ARRDC4Q8NCT1 418 aa6.41□□□□□ -1.38
UBE3D-205ENST00000503942 NPLOC4Q8TAT6 608 aa6.41□□□□□ -1.38
UBE3D-205ENST00000503942 FRS2Q8WU20 508 aa6.41□□□□□ -1.38
UBE3D-205ENST00000503942 ADAM29Q9UKF5 820 aa6.41□□□□□ -1.38
UBE3D-205ENST00000503942 WDR33Q9C0J8 1336 aaKnown RBP6.41□□□□□ -1.38
UBE3D-205ENST00000503942 CCDC163A0A0D9SF12 145 aa6.4□□□□□ -1.38
UBE3D-205ENST00000503942 TCRBV5S2A0A599 114 aa6.4□□□□□ -1.38
UBE3D-205ENST00000503942 CNOT4O95628 575 aaKnown RBP6.4□□□□□ -1.38
UBE3D-205ENST00000503942 SNRPB2P08579 225 aaKnown RBP6.4□□□□□ -1.38
UBE3D-205ENST00000503942 C6orf222P0C671 652 aaPredicted RBP6.4□□□□□ -1.38
UBE3D-205ENST00000503942 CANXP27824 592 aaKnown RBP6.4□□□□□ -1.38
UBE3D-205ENST00000503942 ECI1P42126 302 aa6.4□□□□□ -1.38
UBE3D-205ENST00000503942 MAP4K2Q12851 820 aa6.4□□□□□ -1.38
UBE3D-205ENST00000503942 PRKD1Q15139 912 aaPredicted RBP6.4□□□□□ -1.38
UBE3D-205ENST00000503942 CHRNA2Q15822 529 aa6.4□□□□□ -1.38
UBE3D-205ENST00000503942 NTRK3Q16288 839 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms