RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 BARX2Q9UMQ3 279 aaPredicted RBP18.41■□□□□ 0.54
PDLIM7-210ENST00000503827 CACNA1HO95180 2353 aa18.41■□□□□ 0.54
PDLIM7-210ENST00000503827 PLXNA4Q9HCM2 1894 aa18.4■□□□□ 0.54
PDLIM7-210ENST00000503827 DGKIO75912 1065 aa18.4■□□□□ 0.54
PDLIM7-210ENST00000503827 ITGB1P05556 798 aa18.4■□□□□ 0.54
PDLIM7-210ENST00000503827 GHRP10912 638 aa18.4■□□□□ 0.54
PDLIM7-210ENST00000503827 DNAJB1P25685 340 aa18.4■□□□□ 0.54
PDLIM7-210ENST00000503827 HAND2P61296 217 aa18.4■□□□□ 0.54
PDLIM7-210ENST00000503827 ARHGAP4P98171 946 aa18.4■□□□□ 0.54
PDLIM7-210ENST00000503827 PGM5Q15124 567 aa18.4■□□□□ 0.54
PDLIM7-210ENST00000503827 PTPN21Q16825 1174 aa18.4■□□□□ 0.54
PDLIM7-210ENST00000503827 ASPRV1Q53RT3 343 aa18.4■□□□□ 0.54
PDLIM7-210ENST00000503827 STOX1Q6ZVD7 989 aa18.4■□□□□ 0.54
PDLIM7-210ENST00000503827 ASCL5Q7RTU5 278 aa18.4■□□□□ 0.54
PDLIM7-210ENST00000503827 RBM23Q86U06 439 aaKnown RBP18.4■□□□□ 0.54
PDLIM7-210ENST00000503827 ZKSCAN3Q9BRR0 538 aa18.4■□□□□ 0.54
PDLIM7-210ENST00000503827 PTPRZ1P23471 2315 aaPredicted RBP18.4■□□□□ 0.54
PDLIM7-210ENST00000503827 KDM4AO75164 1064 aa18.39■□□□□ 0.53
PDLIM7-210ENST00000503827 GLP2RO95838 553 aa18.39■□□□□ 0.53
PDLIM7-210ENST00000503827 CHRNA1P02708 482 aa18.39■□□□□ 0.53
PDLIM7-210ENST00000503827 ATF7P17544 494 aaPredicted RBP18.39■□□□□ 0.53
PDLIM7-210ENST00000503827 CCND2P30279 289 aa18.39■□□□□ 0.53
PDLIM7-210ENST00000503827 GHRHRQ02643 423 aa18.39■□□□□ 0.53
PDLIM7-210ENST00000503827 POF1BQ8WVV4 589 aa18.39■□□□□ 0.53
PDLIM7-210ENST00000503827 ESR2Q92731 530 aa18.39■□□□□ 0.53
PDLIM7-210ENST00000503827 AMNQ9BXJ7 453 aa18.39■□□□□ 0.53
PDLIM7-210ENST00000503827 RNF41Q9H4P4 317 aaPredicted RBP18.39■□□□□ 0.53
PDLIM7-210ENST00000503827 KAT14Q9H8E8 782 aa18.39■□□□□ 0.53
PDLIM7-210ENST00000503827 EHMT1Q9H9B1 1298 aa18.39■□□□□ 0.53
PDLIM7-210ENST00000503827 ZNF215Q9UL58 517 aaPredicted RBP18.39■□□□□ 0.53
PDLIM7-210ENST00000503827 MRPL42Q9Y6G3 142 aaKnown RBP18.39■□□□□ 0.53
PDLIM7-210ENST00000503827 GALR2O43603 387 aaPredicted RBP18.38■□□□□ 0.53
PDLIM7-210ENST00000503827 ADAM17P78536 824 aa18.38■□□□□ 0.53
PDLIM7-210ENST00000503827 CCDC178Q5BJE1 867 aa18.38■□□□□ 0.53
PDLIM7-210ENST00000503827 ZBTB33Q86T24 672 aa18.38■□□□□ 0.53
PDLIM7-210ENST00000503827 CMTR2Q8IYT2 770 aaKnown RBP18.38■□□□□ 0.53
PDLIM7-210ENST00000503827 SAMD3Q8N6K7 520 aa18.38■□□□□ 0.53
PDLIM7-210ENST00000503827 KLHL23Q8NBE8 558 aa18.38■□□□□ 0.53
PDLIM7-210ENST00000503827 LMBR1Q8WVP7 490 aa18.38■□□□□ 0.53
PDLIM7-210ENST00000503827 GPKOWQ92917 476 aaPredicted RBP eCLIP18.38■□□□□ 0.53
PDLIM7-210ENST00000503827 RIPOR3Q96MK2 946 aa18.38■□□□□ 0.53
PDLIM7-210ENST00000503827 JMJD4Q9H9V9 463 aa18.38■□□□□ 0.53
PDLIM7-210ENST00000503827 TRPC6Q9Y210 931 aa18.38■□□□□ 0.53
PDLIM7-210ENST00000503827 ZMYM6O95789 1325 aa18.38■□□□□ 0.53
PDLIM7-210ENST00000503827 PRR23AA6NEV1 266 aa18.37■□□□□ 0.53
PDLIM7-210ENST00000503827 OPLAHO14841 1288 aa18.37■□□□□ 0.53
PDLIM7-210ENST00000503827 MX1P20591 662 aa18.37■□□□□ 0.53
PDLIM7-210ENST00000503827 LPIN1Q14693 890 aa18.37■□□□□ 0.53
PDLIM7-210ENST00000503827 MCMDC2Q4G0Z9 681 aa18.37■□□□□ 0.53
PDLIM7-210ENST00000503827 RSPH3Q86UC2 560 aa18.37■□□□□ 0.53
PDLIM7-210ENST00000503827 IQCA1Q86XH1 822 aa18.37■□□□□ 0.53
PDLIM7-210ENST00000503827 IL31RAQ8NI17 732 aa18.37■□□□□ 0.53
PDLIM7-210ENST00000503827 OTUD7AQ8TE49 926 aaPredicted RBP18.37■□□□□ 0.53
PDLIM7-210ENST00000503827 ZFP91Q96JP5 570 aaPredicted RBP18.37■□□□□ 0.53
PDLIM7-210ENST00000503827 TLE6Q9H808 572 aa18.37■□□□□ 0.53
PDLIM7-210ENST00000503827 NRCAMQ92823 1304 aa18.37■□□□□ 0.53
PDLIM7-210ENST00000503827 FSD2A1L4K1 749 aa18.36■□□□□ 0.53
PDLIM7-210ENST00000503827 PARP1P09874 1014 aaKnown RBP18.36■□□□□ 0.53
PDLIM7-210ENST00000503827 HOXA13P31271 388 aaPredicted RBP18.36■□□□□ 0.53
PDLIM7-210ENST00000503827 NEDD9Q14511 834 aa18.36■□□□□ 0.53
PDLIM7-210ENST00000503827 GNPTABQ3T906 1256 aa18.36■□□□□ 0.53
PDLIM7-210ENST00000503827 TAF2Q6P1X5 1199 aa18.36■□□□□ 0.53
PDLIM7-210ENST00000503827 METTL7BQ6UX53 244 aa18.36■□□□□ 0.53
PDLIM7-210ENST00000503827 EVI5LQ96CN4 794 aa18.36■□□□□ 0.53
PDLIM7-210ENST00000503827 GPR20Q99678 358 aa18.36■□□□□ 0.53
PDLIM7-210ENST00000503827 BCAS3Q9H6U6 928 aa18.36■□□□□ 0.53
PDLIM7-210ENST00000503827 LOXHD1Q8IVV2 1947 aa18.35■□□□□ 0.53
PDLIM7-210ENST00000503827 TRIM6-TRIM34B2RNG4 842 aa18.35■□□□□ 0.53
PDLIM7-210ENST00000503827 NBL1P41271 181 aa18.35■□□□□ 0.53
PDLIM7-210ENST00000503827 ID4P47928 161 aa18.35■□□□□ 0.53
PDLIM7-210ENST00000503827 NT5C2P49902 561 aa18.35■□□□□ 0.53
PDLIM7-210ENST00000503827 MGAT3Q09327 533 aa18.35■□□□□ 0.53
PDLIM7-210ENST00000503827 UTP14CQ5TAP6 766 aaKnown RBP18.35■□□□□ 0.53
PDLIM7-210ENST00000503827 CYFIP1Q7L576 1253 aa18.35■□□□□ 0.53
PDLIM7-210ENST00000503827 TRIM50Q86XT4 487 aa18.35■□□□□ 0.53
PDLIM7-210ENST00000503827 TBC1D10CQ8IV04 446 aa18.35■□□□□ 0.53
PDLIM7-210ENST00000503827 MICAL1Q8TDZ2 1067 aa18.35■□□□□ 0.53
PDLIM7-210ENST00000503827 SUSD6Q92537 303 aa18.35■□□□□ 0.53
PDLIM7-210ENST00000503827 NEK1Q96PY6 1258 aa18.35■□□□□ 0.53
PDLIM7-210ENST00000503827 SUPT16HQ9Y5B9 1047 aaKnown RBP18.35■□□□□ 0.53
PDLIM7-210ENST00000503827 PDGFBP01127 241 aaPredicted RBP18.34■□□□□ 0.53
PDLIM7-210ENST00000503827 STAG3L1P0CL83 205 aa18.34■□□□□ 0.53
PDLIM7-210ENST00000503827 PAN2Q504Q3 1202 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-210ENST00000503827 FBXO47Q5MNV8 452 aa18.34■□□□□ 0.53
PDLIM7-210ENST00000503827 TSHZ1Q6ZSZ6 1077 aa18.34■□□□□ 0.53
PDLIM7-210ENST00000503827 NPAS4Q8IUM7 802 aa18.34■□□□□ 0.53
PDLIM7-210ENST00000503827 FAM227BQ96M60 508 aa18.34■□□□□ 0.53
PDLIM7-210ENST00000503827 PCDHA1Q9Y5I3 950 aa18.34■□□□□ 0.53
PDLIM7-210ENST00000503827 FAM186AA6NE01 2351 aa18.34■□□□□ 0.53
PDLIM7-210ENST00000503827 NEDD4P46934 1319 aa18.33■□□□□ 0.53
PDLIM7-210ENST00000503827 GCOM1H8Y6P7 765 aaPredicted RBP18.33■□□□□ 0.52
PDLIM7-210ENST00000503827 PER2O15055 1255 aa18.33■□□□□ 0.52
PDLIM7-210ENST00000503827 POLR2MP0CAP2 368 aa18.33■□□□□ 0.52
PDLIM7-210ENST00000503827 SRGAP2BP0DMP2 458 aa18.33■□□□□ 0.52
PDLIM7-210ENST00000503827 RUFY4Q6ZNE9 571 aa18.33■□□□□ 0.52
PDLIM7-210ENST00000503827 FCHSD1Q86WN1 690 aa18.33■□□□□ 0.52
PDLIM7-210ENST00000503827 ATP8B4Q8TF62 1192 aa18.33■□□□□ 0.52
PDLIM7-210ENST00000503827 CDCA3Q99618 268 aaPredicted RBP18.33■□□□□ 0.52
PDLIM7-210ENST00000503827 FTHL17Q9BXU8 183 aa18.33■□□□□ 0.52
PDLIM7-210ENST00000503827 PCDHGC5Q9Y5F6 944 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms